Anaerocolumna cellulosilytica: acsn021_25060
Help
Entry
acsn021_25060 CDS
T06764
Symbol
rnj
Name
(GenBank) ribonuclease J
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
acel
Anaerocolumna cellulosilytica
Pathway
acel03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
acel00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
acsn021_25060 (rnj)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acel03019
]
acsn021_25060 (rnj)
Messenger RNA biogenesis [BR:
acel03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
acsn021_25060 (rnj)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
RMMBL
Lactamase_B
Lactamase_B_2
Anti-Pycsar_Apyc1
Lactamase_B_6
Lectin_like
SIS_2
Motif
Other DBs
NCBI-ProteinID:
BCJ94937
UniProt:
A0A6S6R4G1
LinkDB
All DBs
Position
complement(3060695..3062368)
Genome browser
AA seq
557 aa
AA seq
DB search
MKENITDLKGVKVIPLGGLEQIGMNITAFEYEDSIIVVDCGLSFPEDEMLGIDLVIPDVT
YLKENINKVKGFVITHGHEDHIGALPYILRDINVPIYATKLTIGIIENKLKEHNLLKSTK
RKVIKYGQSINLGCFRIEFIRSNHSIADAAALAIFTPAGLIVHTGDFKVDYTPVFGNTID
LQRFGELGKKGVLALMCDSTNVERPGYTMSERTVGKTFDNIFAENTRSRIIVATFASNVD
RVQQIINSAEKYDRKVVVEGRSMVNIIATASELGYLTIPSNIMIDVEQMKNYPDDKLVLI
TTGSQGEAMAALPRMAASIHKKVSIKPGDTVIFSSTPIPGNEKPIFKVINELSMKGAKVI
FQDTHVSGHACQEEIKLIYALTKPKYSIPVHGEYRHLKKHAELAQSMGVPKENVFVVSSG
DVLELSSEKAGVVGKVQAQGILVDGLGVGDVGNIVLRDRQHLSENGLLIVVVTLEKYTNQ
ILSGPDIVSRGFVYVRESENLMDEAKVVVSDALEKCLSRNTTDWGKMKNEIKDSLSDYLW
KKTKRNPMILPIIMEVN
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
ttgaaagaaaatattacagatttaaagggagtaaaagttattcccttaggtggattagaa
caaatagggatgaatataacagcatttgagtatgaggacagcattatagttgttgactgc
ggtttatcctttccggaagatgagatgctaggaattgatttggttattcctgatgtaaca
tatttaaaagaaaacataaataaagtaaaaggctttgttattacacacggccacgaagac
catattggggcattaccttatattttaagggatattaatgtacctatttatgcgactaag
ctgacgataggaataatcgagaataaattaaaagagcataatttgttaaaatctacaaag
cgcaaagttattaaatatggacaatctataaatcttggctgttttcgaattgaattcatc
cgcagcaatcacagcattgctgatgcggcagcacttgctattttcactccggccggactc
attgttcatacaggagattttaaagtggattatacgcccgtatttggcaataccattgat
ttgcaacgctttggtgaattgggcaaaaaaggtgttttagcacttatgtgtgatagtact
aatgtggaaagacctggatacactatgtcagagaggaccgttggaaagacctttgataat
atatttgcagaaaatacccgcagcaggattatcgttgcaacctttgcttctaatgttgac
agagttcagcagataattaattctgctgagaaatacgatagaaaagtagtagtagaggga
agaagcatggttaatattattgctactgcttcagagttgggttacttaaccatccctagt
aacattatgattgatgttgagcagatgaaaaattatccggatgataagcttgtgttaata
accaccggcagtcagggagaagcaatggcagctcttcctaggatggcagcatccattcat
aagaaggtgtccattaagcctggtgacacggtaatctttagctcaacaccaattccgggt
aatgaaaaacctatatttaaagtcattaatgagctttccatgaaaggtgcgaaggtcata
ttccaggatacgcatgtatccggtcatgcctgccaggaagaaattaaactcatatatgca
ttgaccaaacctaaatattctattccggttcatggtgaatatagacacttgaagaaacat
gcagaattggcacagtctatgggtgtacctaaagaaaatgtatttgtagtttcttctggt
gatgtactggaactttcctctgaaaaagcaggagttgtcggaaaagtacaggcacaaggt
atccttgtagatggcttaggtgttggtgatgtaggaaatattgttcttagagacaggcag
cacttatctgaaaatggtcttttaatcgtagtcgttacgctggaaaagtacaccaatcag
atattgtccggtccagatattgtatcccgtggctttgtatatgtaagagagtcagaaaat
cttatggatgaagcaaaggtggttgtaagtgatgcactggaaaaatgtctcagcaggaat
acaactgactggggtaagatgaaaaatgaaattaaggattctctaagtgactacctatgg
aagaagacgaagagaaatcctatgatactcccgattatcatggaagtaaattaa
DBGET
integrated database retrieval system
