Atta cephalotes (leaf cutting ant): 105621505
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Entry
105621505 CDS
T04923
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
acep
Atta cephalotes (leaf cutting ant)
Pathway
acep03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
acep00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
105621505
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acep03019
]
105621505
Messenger RNA biogenesis [BR:
acep03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
105621505
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
105621505
NCBI-ProteinID:
XP_012058366
UniProt:
A0A158NLF8
LinkDB
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Position
Unknown
AA seq
518 aa
AA seq
DB search
MADESEDQWLYGDSTDGKEYTSTNIQSEIQQNDSTLSEVHENLQIREDQKMEGTGEIPSE
MQEVIDSLGDGDEESSSLNNVQEENLEASKNGTRDASSQEDGEAASESDSDDDVHVVIGD
IKSAPTYGNLNIKRGGLLTNTSGVSDKLNKQPGKFSIDEFETIGVINGIPAHEFNLDQLE
DKPWRQPGADITDYFNYGFNEDTWRAYCERQKRMRSESGVGLVLNAGSGSSNPSGMRMPQ
VAITNDNSKYSGIMGPKRAGPPPGRKMAGTIDVIGSSGLASRRNLDKSPPKGNVIQVMTA
DRREYSRKPGFPDMSVPPPGAGMPPPPFDIPPPGYAGEPTPFYMPETDPYYQSYEPTQDN
QWGNDPTWQPTNLAIPMTEGEDDKDMGPKTIPTMVPPTNIPPLMQPRDQRDGRDRERDRD
RDRDRELDSMSRDRDKDRDRDRDREKDSMMRDRDRDSMTRDEDRERDRSRSQYRHKDRHR
HRSRSRSRRHKSRSRSPTRSRKKKSRRSDRERSKEESE
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atggcggatgaaagcgaggatcaatggttatatggggattcaacggacggcaaggagtat
acatcgacaaatattcaatcagagattcaacaaaatgactcgacactctccgaagttcat
gaaaatttgcaaattcgggaggatcagaaaatggaaggtactggtgagataccgtccgag
atgcaagaagttatcgactctcttggcgatggtgatgaagaatcttcttcgttgaataat
gtacaagaagagaacttagaagcaagtaaaaatgggacgagagatgcctctagtcaagaa
gatggcgaagctgccagcgaatctgattctgatgatgatgtacatgttgttattggtgat
atcaagtcagcaccaacatatggtaatttaaatatcaagagaggaggattgctaacaaat
acatctggtgtatcagacaaactgaacaaacagccaggaaagttcagtatagatgaattt
gaaactattggtgttatcaatgggataccagcccatgagtttaatttagatcaattggag
gataaaccatggagacaacctggtgcagatatcacagattatttcaactatggtttcaat
gaagacacctggagagcatattgtgaacgtcagaagcgaatgcgaagcgagtctggagta
ggattggtcttaaatgcaggtagtggtagtagtaatccaagtggcatgagaatgcctcaa
gtggcgataaccaatgacaacagtaaatactctggtattatgggtcctaagagagctggc
ccaccacctggaaggaaaatggcagggactatagatgttataggaagttctggtttagct
tctagaagaaatctggataagtccccaccaaaaggaaatgttatacaagttatgactgct
gacagaagagagtattctagaaaaccaggtttccctgatatgagtgtaccacctcctgga
gcaggaatgccaccgccgccattcgatatacctccaccaggatatgcaggagaaccgacg
ccattctatatgccagaaactgatccatattatcagagttatgaacccacacaagataac
caatggggcaatgacccaacatggcagccgacaaatctggcaatcccgatgactgaaggt
gaagacgacaaagatatgggacctaagacgatacctacgatggttccaccaacaaacatt
ccacctctgatgcagccgcgcgatcagagggatggtagagaccgggaacgagacagagat
agggatcgcgaccgggaattggattccatgagcagagatagggacaaggatagagatcgc
gatcgtgatagagaaaaggattccatgatgagggatcgcgatagagactctatgacgcga
gatgaagatcgagagcgtgatagatccaggtctcaatatcgacataaagatcgacatcgg
catcgatcaagatcgcgatctcgtagacacaagtcaagatcacggagtccaactcggtcg
cgtaagaagaaatctagacgctcggatagagagcgttccaaggaagaaagtgaataa
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