Atta cephalotes (leaf cutting ant): 105617056
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Entry
105617056 CDS
T04923
Name
(RefSeq) LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding protein 1
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
acep
Atta cephalotes (leaf cutting ant)
Brite
KEGG Orthology (KO) [BR:
acep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
acep03021
]
105617056
03036 Chromosome and associated proteins [BR:
acep03036
]
105617056
Transcription machinery [BR:
acep03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
105617056
Chromosome and associated proteins [BR:
acep03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
105617056
SLIK complex
105617056
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
CDH1_2_SANT_HL1
HTH_Hrp3
Helicase_C
CHD1-like_C
Chromo
HDA2-3
ResIII
DEAD
Myb_DNA-binding
Motif
Other DBs
NCBI-GeneID:
105617056
NCBI-ProteinID:
XP_012054025
UniProt:
A0A158N917
LinkDB
All DBs
Position
Unknown
AA seq
1831 aa
AA seq
DB search
MIDFQKTLESESGKESGSDSENESKSDSSSSGSNSGSGSGSESDSSSSSGSGSGSGSDSE
KSEKSDAPAAQSDSFQSKGSNHSTEAKLRVKHESSREWDENPDIYGIRRSGRSRKEPDRL
ATNRESDSDGRKKFKKKSSHNSWNSESSDSESDETENRRPPPSKSLNRRAAQKAKEKARV
RKKRISDSSDNSSFDSDDNRRQINRRAGTAVSYKEESEEGTDSEDLVEVDESTAASTEPD
NAETIEQILGQRMGKKGVTGNITTIYAVEDNGDPNPEDLSNLETEVQYLIKWKGWSHIHN
TWESDESLKAQKVKGLKKLDNFIKRERVIEYTREHAEPEELDYLECQLELKQDLLKSYNN
VERIIADYKKPDSVYPDYFCKWENLSYAEATWEDGILIVKKWPEKIKEFCDREDSKRTPS
KHCKVLKSRPKFYQLNEQPTYMGKEKDLILRDYQMDGLNWLIHSWCKENSVILADEMGLG
KTIQTICFLYYLFHTQHLHGPFLLVVPLSTMTSWQREMSQWAPDINFVTYLGDINSRNVI
REYEWCYQDSKRLKFNVILTTYEIVLKDKTFLGALNWAVLLVDEAHRLKNDDSLLYKALT
EFHTNHRLLITGTPLQNSLKELWALLHFIMPSKFASWEEFEKQHDNAAQKGYSKLHKQLE
PFILRRVKKDVEKSLPAKVEQILRVEMTSVQKQYYKWILTKNYEALRKGVKGSTTTFLNI
VIELKKCCNHAFLTKPIDAEREKTNEDYLQQLIRGSGKLVLLDKLLVRLRDTGHRVLIFS
QMVRMLDILGEYLQRRHFPFQRLDGSIKGELRKQALDHFNAEGSQDFCFLLSTRAGGLGI
NLATADTVIIFDSDWNPQNDLQAQARAHRIGQKNKVNIYRLVTKKSVEEEIVERAKQKMV
LDHLVIQRMDTTGRTVLDKKNAGTNSNPFNKEDLNAILKFGAEDLFKDEEDGDEEPTCDI
DEILRRAETRDEGPTTVGDELLSAFKVASFKTAFEEDLEPINQPNDNDDESKDWAEIIPE
NFRRKVEEEEKSKEMEDLYLPPRSRKTLQQLNQSEGKGKKRKKVQDDSEDGEESGSEAEG
SDDDRPKKRGRPRVTPRENIKSFTDIEIRRFIKSYKKFPAPLKRLEDIATDADLQEKPMT
ELRFLGEQLMSRCDACLVEFENTAKENKGGEEEGKGPGRKRGRGPTFKIGGVMVNAKSFS
AAVKELEPLEQALPSDPEQRANWHLDIKLKPANFECEWTSEDDARLLKGIYQHGMGSWEA
IKTDTSLKLGDKIFPNGNKVQLKRVNARAEYLLKILKKQIDLKLGVTRMRKPRKPKEVKA
ITKEIVEDNDSSGDENKKSKSKIDKSSVKKEDENVTKKDIKEEIDDVPDEKKKDKKVKKE
KKDNKKVKKNKQAAGPMHFTANNEPRAVDVIGELDPPVFDECKEKMRPVKKALKALDTPD
MSLSEEERVARARRSLYQIGNHIDSCLAEYKTPEQSKEWKSNLWYFASKFTTFKAKKLYR
MYKNLIKKRMDSNGGATSSPDKKEDTSSITKKHNLEKISHEKHFDKQQADNSNKDSRIMK
RKVDDIEENSNSSTQSKKHLSSISAVSSNISSTSTVTIGAITITPITSTPNSTSNTTNSA
DTSRHKEQKESKHKDMKRDRDRDRDRDRGHDRGDRLSMNKDDRIRRDGGYNMGHYSGSRE
DDHWLSRDGRDMRDSRFGDHKRDRFDLYSRMSGGYHRDRDRDRDRGMHMNDKRRXGIAHL
YIHLIYFMNFVSMSMFFSDYYRYSSGPPSYGYGPGGYGGSSGGGGYPPTDIASSHFRSRG
YAGDGYSNDWRPNKDYRRDYDRRPPPPNANS
NT seq
5496 nt
NT seq
+upstream
nt +downstream
nt
atgattgacttccagaaaacattagaatccgaatctggtaaggaatccggatctgattct
gagaatgagagtaaaagcgatagctcttcttccggcagtaacagcggttcaggatctgga
tctgaaagcgactctagctcctcgagtggttctggttccggatcaggctccgactcggaa
aagtcggagaagtcggatgcacctgctgcacaaagcgatagcttccagagcaaaggctcg
aatcacagcaccgaagcaaagcttagagttaaacatgagtctagtcgcgagtgggacgag
aatcctgacatatacggcattaggaggtccgggcgttccaggaaagaacctgataggctc
gcaacgaatcgcgagagcgacagtgatggtcgcaaaaagtttaagaagaaaagttcacac
aattcgtggaattcagaaagttcagattcagaatctgatgaaactgagaatcgtagacct
ccacctagcaaatccttgaacagacgcgcggcacaaaaagcaaaagagaaagccagagtg
cgaaagaaacgtatttctgattcttctgataattcttcctttgacagtgatgataataga
aggcaaattaatagacgggcaggtacggcagttagttataaagaggaaagtgaagaaggt
actgatagcgaagatttggttgaagttgacgaatcgaccgctgcgtcaacagaacctgac
aatgcagaaactattgaacaaattttgggacagaggatgggcaagaaaggagttaccggc
aacataacgacaatctacgctgtcgaagataatggtgatcctaatccagaggatttaagt
aatctggaaactgaagtacaatatttgatcaaatggaaaggctggtctcacatacataac
acatgggaatcagatgaatctttaaaagcacaaaaagtaaaaggattgaagaagttagac
aattttatcaaacgtgaacgtgtaattgaatatacgagagagcacgctgagccagaggag
ttggattatttagaatgtcaattggaacttaaacaagatcttctgaaaagttacaacaat
gttgagaggattattgctgattacaagaaaccagactcggtatatcctgattatttctgt
aaatgggaaaatttgtcatacgctgaagctacatgggaagatggaattttgatagtgaaa
aaatggccagagaagataaaagaattttgtgacagagaagattctaaaagaacaccgagc
aaacattgcaaagttctcaaatctagacctaagttttatcagttgaatgaacaacctact
tacatgggcaaggaaaaagatttaatattgagagattatcaaatggatggacttaattgg
ttgatacactcttggtgcaaagaaaatagtgttatattagccgatgaaatgggtctcggc
aaaacaatccaaacgatatgcttcctttattatttatttcacacgcaacaccttcacgga
ccatttttactagtagttcctctgtcaactatgacttcctggcaaagagagatgtctcaa
tgggcacctgacataaattttgtcacttacttgggtgacatcaattctcgtaatgtcatt
agggaatacgaatggtgctaccaggattcgaagagattgaagtttaacgtcattcttacg
acgtatgagatagtacttaaagataaaacatttttgggtgccttaaattgggcggtattg
ctagtagacgaagctcatcgattgaagaatgatgattctttattatacaaagcacttacc
gaatttcataccaatcatcgtttattgattactggtactccattacagaatagcttgaaa
gaactgtgggccttattacattttattatgccttcaaaatttgcttcttgggaagaattt
gaaaagcaacacgataatgctgcacaaaagggatactccaagttgcacaaacaattagaa
ccatttattctgcgtcgagttaagaaagatgttgaaaaatctttgcctgctaaagtcgaa
cagatcttacgagtagaaatgacgtctgtgcaaaaacaatattacaagtggatattgaca
aaaaattatgaagcattgcgaaaaggcgtgaaaggatctactacgacattcttaaacatt
gttattgaattgaaaaaatgctgtaatcacgcctttctcacgaaaccgattgatgccgaa
agggaaaagactaatgaagattatttgcaacaattaattcgtggttctggcaaattagtg
cttctagataaattactagtgagattgcgtgatacgggacacagagtactgatattcagt
caaatggtcagaatgttggatattcttggtgaatatctacaaaggaggcatttcccattc
caaagattagatggaagtataaagggggaattaagaaaacaagcgttggatcacttcaat
gctgaaggatcgcaagatttttgttttctattgtcgacgcgagccggtggtctcggcatt
aatcttgccactgcagacactgtgataatttttgattctgactggaatccgcaaaatgat
ttgcaggcacaggccagagcgcatcgaataggacaaaagaataaggtaaatatttatcga
ttggttactaaaaagtcagtcgaggaagaaattgttgaacgcgcgaagcaaaaaatggtc
ttagaccatttagtaatacagcgaatggatacaactggtaggacagtgttagataaaaag
aatgcaggaaccaatagtaatccatttaacaaagaagatttgaatgctattttaaaattt
ggcgccgaggatttgttcaaagacgaagaagatggagatgaggaaccaacttgcgatatt
gatgaaatattaagaagagctgaaacgagagatgaaggaccgacaacggttggcgatgaa
ttgttgtccgccttcaaagtcgccagttttaaaacagcatttgaagaggatttggaacct
attaatcagccaaatgataacgatgatgaaagtaaagattgggccgaaatcattccggag
aattttcgaaggaaggtagaagaggaggaaaagtccaaagaaatggaggatctgtatcta
ccaccgagaagtcggaaaactcttcagcaactcaatcagagcgaagggaaaggtaaaaag
cggaaaaaagtacaagatgatagtgaggatggcgaggaatcgggtagcgaagcggaagga
agcgatgatgatagacctaagaaaagaggcagaccgagagttacgccgcgcgagaatatc
aagagtttcactgatattgagatacgacggttcatcaagagttataaaaagtttccagcg
cctttaaaacgattagaagatatcgcaactgacgctgatttacaagagaaaccgatgaca
gaattgcgcttcttgggcgagcaattgatgtctagatgcgacgcatgtttagtagaattt
gagaataccgcgaaagaaaataaaggtggcgaagaagaaggcaaaggaccaggtcgtaaa
aggggacgaggacctacttttaagataggtggtgtaatggtgaacgcaaaatcattctca
gccgctgttaaagaactcgagcctttagaacaagctttgccatctgatcccgaacaacgt
gctaattggcatcttgatattaaattgaaaccagccaatttcgaatgcgaatggacttct
gaggatgatgctagactgttaaagggtatatatcagcatggcatgggttcatgggaggca
ataaaaacagatactagtttgaaactcggcgataagatttttcccaatggcaataaagta
caactcaaacgtgtgaatgcacgtgcggaatatctcttgaagattttgaagaagcaaatt
gatcttaagttaggagtgacgcgaatgaggaaaccgagaaagcccaaagaagtgaaagca
attaccaaagaaattgtagaagataatgatagctccggtgacgaaaataaaaaatcaaaa
tctaaaattgacaaatcttcagttaaaaaagaagatgaaaacgttacaaaaaaagatatc
aaagaagaaatcgatgatgtacctgatgaaaagaaaaaagataaaaaagttaaaaaggag
aaaaaagataacaaaaaggtgaaaaagaataagcaagccgcaggtcctatgcattttact
gcaaataatgaaccaagagctgttgatgtaatcggtgaattagatccgccagtatttgat
gagtgcaaagaaaagatgagaccagtaaagaaggcgttaaaggccttagatacaccagat
atgtctctgagcgaagaagagcgagttgctcgcgcacgtcgaagtctttatcaaattggg
aaccatatcgactcgtgtctggcggaatataaaacccctgaacaaagcaaagaatggaaa
agtaatctttggtactttgcttccaagtttacgaccttcaaagcgaaaaagctttacaga
atgtataagaatctaataaaaaaaaggatggacagcaatggcggtgccacatctagtcct
gataaaaaagaggatacttctagtattacaaagaaacacaatctggaaaagatatctcac
gagaaacatttcgataagcaacaggcagataacagtaataaagatagcagaataatgaaa
cgtaaagttgatgatatcgaagaaaactcgaatagcagtacgcaaagtaagaaacacctt
tcaagtatttccgctgtcagcagcaatatcagcagcacgtccacagttactatcggtgct
attacgattacgcctataacgtcaacgccaaattccacatcgaataccactaacagcgca
gatacatcgcgacataaagaacaaaaagaatcgaagcataaagatatgaaaagagataga
gatcgtgatagagatagagatagggggcatgacagaggtgatagattaagtatgaacaag
gatgatagaattaggagagacggtggatacaatatgggacattatagtggtagtagggaa
gatgatcattggttatccagagatggaagagatatgagagacagcagattcggagatcat
aagcgcgatcgcttcgatctttatagtcgaatgtcgggtggttatcacagggacagagac
agagatcgagatcgtggtatgcacatgaatgataaaagaaggtgaggaatagctcatctg
tacatacatctgatctatttcatgaattttgtttcaatgagtatgtttttcagtgattat
tatcgatactcgtcgggaccaccgagttacggatatggaccaggtggctatggaggtagc
agcggtggtggtggttatccgcccacggatattgcatcaagtcatttcagaagtcgtggt
tatgcaggagatggttactccaatgattggcggccgaataaagattacaggcgggactac
gatagaagaccaccgccgccaaacgccaactcctag
DBGET
integrated database retrieval system
