Anaerocolumna cellulosilytica: acsn021_43480
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Entry
acsn021_43480 CDS
T06764
Name
(GenBank) RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
acel
Anaerocolumna cellulosilytica
Pathway
acel03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
acel00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
acsn021_43480
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acel03019
]
acsn021_43480
03009 Ribosome biogenesis [BR:
acel03009
]
acsn021_43480
Enzymes [BR:
acel01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
acsn021_43480
Messenger RNA biogenesis [BR:
acel03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
acsn021_43480
Ribosome biogenesis [BR:
acel03009
]
Prokaryotic type
rRNA helicases
acsn021_43480
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
DeaD_dimer
ResIII
AAA_19
CMS1
Cas3-like_C_2
CobA_CobO_BtuR
NAT10_TcmA_helicase
Motif
Other DBs
NCBI-ProteinID:
BCJ96779
UniProt:
A0A6S6R609
LinkDB
All DBs
Position
complement(5222597..5224189)
Genome browser
AA seq
530 aa
AA seq
DB search
MAVKFEELGIAEPILKAIVEMGFEEASPIQANAIPIVLEGKDIVGQAQTGTGKTAAFGIP
LLQSIDPKNKHLQAVVLSPTRELAIQIADEIRKLAAFMHGIKILPIYGGQEISRQIRSLK
AGTQIVIGTPGRVMDHMRRKTVKFEDVKLVVLDEADEMLNMGFREDIETILKEIPEERQT
VLFSATMPKPIMDIARTYQKDAQIVKVVKKELTVPKIEQYYYEVKPKNKDEVLCRLLDMH
DPKLSLVFCNTKKQVDELVSVLQGRGYFAEGLHGDLKQQQRDRVMNSFRNGKTEILVATD
VAARGIDVDDVEAVFNYDVPQDDEYYVHRIGRTGRAGRTGRAFTLVVGKEVYKLKDIQRY
CKTKIIAQPIPSINDVTAVKAEKILDRVQDIITNEDLTKMIEVVEAKVNMADCTALDIAA
AFLKMTMGDENEAIEDNSNSHQDYGDTGAEAGMVRLFINIGKKQNTRPGDILGAIAGETG
MPGKLIGSIDMYDKYTFVEVPREYASDVIQVMKDAKIKGKNINIEPANRK
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atggcagttaaatttgaagaattaggaatcgctgagccgatattaaaagctattgttgag
atggggtttgaagaagcctctcccatacaggcaaatgctattcccattgtattagaaggt
aaggatattgtggggcaagcgcagacaggtacaggtaaaacagcagcttttggtattccc
ttattacaatctatagatcctaaaaataaacatttacaggcagtcgtattaagccctacc
agagagctggctatacagattgcagatgaaataagaaaattagcagcttttatgcatgga
ataaagatacttcctatctatggtggacaggagatttcaagacagattcgttccttaaag
gcaggcacccagattgtaattggaacacctggccgtgttatggatcatatgagaagaaag
accgttaagtttgaggatgtaaagttagttgtattagatgaagcagatgaaatgcttaac
atgggatttcgtgaagatatcgaaacaatccttaaggaaataccggaagaaagacagacg
gttttattttccgcaactatgcctaagcctatcatggatattgcgagaacctatcagaaa
gatgcacagattgttaaggtagtgaaaaaggaacttactgtgcctaagattgagcaatat
tactatgaagtaaaacctaagaataaagatgaggttttatgcaggttattggatatgcat
gatcctaagttatctctggtattttgtaatacaaaaaaacaagtggatgaactggtctct
gttttacaaggcaggggatattttgcggaaggtcttcatggtgatttgaaacagcagcag
cgtgaccgtgttatgaacagcttccgtaacggaaagacggaaattctcgtagctacagat
gttgcagccagaggtattgatgttgatgatgtagaagctgtatttaactacgatgttcct
caggatgatgaatattatgttcaccgtatcggaagaactggaagagccggaagaactgga
agagcctttacgcttgttgttggtaaagaagtatataaactaaaagatatacaaagatat
tgtaaaacaaagatcattgcacagcctattccgtcaattaatgatgtaacagcggtaaag
gctgaaaaaatcctagaccgtgttcaagacatcatcacaaatgaagatttaacaaaaatg
attgaagtggttgaagcaaaggttaatatggcggactgtacagctttagatatcgcagca
gctttcttaaaaatgaccatgggtgatgaaaacgaagcgattgaagataacagcaacagc
catcaagattatggcgatactggtgcggaagctggcatggtaagactttttatcaatatc
ggtaagaaacaaaataccagaccgggtgatattcttggtgcaattgcaggagaaacagga
atgcccggaaaattaatcggttccattgatatgtatgataaatatacgtttgtagaagtc
ccaagggaatatgcttccgatgtgattcaagtcatgaaggatgcaaaaatcaagggtaag
aacattaatatagaaccggctaacagaaagtaa
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