Atta cephalotes (leaf cutting ant): 105618779
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Entry
105618779 CDS
T04923
Name
(RefSeq) nucleoporin NUP188 homolog
KO
K14311
nuclear pore complex protein Nup188
Organism
acep
Atta cephalotes (leaf cutting ant)
Pathway
acep03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
acep00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
105618779
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acep03019
]
105618779
Messenger RNA biogenesis [BR:
acep03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
105618779
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup188_N
Motif
Other DBs
NCBI-GeneID:
105618779
NCBI-ProteinID:
XP_012055701
UniProt:
A0A158NDU3
LinkDB
All DBs
Position
Unknown
AA seq
1926 aa
AA seq
DB search
MEVAPMGNLPCSKDLWSIISGTTCCCAKETVEEEIKNATVLLKEGLQFFKPYTDASLQNI
SKRDPPPLQQMYDLINKLAPLLNLDATITWDLVCNFVSYEYRNCAETFASQLSDLTSIRA
LIDDIWNFYYSERVTLIKCLKLMIEYKDNKRHPHHKEFRKFLNEILVGNLLESIRKQIEA
LKFVNSPTRSQFCTEDHLHQLYNSTLIEMRELLHILTVIVQDVHIPSYEFAKFYGSIGGE
PRRLVSTKSHEDKEAITKKIEEIQYSQIALLLVTLDVDKHTGMDDWINDVRSNMQDIFEH
KCVRESSPQDGPLLLSWMLANYAIDPDNIDTLIRFRPFGIKAIQLDVFEYLRDLINCEMF
QEETHYAEVVRSSVYNLLSLMCVFMDEDRLSALNGIFDALAAIVKFPECATRFWAEQGDG
LWSIYKVAKELYPYKFEPLTKIAIGLASTIITSAKKIASELNNLQSLKIEVSRQRDCSKP
LQPYKADCIIQENSFTIASNCVREKINVLSDEKEVVLFHTKANYWNALHHKMEQLFSQAS
RGITHITVNGDNLPENVRLGLKLLEALLAKDIEIPSSIVIPTELSFEIINRFSYPALPTN
LYKIIAVCISISSKLVLRYPEDILSRTRSGVYPKFNNWNQKPLYFAEAISFDGGLIASWL
SGIETIEHTYPILCAFLDTLYNYLIAKHSKEAMYTIEIPGMVFLLQAVLPKLDSWYFESN
AERIDLWLKSMFCIHRALDSTLPKDDIRNELQLVVVYSLLYLEPRHALLKLLRTGERTLH
NKMISETNWINGKGFKTIKSVELALSIVNRLLMFRKSLGLELGDRSPLEIALYSSPRVPN
GLLIVPTIVNYLYVWFSPSLQKMAVRLLKKFAEEFSMSLLVCMGMDGTSIRETFAFRLTL
PTCAIEVKVAILELVAVCLEKQPGLTEALFNIMHQAERKRIFPRPADEFLTEGCSQFLDS
YLERMYKEDDIVCDKLYDSTMTVLRAMWYHRNEILVNFFRKREKFWSHLFAPLFKTLVAG
AKGYSQLLDVITLELYKSPLLENNFSKSLKELLDKSKDHWKKLAMYVLDVPANNENEKEQ
HTKQDKLIEPLYEINLESWYHFIVMLTDDRTAKNYPINVTQAHLLTQLALDSLLERVKEP
NDSSSGKIPMLLASLSLRCITSWKQMCVGDSRIFKTRLSQLTQEIAQTYRGFGKALRQTM
ISLLLGCVQLVKSTLAEDSASLEYLLAHSCTIAIYELEELKKAALQLEHRKQQFSVTLTT
DEKDTQKKADCYSAETLRGIRESLPATLAISMVTQLLRSYVERNANFKHRLRASCVQLRQ
MIPELMVCVGYTLQKYPYLKFSTAALSLLGVISRSPYCPYPINDNDIAKLWLSLIPPADI
SNSMLDSLYDDSVNGQWRCQDWWPLYTLGLEFLIGLVSSETHMMFVNHVVVFLNSHEHQL
MVVSTLLRHTADLLAADLIQSLVALIHATATQIYIWNAIQPSVRETLIKCMYLAYDSTVN
LLLRPRILKFIIDGISVESAEELESCDSRLPSGELKLLVNKLIVINTTCALSFVHFSPKL
NTLVDTIYTQDYWYTPMAEMNFGPPQMSMSSGPRLTYGTIISSTQLFTQALHSRSQPVAA
SLPASSTSQPGREDKTDSAKKEWERAAPENLRRMHTSKDLRRIIHAASGSTSRTSNIGRE
FLGYVSGLDVTVPLLSSPRLVRRPYDPLICENTILSRATALATGRHVTKSSSSGAAGAPG
NGSPIVARNHRFSDPWFESMDENNTRLALEINLILILSQALEGVKSPRLALRDRQLIARE
TATELGVFFDFLEHRGTPDIWQVKGSLIDADTRSSRTIQDTSDPTQINLPARLQKNSTID
KAPVCSPDHENFSMEMNRTETQEKRLDDSVLTTGVFKTNVSSVQFLPLMGKLLKTVVESL
DSTQFR
NT seq
5781 nt
NT seq
+upstream
nt +downstream
nt
atggaagtagctccaatgggcaatttgccttgcagcaaagatttatggtctatcatatcc
ggtacaacatgctgttgtgctaaagaaactgtcgaagaagaaataaagaatgccactgtt
ttactcaaagaagggcttcaattttttaaaccatatacagatgcatcattgcaaaatatt
tctaaaagagatccaccccctttacagcaaatgtatgatttaattaataaacttgctcca
ctccttaacttggatgctacaattacctgggatctggtatgcaatttcgtgtcgtacgaa
tatagaaattgcgcagagacctttgcatcgcagctctcggatcttacttctataagagca
ttaatcgatgatatttggaatttttattactcggaaagagtgactttgataaaatgcctt
aaacttatgattgaatataaagataataaaaggcatcctcatcacaaagaatttagaaag
tttcttaatgagattttggtaggaaatctgcttgaatctatacgaaaacaaatagaagca
ttgaagtttgtgaattctcctacacggtcgcaattctgtacagaagatcatttacatcaa
ttatataatagtactttaattgaaatgcgcgagctacttcatatattgactgtgattgta
caggatgtacatattcctagttacgaatttgccaagttttatggtagcattgggggagaa
cctagacgattagtcagtacaaaaagtcatgaagataaagaagctatcactaaaaagatt
gaagagatacagtacagtcaaatagcactattacttgtaacattggatgtagacaaacat
actggtatggatgactggataaatgatgtcagaagtaatatgcaagacatttttgaacat
aaatgtgttcgtgaaagttcaccacaagatggaccgttacttttatcatggatgctagca
aattatgcgattgatccagacaatatagacacattaattcgtttcagaccgtttggcatc
aaagccatacaacttgacgtatttgagtatctgcgagatttgataaactgtgaaatgttt
caagaagagacccattatgccgaagtcgtgcgaagcagcgtttacaatcttttatcctta
atgtgcgtctttatggatgaagatcgattaagtgctttaaatggtattttcgatgccctg
gctgccatagtaaagtttccagaatgcgcaactagattctgggcggaacaaggtgacggt
ttatggtcgatttataaagttgccaaagaactatatccttacaaatttgaaccgttaacc
aagatagctattggtctagcatccacaataattacgagtgccaaaaagattgcgtcggag
ttgaataatctacaatctctaaaaatagaggtttctcgccaaagagattgtagtaaacca
ttgcagccatacaaagcggattgtataattcaagagaactcatttactatagctagcaac
tgcgtgcgcgagaaaattaacgtgttatctgatgagaaagaagtagtattgtttcataca
aaggcgaattattggaacgctttgcatcataaaatggaacagttattttctcaagcaagt
cgtggaattacacatatcacggtgaatggagataatttaccggaaaatgttcgtctaggc
ctaaaattgttggaagcattattggctaaagatattgagataccatcgagcatagttatt
cctacagaattaagttttgaaattattaatcgattctcatatccagcactaccaacgaat
ctgtataaaatcattgctgtatgcatcagcatttcatcaaaattggttttgagatatccc
gaagacattctttcgcgaacgcgatccggtgtttatccaaaatttaataattggaatcag
aaaccgttatactttgcggaagcgatttccttcgatggtggtctcatcgcgtcgtggcta
tcaggaatagaaaccatcgaacatacgtatcccattctgtgcgcatttctagacacattg
tacaattatctaatcgcgaagcacagtaaagaagctatgtacactattgaaataccgggc
atggtatttctgctgcaagctgtattacccaagctggactcgtggtattttgaatcaaac
gcagaaagaattgatttatggctgaagagtatgttttgtattcatcgagccttggattca
actttacctaaagatgatattcgcaacgaattacaacttgttgtagtatacagtctgctt
tatttagaaccgcgtcacgcactgctgaaattacttcgaacaggcgagcgcacgttgcac
aataaaatgatttcggagacaaattggatcaatggaaaaggattcaaaactatcaaaagt
gtagaactagctctgtcgatagtcaatcgattattaatgttcagaaaatctctgggtcta
gaacttggtgacagatcgcctctcgaaattgctttgtactcctctccgagagtacctaac
ggacttcttatagtaccaacaattgttaattatctgtatgtttggtttagtccttcattg
cagaaaatggctgtaagattactgaagaaatttgcggaggaattttctatgtctttgctc
gtttgcatgggaatggacggaacatctataagagaaacattcgcatttcgattaactcta
ccaacatgcgcgattgaagtcaaagtcgctattttagaattggttgccgtatgtctggag
aaacaacctggcttgacggaagctctcttcaacatcatgcatcaagcagaacgcaagaga
atcttcccacgtccagccgacgaatttcttactgaaggttgtagtcaattcctggattca
tatttagaacgaatgtataaggaagacgatattgtgtgtgataaattgtacgacagcaca
atgacagtattgcgcgccatgtggtatcatagaaatgaaatccttgtcaatttctttcgg
aagcgagagaaattctggagccatctattcgcgccgctttttaaaactttagtggcgggt
gcgaagggctattctcaattgttagatgtaattacattggaattgtacaaaagtccatta
ttagaaaataatttttcaaaaagtttaaaggaactattggacaaatctaaggatcattgg
aaaaaattagctatgtatgttctcgatgttcctgcaaacaatgaaaacgagaaggaacag
catacaaagcaagataaactcatagaaccattgtacgaaattaatttagagtcttggtat
cactttattgttatgctcaccgatgatcgaacggcgaaaaattatccgattaatgtaaca
caggcacatctgctaactcagttggccttggattctctattggagcgagtgaaggaacct
aatgattccagtagtggcaagattccgatgttattggcttctttatctctgagatgtatt
acttcttggaaacagatgtgtgtcggtgattcgaggatttttaaaaccagactatcgcag
ctgacacaagagatagcgcaaacttatcgcggttttggaaaggccctacgacagacaatg
atatcgttacttcttggatgcgtgcaactggtcaaaagtactttagccgaagattcggca
agtctggaatatcttttagcgcactcttgcacgatcgctatttatgaactagaggaattg
aagaaagctgcccttcaattagaacatcgaaaacaacaattttctgtcactcttacaact
gatgagaaagatacacagaaaaaagctgattgttacagcgcggagacacttcgtggtata
cgagagagtctaccggcgacgttagctatcagcatggtgacgcaattgttacgatcatat
gttgaacggaatgcaaatttcaagcatcgtctaagagctagttgtgtgcagcttcgtcag
atgatacctgaattgatggtatgtgtcggttatactcttcagaaatatccgtatctgaag
tttagtacagcggctctgagtttgttaggcgttatatcacgttcaccatattgtccatat
cctattaatgataatgacatcgcgaaactctggctgagcttgattccaccagcagatatc
tccaatagtatgctcgattcattatatgatgattcggtaaatggtcagtggcgttgccaa
gattggtggccattatacacactgggtttggaatttctgataggcctggtcagcagcgag
acgcacatgatgtttgtcaatcatgtagttgttttcttaaattctcatgaacatcaatta
atggtggtatccacattattgagacacactgccgatctgctagccgccgatctaattcaa
tcactggtcgctcttatacatgctacagccacgcaaatatacatttggaatgcaattcaa
ccaagtgttcgcgaaactcttattaaatgtatgtatttggcgtacgatagtacagtaaac
ctgctgctgagaccgcggatacttaaatttatcattgacggtatcagcgtggagagtgcc
gaagagctcgagtcttgcgacagtcggttacccagtggtgaactgaaactgctggtgaac
aaattgattgtcataaatacaacttgcgcgttaagcttcgtccacttctcgcccaagttg
aatactctggtggatacgatatatactcaggattactggtacacgccaatggccgagatg
aactttggacctccgcaaatgagcatgagttccggtccgcggcttacttatggtacaata
atcagctcgacacagctgtttacccaagctcttcactctcgttcgcagcccgttgctgct
tcattacccgcgtcttcaacatcgcaacctggacgcgaagacaaaacagattctgcaaag
aaagaatgggaacgtgccgcaccagaaaatcttcgtcgcatgcatacgagtaaggattta
cgacgaataattcacgcggcctctggttcaacttccagaacgtctaacattggcagagaa
ttcctaggatacgtcagtggtctagatgtcacagtaccattacttagcagtcctagactc
gtgcgtcgaccgtatgatccactgatatgtgaaaacactattctttcaagagcaactgct
ttggcaactggtagacatgtcacgaaaagtagtagcagtggagctgctggagctccgggt
aacggtagcccaatcgtagcaagaaatcacagatttagtgatccatggtttgaatccatg
gatgagaacaatacacgattagcattggaaatcaatcttatcctgatattgtcacaggct
ctggaaggagtaaaaagccccaggctcgctttgcgagatcgtcagctcatagcacgggag
actgctaccgaactaggagttttcttcgattttctcgaacaccgcggtactcccgatatt
tggcaagtaaaaggttctctcatagatgcggatacaagaagttccaggacgattcaagat
acgagtgatccgacgcaaataaatttaccagcgagacttcaaaagaacagtactattgac
aaagcaccggtgtgctcgcccgaccacgaaaatttttcaatggagatgaaccgaactgaa
acacaagagaaaagacttgacgatagtgtcctcactactggcgttttcaaaacgaatgtc
agcagtgtacaattcttaccattaatgggaaaattacttaagacagttgttgagtcattg
gactcgacacaatttcgataa
DBGET
integrated database retrieval system
