KEGG   Atta cephalotes (leaf cutting ant): 105621647
Entry
105621647         CDS       T04923                                 
Name
(RefSeq) replication factor C subunit 4
  KO
K10755  replication factor C subunit 2/4
Organism
acep  Atta cephalotes (leaf cutting ant)
Pathway
acep03030  DNA replication
acep03410  Base excision repair
acep03420  Nucleotide excision repair
acep03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:acep00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    105621647
   03410 Base excision repair
    105621647
   03420 Nucleotide excision repair
    105621647
   03430 Mismatch repair
    105621647
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:acep03032]
    105621647
   03036 Chromosome and associated proteins [BR:acep03036]
    105621647
   03400 DNA repair and recombination proteins [BR:acep03400]
    105621647
DNA replication proteins [BR:acep03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    105621647
  DNA Replication Termination Factors
   ELG1-RFC complex
    105621647
Chromosome and associated proteins [BR:acep03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    105621647
DNA repair and recombination proteins [BR:acep03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     105621647
  Check point factors
   HRAD17(Rad24)-RFC complex
    105621647
SSDB
Motif
Pfam: Rep_fac_C AAA RCF1-5-like_lid DNA_pol3_delta2 AAA_lid_RFC1 AAA_16 Rad17 AAA_22 bpMoxR AAA_11 AAA_14 DUF815 RuvB_N AAA_30 AAA_assoc_2 ResIII Mg_chelatase AAA_2 AAA_7 AAA_5 AAA_19 AAA_24 DNAX_ATPase_lid TniB Gp44_lid NB-ARC Bac_DnaA RNA_helicase AAA_3 AAA_28 Gasdermin_C AAA_29
Other DBs
NCBI-GeneID: 105621647
NCBI-ProteinID: XP_012058504
UniProt: A0A158NLU6
LinkDB
Position
Unknown
AA seq 356 aa
MHAFLKTGKLGAPAAEVKKPSTSQIKDNKKNLTPWVEKYRPKNVDDIVEQTEVVNVIRQA
MEHGDFPNMLFYGPPGTGKTSIIHAAARQMFGSLYKDRILELNASDDRGIQVVREKIKSF
ALRRANPNGPDGKKCPPFKIIILDEADSMTGAAQTALRRIMEKESHSTRFCLVCNYLSRI
IKPITSRCTKFRFKPLSDEKSIARLEYICNEENLKADKSVLEKIVEASGGDLRQAVMCLQ
SITRLKGKDYEITADDALDVIGLIPDEQINLLWEACKKGNYINVQKSLENLLLEGYPGAK
VIEQLNERIIFSDELTDKQKAIIGNVLGECDYRLTEGSDEYIQLLNVFSTTLMACK
NT seq 1071 nt   +upstreamnt  +downstreamnt
atgcacgctttcctgaaaaccggaaaactgggtgctccggcagcggaggtgaagaaacca
tcgacctctcaaattaaggacaacaagaagaatctaacaccatgggtagaaaaataccga
ccaaaaaatgtcgacgatattgtggaacaaacagaggtggtgaacgtgatacggcaggca
atggaacatggagattttcccaatatgctgttttatgggccaccaggtacaggcaagact
agcatcatccatgcagccgcgaggcagatgtttggtagcttgtacaaggacaggatactg
gaattgaatgcttctgatgacagaggcattcaggttgtaagagaaaagatcaaatccttt
gctttgcgcagagctaatcctaatggaccagacggaaagaaatgtccgccattcaagatt
atcatcctagacgaggcagatagtatgactggtgccgcgcaaacagcccttcgtcgaatt
atggagaaagagtcacacagtacgcgcttttgtttagtgtgcaattacctgtcgcgaatc
atcaagccgataacatcgcgttgtacgaaatttcgatttaagccgctgagcgatgagaag
agtattgccaggcttgaatacatatgcaatgaagaaaatctaaaggccgataaaagtgtc
ttagaaaaaatcgttgaagcatcaggtggtgatttaagacaggctgtcatgtgtttacaa
tcgatcacgcgattgaagggaaaagactatgagattaccgcagatgatgcactcgacgtt
attgggttaattcctgatgaacaaattaatttactgtgggaggcttgtaaaaaagggaat
tacattaatgtccagaagtcacttgaaaatttgctgctagaaggatatccaggagcaaag
gtaattgaacaattaaacgagagaattattttctccgatgaattaactgacaaacaaaaa
gcgataattggtaatgtgctcggtgaatgtgattacagattaacagaaggaagcgatgaa
tatatacaattgttaaatgtgttttctactaccttgatggcttgcaaatga

DBGET integrated database retrieval system