Atta cephalotes (leaf cutting ant): 105618931
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Entry
105618931 CDS
T04923
Name
(RefSeq) pre-mRNA 3' end processing protein WDR33-like
KO
K15542
polyadenylation factor subunit 2
Organism
acep
Atta cephalotes (leaf cutting ant)
Pathway
acep03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
acep00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
105618931
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acep03019
]
105618931
Messenger RNA biogenesis [BR:
acep03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
105618931
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
Beta-prop_EML
Beta-prop_IFT140_1st
WD40_CDC20-Fz
Beta-prop_THOC3
Beta-prop_WDR3_1st
Beta-prop_WDR5
WDR55
Beta-prop_EML_2
Beta-prop_WDR3_2nd
WD40_Prp19
WD40_WDHD1_1st
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_Aladin
Beta-prop_TEP1_2nd
Beta-prop_HPS5
Beta-prop_WDR19_1st
EIF3I
PEP5_VPS11_N
Beta-prop_WDR11_2nd
WD40_Gbeta
Beta-prop_RIG_2nd
Beta-prop_WDR36-Utp21_1st
Motif
Other DBs
NCBI-GeneID:
105618931
NCBI-ProteinID:
XP_012055855
UniProt:
A0A158NE97
LinkDB
All DBs
Position
Unknown
AA seq
303 aa
AA seq
DB search
MSGNIQFANPPPAVSLPNMSVPPPTTPNLSAPPPNLTTINTSGSYQHRYTNHREGNRGFF
KPFRPYHAPKIVTGGQETLQDEFDGKRLRKSVMRKTVDYNSAIIKSLENRVWQRDYRDRR
ALQPDVIYYPDLLPPPSYIDNPINAVTTRFVKTATNKMRCPIFCMAWTPEGRRLVTGASS
GEFTLWNGLTFNFETILQAHDSPVRTMVWSHNESWMVTGDHAGYVKYWQSNMNNVKMFQA
HKEAIRGLRYIIHHTSPYVSCVTVADRSILAVVRISDVTLLLFLFWFCAVSDKAIVILVW
VHR
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgtctggaaacattcaatttgcgaatccgccgccagctgtaagcctgcccaacatgtct
gtgccaccacctacaactccgaatttgtcagcgccaccaccaaatttaaccactataaac
acatcgggaagttatcagcatcgatatacaaatcatagagaaggcaatcgtggtttcttt
aaaccatttagaccttatcatgctccaaaaattgtcactggaggacaagagactctgcaa
gatgaatttgatggcaagaggctgaggaaatctgttatgcgaaagactgtcgattacaac
tccgccatcattaaaagcttagaaaatcgagtatggcagcgggactatagggatcgtcgc
gcgcttcagccagatgtaatatattatcctgatttactccctccaccaagttatattgac
aaccctataaatgcagttaccacgaggttcgtaaaaacggctaccaataaaatgcgatgt
ccaattttttgtatggcttggacaccagagggtagacgtcttgtcactggcgcttcgagt
ggagaatttactttgtggaatggccttactttcaatttcgaaactattctgcaggcacat
gacagcccggtcaggacaatggtatggtcacataatgaaagctggatggtaacaggcgac
cacgcgggctacgtgaaatattggcagagcaacatgaacaatgtcaagatgtttcaagcg
cacaaagaagcgattagaggactcaggtatatcatccaccacactagtccttacgtctct
tgcgtcactgttgccgatcggtccatccttgccgtagttaggatatcggacgtgactctt
cttctcttccttttctggttttgtgcagtttctgacaaagcaatagtgattcttgtatgg
gtacacaggtga
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