Anaerocolumna cellulosilytica: acsn021_20310
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Entry
acsn021_20310 CDS
T06764
Name
(GenBank) RNA-splicing ligase RtcB
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
acel
Anaerocolumna cellulosilytica
Brite
KEGG Orthology (KO) [BR:
acel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
acel03016
]
acsn021_20310
Enzymes [BR:
acel01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
acsn021_20310
Transfer RNA biogenesis [BR:
acel03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
acsn021_20310
Prokaryotic type
tRNA splicing ligases
acsn021_20310
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
BLYB
YopJ_bacilli
Motif
Other DBs
NCBI-ProteinID:
BCJ94462
UniProt:
A0A6S6R4S6
LinkDB
All DBs
Position
2500358..2501569
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AA seq
403 aa
AA seq
DB search
MNKITGKCNTAIIYTEVLEETARKQIQTLCNQEFIKESKIRIMPDVHAGAGCTIGTTMTI
TDKIVPNLVGVDIGCGMETIRIKNKHLELEKLDKLIYERIPSGFGIRETPHKYNEEIDLN
QLRCLQTGKLNINRAQKSLGTLGGGNHFIEVNKDEEGNMYLIIHSGSRHLGLEIATFYQE
EAYRSLHGNSQADIAQLIEEYKQAGREKEIEQAVESMKKELHMDIPKPLSYATGQLFEDY
IHDMKIIQQFAMLNRKAMMCELIKGMKLKVEEEFTTIHNYIDTEQMILRKGAVSAKAGEQ
ILIPINMRDGSLICIGKGNEEWNFSAPHGAGRLMSRSAAKNSFTVSEFKKVMKGIYTSSV
NKETLDECPMAYKSMEDILSNIKETVELVKVIKPIYNFKAGAE
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaataacaggaaaatgcaatacagcaattatttatacagaagttttagaagaa
acggcacgaaaacaaattcagaccttgtgtaaccaggaatttataaaggaatctaaaata
cggataatgccggatgtccatgccggtgccggttgtactattggcacaacaatgacaata
actgataagattgtaccaaatcttgttggtgttgatattggatgcggtatggaaacaatc
agaattaaaaacaaacatcttgaattagaaaaacttgacaaattaatatacgaaagaata
ccatccggttttggtatacgtgaaactccccataaatataatgaggagattgatttaaac
cagcttagatgtttacagacaggtaaattaaatattaatagggcacaaaaaagtttagga
actctaggaggtggaaatcattttatagaagtgaataaggatgaggaaggaaacatgtat
cttattattcactctggcagcagacatttaggattagaaatagccactttttatcaagaa
gaagcatatcgttctttacatgggaattctcaagctgatatagcacaattaattgaggaa
tacaagcaggcagggcgagaaaaagagattgagcaggcggtagagagcatgaaaaaggag
ttgcatatggatatacctaaaccactctcatatgcaaccgggcaactttttgaagattat
attcatgacatgaagattattcagcaatttgccatgttaaaccggaaggctatgatgtgt
gaattaataaaaggcatgaagttaaaggtggaggaggagtttaccacgattcacaactat
atagatactgaacagatgatactacgtaaaggtgcagtttcagcaaaagcaggggagcaa
atattaattcccattaatatgagggacggttcacttatttgtatcggaaaaggaaacgaa
gaatggaatttttctgcaccacatggtgctggaagattaatgtctagaagcgcagctaag
aattcttttacagtttcggaatttaaaaaagtaatgaagggaatttatacatcctctgtc
aataaagaaactttagatgaatgtcctatggcatacaaaagcatggaggatattcttagt
aatataaaggaaaccgtagagttagtaaaagtaattaaacccatctataattttaaggcc
ggtgcggaatag
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