Anaerocolumna cellulosilytica: acsn021_30600
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Entry
acsn021_30600 CDS
T06764
Name
(GenBank) hypothetical protein
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
acel
Anaerocolumna cellulosilytica
Brite
KEGG Orthology (KO) [BR:
acel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
acel03016
]
acsn021_30600
Enzymes [BR:
acel01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
acsn021_30600
Transfer RNA biogenesis [BR:
acel03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
acsn021_30600
Prokaryotic type
tRNA splicing ligases
acsn021_30600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
Flavodoxin_NdrI
DUF188
Motif
Other DBs
NCBI-ProteinID:
BCJ95491
UniProt:
A0A6S6R9B7
LinkDB
All DBs
Position
complement(3699241..3700473)
Genome browser
AA seq
410 aa
AA seq
DB search
MFVLANENTRVPIKIWLPDEKSIDESCLRQAYNLSKLPFLHQWVSLMPDTHAGMGMPIGG
VIAAEEVIIPNAVGVDIGCGMAFTGTNIPVAAIRDIQTGSGNLIQAIVGDILRNVPVGFH
HHKHQQPCNTLERAFDEFDKYENNAELLGQLEAGFYQVGTLGGGNHFIELQEDEAGFLGI
MIHSGSRNFGKQVCDAFHSIARELNKKWQSTVPDEYRLAFLPTDSPEGCQYINWMQLALD
FAEENRLRMMLAVKAILEKWIGKYIGLNIEYLVEINCHHNYASLEHHYDKDVWVHRKGAT
RAEKGELAVIPGAMGSYSYVVEGLGNSMSFHSSSHGAGRRYSRKSAMANFTTEEVMTDLQ
KQGVILGKHKKYDVAEESRFAYKNIDEVMENQSDLVKPVKRLKTIGVVKG
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atgtttgtacttgcaaatgaaaatacccgtgtcccaattaaaatatggctgcctgatgaa
aaaagcattgatgaaagctgccttcggcaggcatacaacctatcaaaattgcctttctta
caccaatgggtttcccttatgccggatactcatgcgggaatgggaatgccaattggaggt
gttattgctgctgaggaggttattattcctaacgctgttggagtagatatcggctgtgga
atggcttttacagggacgaatataccggtagctgctatcagggatattcaaaccggtagc
ggcaacttaattcaggcaatagtaggtgatatcctaagaaatgttccagtgggctttcac
catcataagcaccagcaaccctgtaataccttggaacgggcttttgatgagtttgataaa
tacgaaaataatgcagaattattagggcaactagaagcggggttttatcaagtgggtact
cttggcggaggaaaccattttattgaattacaagaggatgaagctggattcttaggaatt
atgattcattctggaagccgtaattttggtaaacaagtttgtgatgcttttcacagtatt
gcccgagagctgaataaaaaatggcaaagtacagtaccggatgaataccgccttgcattt
ttaccaacggattcaccggagggctgtcaatatattaactggatgcagcttgcactggat
tttgcagaggaaaatcgtcttcggatgatgttggctgtcaaggcaattttagaaaagtgg
attggtaaatatattggtttaaatatagaatatttagttgaaatcaattgccatcacaat
tatgcttctcttgaacatcactatgataaggatgtatgggttcaccgaaaaggtgctaca
agggctgaaaaaggagagttagccgttatacccggcgcgatgggttcctatagttatgtg
gtggaaggactaggaaatagtatgagttttcattcatcctcccatggggcaggtagaagg
tactcaagaaaaagcgccatggcaaactttacaacagaagaagttatgaccgacttgcaa
aagcagggagtcatacttgggaaacataagaaatatgatgtagcggaggaaagccgtttt
gcatacaaaaacattgatgaggttatggagaatcagagtgatttagtaaaaccagtgaaa
cgtctgaaaaccattggtgtggttaaaggatag
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