Atta cephalotes (leaf cutting ant): 105621764
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Entry
105621764 CDS
T04923
Name
(RefSeq) splicing factor 3B subunit 3
KO
K12830
splicing factor 3B subunit 3
Organism
acep
Atta cephalotes (leaf cutting ant)
Pathway
acep03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
acep00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105621764
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
acep03021
]
105621764
03041 Spliceosome [BR:
acep03041
]
105621764
03036 Chromosome and associated proteins [BR:
acep03036
]
105621764
Transcription machinery [BR:
acep03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
105621764
Spliceosome [BR:
acep03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
105621764
Complex B
105621764
Complex C
U2 SnRNP specific factors
105621764
Chromosome and associated proteins [BR:
acep03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
105621764
TFTC complex
105621764
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
CPSF_A
Beta-prop_VPS8
Motif
Other DBs
NCBI-GeneID:
105621764
NCBI-ProteinID:
XP_012058609
UniProt:
A0A158NM51
LinkDB
All DBs
Position
Unknown
AA seq
1217 aa
AA seq
DB search
MYLYNLTLQRATGITHAVHGNFSGSKMQEILVSRGKSLELLRPDPNTGKVHTLLTVEVFG
IIRSLMAFRLTGGTKDYIVVGSDSGRIVILEYISAKNIFEKVHQETFGKSGCRRIVPGQY
LAIDPKGRAVMIGAIEKQKLVYILNRDAEARLTISSPLEAHKSNTLVYHTVGVDVGFENP
MFACLEIDYEEADSDPTGDAAVKTQQTLTLYELDLGLNHVVRKYSEPLEEHANFLVSVPG
GNDGPSGVLICSENYLTYKNLGDQHDIRCPIPRRRNDLDDPERGMIFVCSATHKTKSMFF
FLAQTEQGDIFKITLETDEDMVTEIKLKYFDTVPVAASMCVLKTGFLFVASEFGNHYLYQ
IAHLGDDDDEPEFSSAMPLEEGDTFFFAPRPLRNLVLVDEMDSLSPIMACQVADLANEDT
PQLYIACGRGPRSTLRVLRHGLEVSEMAVSELPGNPNAVWTVKRRIDEEYDAYIIVSFVN
ATLVLSIGETVEEVTDSGFLGTTPTLSCSALGEDALVQVYPDGIRHIRADKRVNEWKAPG
KKTIVKCAVNQRQVVIALTGGELVYFEMDPTGQLNEYTERKKMPSEVMCMALGNVAVGEQ
RSWFLAVGLQDNTVRIISLDPSDCLAPRSMQALPAAAESLCIVEMGAKEADNSEDAAPQQ
SSLYLNIGLQNGVLLRTVLDPISGDLADTRTRYLGSRPVKLFRIRMQGNQAVLAMSSRSW
LSYYHQNRFHLTPLSYESLEFASGFSSEQCPEGIVAISTNTLRILALEKLGAVFNQVSFP
LEYTPRKFAIHTDSAHLIVIETEHNAYTEETKQQRRQQMADEMQEAAGAEEAAVARELAE
AFMSEEPNEAVFGAPRAGPGLWASMLRLMAPTTGETFEVHRFEQNLAALCLCLVKFANQG
DQLFLIVGVAKEFQLNPRVSNGGFLYTYKVNPDCTSIELLHKSPLDEVPLAICPYQGRVL
VGVGRMLRLYDMGKKKLLRKCENKHIPNAVVSINAIGQRIYVSDVQESVYAVRYKRQENQ
LIVFADDTHPRWITTTCVLDYDTVATADKFGNIAVIRLATGINDDVDEDPTGNKALWDRG
LLNGASQKADTVACFHVGETVMSLQKATLIPGGSESLVYTTLSGTVGVLVPFTSHEDHDF
FQHLEMHMRSEHPPLCGRDHLSFRSYYYPVKNVIDGDLCEQFNSIEPTKQKSISGDLERT
PSEVSKKLEDIRTRYAF
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgtatctatacaatttgactcttcaacgtgccacgggcatcacgcacgcggtgcacggt
aatttctccggcagcaaaatgcaggagatcctcgtctcccgtggtaaatcgttagagtta
ctacgaccggatccaaatacgggaaaagtccataccctgttgaccgtcgaggttttcggc
attatccgatctctcatggcgttcagacttaccggcgggacgaaggattacattgtcgtc
ggatcagattccgggcgtatagtaatattagagtatatttctgccaagaacatctttgag
aaagtacatcaagagacttttggcaaaagtggatgtagacgcattgttcctggccaatat
cttgccattgatccaaaaggaagagcagttatgataggtgctatcgaaaaacagaaactt
gtgtacattcttaacagagatgctgaggctcgtcttacaatctcttctccattggaagct
cataagagcaacacactagtgtatcatacagttggtgtcgatgttggtttcgaaaatcct
atgtttgcatgtttagagattgattacgaggaagccgatagcgaccctacgggcgatgca
gcagtgaaaacgcaacaaactcttacactgtatgagcttgatcttggtctgaatcacgta
gtgcgaaaatacagcgagccattagaagaacacgctaactttctcgtatctgtacctggc
ggtaatgacggcccaagtggtgtgctcatttgttccgagaactatcttacatacaaaaat
ctcggggatcagcatgacatacgttgtccgatcccgcgacgtcgtaatgatttagatgat
cccgagagaggaatgatattcgtgtgttcggctacacataaaacgaagagcatgttcttc
tttttggcgcagacggagcagggtgatatcttcaagattaccctcgaaacggatgaagat
atggtcactgagatcaagctgaagtacttcgatactgtacccgtagcagcaagtatgtgc
gtcttgaaaacgggattcctgttcgtcgcctcggaatttggaaaccattacctgtatcaa
atagcgcatctcggagacgacgatgatgagcccgaattcagttcagcgatgccgttagaa
gaaggagacactttcttcttcgccccgcgaccgctccgaaatctagtattggtcgatgaa
atggacagtctctcgcccataatggcttgccaggtagcagatctggcgaacgaagacacg
ccgcaattgtacatcgcttgtggacgaggaccgcgatccacattgcgagtgttacgccac
ggtctcgaagtttccgagatggccgtgagcgagctgcctggtaatccaaacgctgtttgg
accgtgaagagaagaatcgatgaggaatatgatgcatacatcatagtctccttcgtgaat
gccacactcgtactcagtatcggcgagactgtcgaggaagtgacggactcgggttttctc
ggtacaacaccgaccttgagttgctccgccttaggcgaggacgcattggtgcaggtatat
cctgacggtatacgtcacatccgagcggataagcgtgttaatgaatggaaggcacctggc
aagaagacgatcgtaaaatgtgcagtcaatcaacgtcaagttgtgattgccctcactgga
ggagaactagtctacttcgagatggatcctaccggacaattgaacgaatatacggaaaga
aaaaagatgccctcggaagtaatgtgcatggccctcggaaacgttgcagttggcgagcaa
cgttcatggttccttgctgtcggtctgcaggataatacagtgaggataatatcgttggat
ccctcagattgtctagctccaagaagtatgcaggcgttaccagcagctgcggagagttta
tgcatcgtggaaatgggcgctaaagaggccgacaattccgaggatgcggcgccacagcaa
tccagtttgtacctgaatataggtttgcagaacggtgtgttgcttagaactgtgttagat
cctatttccggagatctcgcagacacgagaacacgctacctaggttctcgaccagtgaag
ctcttcagaatacgaatgcaaggtaatcaggcggtgttggcgatgagcagccggtcctgg
ctgagttattaccaccagaatcgtttccacttaacgcccctgtcatacgagagtcttgaa
ttcgcgtcgggcttcagttccgagcaatgtccagagggtatcgtcgccatatcgacaaat
acattgaggatcttggcgctcgaaaaactaggggccgtgttcaatcaagttagctttcca
ctggagtacactccgaggaagttcgcaattcatacagattctgcacacctaatagtcata
gaaacggagcacaatgcttacacggaggagacaaagcaacagagaagacagcagatggcg
gatgaaatgcaagaggcggctggcgccgaggaggcggctgtcgctagagaattggcggaa
gctttcatgtcggaggagccaaacgaggcggttttcggtgccccgcgagctggcccggga
ttgtgggcttccatgttaagactaatggcaccgaccaccggagaaacattcgaagtgcat
cgtttcgagcaaaatctagccgcgttatgtctttgcctcgtaaaatttgccaatcaaggt
gatcaattgtttctcatcgttggagtcgcgaaggaatttcaattaaatcctagagttagc
aatggcggttttctttacacatacaaagtaaatccagactgtaccagtatcgaactgctg
cacaaatctccgttagatgaagtaccgttagccatttgtccatatcaaggccgagtacta
gttggcgtgggtagaatgttacggctttacgacatgggtaaaaagaaattattgcgtaag
tgcgagaacaaacatataccgaacgcagtcgtatccataaacgcaatcggccaacggatc
tacgtcagcgacgtacaggaatctgtatatgcagtgaggtacaagcgccaggagaatcag
ttaattgttttcgcggacgacacacatcctaggtggatcacgacgacatgcgtattagat
tacgataccgtcgccaccgccgacaaattcggaaacatagctgtgatacgattggcgact
ggtattaatgatgacgtggatgaagatcctaccggaaacaaggctctatgggatagagga
ttgttgaatggcgccagtcaaaaagcggacacagtggcgtgtttccacgtcggcgagaca
gtgatgtcgttacagaaggcaactctcatacccggtggttctgagagtctggtttacacg
accctaagtggaacagtaggcgtgctcgtgccattcacaagccacgaggatcacgatttc
ttccagcatctggaaatgcacatgcgatcagagcaccctcctctgtgtggcagggatcat
ctgtccttccgatcgtactattaccctgtaaaaaatgtcatcgacggtgatctttgcgag
caattcaactcaatcgagcctactaaacagaaaagcatctctggcgatctcgagagaacg
ccatccgaggtgtcaaagaaactagaggacatacgtacgcgttatgctttctaa
DBGET
integrated database retrieval system