Atta cephalotes (leaf cutting ant): 105619625
Help
Entry
105619625 CDS
T04923
Name
(RefSeq) uncharacterized protein LOC105619625
KO
K03679
exosome complex component RRP4
Organism
acep
Atta cephalotes (leaf cutting ant)
Pathway
acep03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
acep00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
105619625
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acep03019
]
105619625
Messenger RNA biogenesis [BR:
acep03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
105619625
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
105619625
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRP4_S1
Isochorismatase
EF-hand_1
ECR1_N
EF-hand_5
EF-hand_6
EF-hand_7
KH_6
EF-hand_8
EH
RRP40_S1
ECR1_N_2
Motif
Other DBs
NCBI-GeneID:
105619625
NCBI-ProteinID:
XP_012056537
UniProt:
A0A158NG79
LinkDB
All DBs
Position
Unknown
AA seq
618 aa
AA seq
DB search
MAQYPPINVRLAVNRVDFNLITNDGIQPRLYTPGEQISSQPDFLRGHGTYVDDEKTLRAS
VAGILEKVNKLISIRPLKARYNGEIGDLVVGRITEVQQKRWKVDINAKLDAVLLLSSVNL
PGGELRRRSVEDEQTMRRYLQEGDLICAEVQSIFADGSLSLHTRVLKYGKLSQGIMLKVP
PVLIQRKKTHYHTLESGAILILGYNGYVWISANIQNIDKSEGGFTEDLSKIPVENRNVCT
RLRNCILILAQCNMLLSDTSVTYAYEESSKYDVHELLHPEAMVDVDMDACFNAFDKDGDG
FLSISEFDLVCRALFRNDRGKIYGLEEDQLREVYSIFDLKGDGLIDREEFEVCWNRWIKV
CTRPKSAFLIVDVQNDFITGSLNIKQCAAQHDGSEVIDPINQLLETVPFDAVFYSLDWHP
VDHVSFIDNLHLREVDISSNISKEAAQVYDTVTFQGPPLLKQRLWPRHCVQDSWGAELHK
DLKIVDKAIKIYKGTNSEVDSYSVFWDNKKLTETTLSSQLQEKGATDIYICGLAYDVCVG
ATAVDALTSGYRTILIDDCSRGVDLVDIEKTKATVIGSNGVIVNSSQVKAMVEGRDRRPE
LGYKLALEIKQKLSLGEE
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atggctcaatatccgcccattaatgtacgtctggcagtaaacagggtagatttcaatcta
ataacgaatgatggcatccagccacggctttacacccctggcgagcagatatccagtcaa
ccggattttctgagaggccatggaacttatgttgatgatgagaaaacattgcgtgcatct
gttgctggaatcttggaaaaggtgaacaaacttatatcgattaggcccttgaaggcacgt
tataatggagagatcggagatcttgtcgtaggaaggataacggaagttcaacagaagcgt
tggaaagttgatataaatgctaaacttgatgctgtcctgttattgtccagtgttaatttg
cctggtggtgaattgagaagaagatccgtcgaagatgaacagacgatgcgcagatatttg
caggaaggagacctgatttgtgcagaagtgcaatcaatcttcgcagacggctcactctcc
ctacatacacgagtattgaaatatggcaaattgtcgcaggggataatgttaaaggtacca
ccggtgttaattcaacgcaagaagacacactatcacactctagagagcggagccattttg
atactcggttataacggctacgtatggataagtgcaaacattcaaaatatcgataaatcc
gagggtggtttcacagaggatctgtcgaaaattcctgtggaaaatcgcaatgtttgtaca
cgtttacgtaattgcatcttgatcctggcgcaatgcaacatgctattatccgatacctcc
gtgacatatgcttacgaagaatcctctaagtacgacgtacacgaattattacatcctgaa
gcgatggtcgacgtagacatggacgcgtgttttaacgccttcgataaagacggcgacgga
ttcctgtcgatttccgaatttgatctcgtatgtcgcgcattgtttcgaaatgatcgcggc
aagatttatggcctcgaagaagatcaactgcgcgaggtgtattcaatcttcgatctcaaa
ggcgacggcctgatcgaccgggaagagtttgaggtgtgctggaaccgatggatcaaagta
tgcacacgtcccaaaagcgctttcctaattgtggatgtgcaaaatgattttataacaggt
tccttaaacataaagcaatgcgccgcgcaacacgatggttcggaagtaatcgatccaatt
aaccaattgttggaaactgtaccgttcgatgcagtattttattctttggattggcatccc
gtggaccatgtatctttcattgataatttgcacttgagagaagtagacatcagcagcaat
atctcgaaggaagcggcgcaggtatatgacacagtaacgtttcaaggaccaccgttactg
aaacaacgcctatggcctcgtcattgcgtacaggattcttggggtgccgagctccataag
gatctgaagatcgtcgacaaagcgatcaagatctacaagggcacgaattcagaagtcgac
tcgtattcggtgttttgggacaacaagaagctcaccgagaccacgctgtcatcgcagctg
caagaaaaaggcgccaccgatatctatatctgtggattggcctatgacgtttgcgtgggc
gctactgcagtggatgcgctcaccagcggttatcgcactatactgatcgatgactgcagt
cgtggcgtagacctcgttgacatcgagaagaccaaggccactgtaataggtagcaatggc
gtgatagtgaattccagccaggtgaaggctatggtggaaggaagagaccgacgaccggaa
ctcggttacaaactcgcattggaaattaagcaaaaattgagcctcggtgaagaataa
DBGET
integrated database retrieval system
