KEGG   Atta cephalotes (leaf cutting ant): 105619622
Entry
105619622         CDS       T04923                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB7 isoform X1
  KO
K03015  DNA-directed RNA polymerase II subunit RPB7
Organism
acep  Atta cephalotes (leaf cutting ant)
Pathway
acep03020  RNA polymerase
acep03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:acep00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    105619622
  09124 Replication and repair
   03420 Nucleotide excision repair
    105619622
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:acep03021]
    105619622
   03019 Messenger RNA biogenesis [BR:acep03019]
    105619622
   03400 DNA repair and recombination proteins [BR:acep03400]
    105619622
Transcription machinery [BR:acep03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     105619622
Messenger RNA biogenesis [BR:acep03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     105619622
DNA repair and recombination proteins [BR:acep03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      105619622
SSDB
Motif
Pfam: S1 SHS2_Rpb7-N
Other DBs
NCBI-GeneID: 105619622
NCBI-ProteinID: XP_012056532
UniProt: A0A158NG74
LinkDB
Position
Unknown
AA seq 180 aa
MFYHISLEHEILLHPRYFGPQLLDTVKQKLYTEVEGTCTGKYGFVVAVTTIDNIGAGIIQ
PGQGFVVYPVKYKAIVFRPFKGEVLDAIVTQVNKVGMFAEIGPLSCFISHHSIPEDMQFC
PNVNPACYKSKEEDVVIQADDEIRLKIVGTRVDATGIFAIGTLMDDYLGNRIFNVVLQGI
NT seq 543 nt   +upstreamnt  +downstreamnt
atgttttaccatatttctttagaacatgagattttgttacatccccgatactttggtccc
caattactcgacactgtaaagcaaaagctctatacagaagtagaaggaacttgtacagga
aaatatggttttgttgtagctgtcacgacaattgataatataggagctggtattatacaa
ccaggacaaggttttgtagtatatccagtcaagtataaagcgattgtattcagaccattc
aagggtgaagtactagacgcgattgtgactcaagtaaataaggttggaatgtttgctgaa
ataggcccactttcatgctttatatctcatcactcaattccagaggatatgcagttttgt
ccgaatgtgaatccagcctgttacaaatcaaaagaagaagacgtagttattcaagcagat
gacgaaattagattaaaaattgtgggcacaagagttgacgccacgggaatttttgctatt
ggcacgttaatggatgattatttaggtaacaggatatttaacgttgttttgcaaggcatt
taa

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