KEGG   Atta cephalotes (leaf cutting ant): 105621764
Entry
105621764         CDS       T04923                                 
Name
(RefSeq) splicing factor 3B subunit 3
  KO
K12830  splicing factor 3B subunit 3
Organism
acep  Atta cephalotes (leaf cutting ant)
Pathway
acep03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:acep00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    105621764
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:acep03021]
    105621764
   03041 Spliceosome [BR:acep03041]
    105621764
   03036 Chromosome and associated proteins [BR:acep03036]
    105621764
Transcription machinery [BR:acep03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    SAGA/TFTC/STAGA complex
     105621764
Spliceosome [BR:acep03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    105621764
 Complex B
    105621764
 Complex C
   U2 SnRNP specific factors
    105621764
Chromosome and associated proteins [BR:acep03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    STAGA complex
     105621764
    TFTC complex
     105621764
SSDB
Motif
Pfam: Beta-prop_RSE1_1st Beta-prop_RSE1_2nd CPSF_A Beta-prop_VPS8
Other DBs
NCBI-GeneID: 105621764
NCBI-ProteinID: XP_012058609
UniProt: A0A158NM51
LinkDB
Position
Unknown
AA seq 1217 aa
MYLYNLTLQRATGITHAVHGNFSGSKMQEILVSRGKSLELLRPDPNTGKVHTLLTVEVFG
IIRSLMAFRLTGGTKDYIVVGSDSGRIVILEYISAKNIFEKVHQETFGKSGCRRIVPGQY
LAIDPKGRAVMIGAIEKQKLVYILNRDAEARLTISSPLEAHKSNTLVYHTVGVDVGFENP
MFACLEIDYEEADSDPTGDAAVKTQQTLTLYELDLGLNHVVRKYSEPLEEHANFLVSVPG
GNDGPSGVLICSENYLTYKNLGDQHDIRCPIPRRRNDLDDPERGMIFVCSATHKTKSMFF
FLAQTEQGDIFKITLETDEDMVTEIKLKYFDTVPVAASMCVLKTGFLFVASEFGNHYLYQ
IAHLGDDDDEPEFSSAMPLEEGDTFFFAPRPLRNLVLVDEMDSLSPIMACQVADLANEDT
PQLYIACGRGPRSTLRVLRHGLEVSEMAVSELPGNPNAVWTVKRRIDEEYDAYIIVSFVN
ATLVLSIGETVEEVTDSGFLGTTPTLSCSALGEDALVQVYPDGIRHIRADKRVNEWKAPG
KKTIVKCAVNQRQVVIALTGGELVYFEMDPTGQLNEYTERKKMPSEVMCMALGNVAVGEQ
RSWFLAVGLQDNTVRIISLDPSDCLAPRSMQALPAAAESLCIVEMGAKEADNSEDAAPQQ
SSLYLNIGLQNGVLLRTVLDPISGDLADTRTRYLGSRPVKLFRIRMQGNQAVLAMSSRSW
LSYYHQNRFHLTPLSYESLEFASGFSSEQCPEGIVAISTNTLRILALEKLGAVFNQVSFP
LEYTPRKFAIHTDSAHLIVIETEHNAYTEETKQQRRQQMADEMQEAAGAEEAAVARELAE
AFMSEEPNEAVFGAPRAGPGLWASMLRLMAPTTGETFEVHRFEQNLAALCLCLVKFANQG
DQLFLIVGVAKEFQLNPRVSNGGFLYTYKVNPDCTSIELLHKSPLDEVPLAICPYQGRVL
VGVGRMLRLYDMGKKKLLRKCENKHIPNAVVSINAIGQRIYVSDVQESVYAVRYKRQENQ
LIVFADDTHPRWITTTCVLDYDTVATADKFGNIAVIRLATGINDDVDEDPTGNKALWDRG
LLNGASQKADTVACFHVGETVMSLQKATLIPGGSESLVYTTLSGTVGVLVPFTSHEDHDF
FQHLEMHMRSEHPPLCGRDHLSFRSYYYPVKNVIDGDLCEQFNSIEPTKQKSISGDLERT
PSEVSKKLEDIRTRYAF
NT seq 3654 nt   +upstreamnt  +downstreamnt
atgtatctatacaatttgactcttcaacgtgccacgggcatcacgcacgcggtgcacggt
aatttctccggcagcaaaatgcaggagatcctcgtctcccgtggtaaatcgttagagtta
ctacgaccggatccaaatacgggaaaagtccataccctgttgaccgtcgaggttttcggc
attatccgatctctcatggcgttcagacttaccggcgggacgaaggattacattgtcgtc
ggatcagattccgggcgtatagtaatattagagtatatttctgccaagaacatctttgag
aaagtacatcaagagacttttggcaaaagtggatgtagacgcattgttcctggccaatat
cttgccattgatccaaaaggaagagcagttatgataggtgctatcgaaaaacagaaactt
gtgtacattcttaacagagatgctgaggctcgtcttacaatctcttctccattggaagct
cataagagcaacacactagtgtatcatacagttggtgtcgatgttggtttcgaaaatcct
atgtttgcatgtttagagattgattacgaggaagccgatagcgaccctacgggcgatgca
gcagtgaaaacgcaacaaactcttacactgtatgagcttgatcttggtctgaatcacgta
gtgcgaaaatacagcgagccattagaagaacacgctaactttctcgtatctgtacctggc
ggtaatgacggcccaagtggtgtgctcatttgttccgagaactatcttacatacaaaaat
ctcggggatcagcatgacatacgttgtccgatcccgcgacgtcgtaatgatttagatgat
cccgagagaggaatgatattcgtgtgttcggctacacataaaacgaagagcatgttcttc
tttttggcgcagacggagcagggtgatatcttcaagattaccctcgaaacggatgaagat
atggtcactgagatcaagctgaagtacttcgatactgtacccgtagcagcaagtatgtgc
gtcttgaaaacgggattcctgttcgtcgcctcggaatttggaaaccattacctgtatcaa
atagcgcatctcggagacgacgatgatgagcccgaattcagttcagcgatgccgttagaa
gaaggagacactttcttcttcgccccgcgaccgctccgaaatctagtattggtcgatgaa
atggacagtctctcgcccataatggcttgccaggtagcagatctggcgaacgaagacacg
ccgcaattgtacatcgcttgtggacgaggaccgcgatccacattgcgagtgttacgccac
ggtctcgaagtttccgagatggccgtgagcgagctgcctggtaatccaaacgctgtttgg
accgtgaagagaagaatcgatgaggaatatgatgcatacatcatagtctccttcgtgaat
gccacactcgtactcagtatcggcgagactgtcgaggaagtgacggactcgggttttctc
ggtacaacaccgaccttgagttgctccgccttaggcgaggacgcattggtgcaggtatat
cctgacggtatacgtcacatccgagcggataagcgtgttaatgaatggaaggcacctggc
aagaagacgatcgtaaaatgtgcagtcaatcaacgtcaagttgtgattgccctcactgga
ggagaactagtctacttcgagatggatcctaccggacaattgaacgaatatacggaaaga
aaaaagatgccctcggaagtaatgtgcatggccctcggaaacgttgcagttggcgagcaa
cgttcatggttccttgctgtcggtctgcaggataatacagtgaggataatatcgttggat
ccctcagattgtctagctccaagaagtatgcaggcgttaccagcagctgcggagagttta
tgcatcgtggaaatgggcgctaaagaggccgacaattccgaggatgcggcgccacagcaa
tccagtttgtacctgaatataggtttgcagaacggtgtgttgcttagaactgtgttagat
cctatttccggagatctcgcagacacgagaacacgctacctaggttctcgaccagtgaag
ctcttcagaatacgaatgcaaggtaatcaggcggtgttggcgatgagcagccggtcctgg
ctgagttattaccaccagaatcgtttccacttaacgcccctgtcatacgagagtcttgaa
ttcgcgtcgggcttcagttccgagcaatgtccagagggtatcgtcgccatatcgacaaat
acattgaggatcttggcgctcgaaaaactaggggccgtgttcaatcaagttagctttcca
ctggagtacactccgaggaagttcgcaattcatacagattctgcacacctaatagtcata
gaaacggagcacaatgcttacacggaggagacaaagcaacagagaagacagcagatggcg
gatgaaatgcaagaggcggctggcgccgaggaggcggctgtcgctagagaattggcggaa
gctttcatgtcggaggagccaaacgaggcggttttcggtgccccgcgagctggcccggga
ttgtgggcttccatgttaagactaatggcaccgaccaccggagaaacattcgaagtgcat
cgtttcgagcaaaatctagccgcgttatgtctttgcctcgtaaaatttgccaatcaaggt
gatcaattgtttctcatcgttggagtcgcgaaggaatttcaattaaatcctagagttagc
aatggcggttttctttacacatacaaagtaaatccagactgtaccagtatcgaactgctg
cacaaatctccgttagatgaagtaccgttagccatttgtccatatcaaggccgagtacta
gttggcgtgggtagaatgttacggctttacgacatgggtaaaaagaaattattgcgtaag
tgcgagaacaaacatataccgaacgcagtcgtatccataaacgcaatcggccaacggatc
tacgtcagcgacgtacaggaatctgtatatgcagtgaggtacaagcgccaggagaatcag
ttaattgttttcgcggacgacacacatcctaggtggatcacgacgacatgcgtattagat
tacgataccgtcgccaccgccgacaaattcggaaacatagctgtgatacgattggcgact
ggtattaatgatgacgtggatgaagatcctaccggaaacaaggctctatgggatagagga
ttgttgaatggcgccagtcaaaaagcggacacagtggcgtgtttccacgtcggcgagaca
gtgatgtcgttacagaaggcaactctcatacccggtggttctgagagtctggtttacacg
accctaagtggaacagtaggcgtgctcgtgccattcacaagccacgaggatcacgatttc
ttccagcatctggaaatgcacatgcgatcagagcaccctcctctgtgtggcagggatcat
ctgtccttccgatcgtactattaccctgtaaaaaatgtcatcgacggtgatctttgcgag
caattcaactcaatcgagcctactaaacagaaaagcatctctggcgatctcgagagaacg
ccatccgaggtgtcaaagaaactagaggacatacgtacgcgttatgctttctaa

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