KEGG   Atta cephalotes (leaf cutting ant): 105621993
Entry
105621993         CDS       T04923                                 
Name
(RefSeq) WD40 repeat-containing protein SMU1
  KO
K13111  WD40 repeat-containing protein SMU1
Organism
acep  Atta cephalotes (leaf cutting ant)
Brite
KEGG Orthology (KO) [BR:acep00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:acep03041]
    105621993
Spliceosome [BR:acep03041]
 Complex B
  Other components
   Complex B specific factors
    105621993
SSDB
Motif
Pfam: WD40 WD40_WDHD1_1st WD40_Prp19 Beta-prop_EML_2 WD40_CDC20-Fz Beta-prop_TEP1_2nd WDR55 WD40_MABP1-WDR62_2nd EIF3I ANAPC4_WD40 Beta-prop_CAF1B_HIR1 Beta-prop_EML Beta-prop_WDR75_1st Beta-prop_WDR90_POC16_2nd WDR90_beta-prop_4th LisH_TPL Beta-prop_RIG_2nd NBCH_WD40 Beta-prop_TEP1_C WD40_MABP1-WDR62_1st Beta-prop_Nup120_160 Beta-prop_DCAF4 Beta-prop_IFT140_1st Ge1_WD40 Beta-prop_Vps41 Beta-prop_SPT8 Beta-prop_IFT122_1st Beta-prop_WDR35_TULP_N Beta-prop_HPS5 Beta-prop_NWD2_C Beta-prop_EIPR1 Beta-prop_NUP159_NUP214 WD40_RFWD3 Beta-prop_WDR19_1st Beta-prop_DCAF12 Beta-prop_SCAP Beta-prop_VPS8 Beta-prop_IP5PC_F PROPPIN WD_LRWD1 DUF7165 WD40_like LisH_WDR26 zf_topless
Other DBs
NCBI-GeneID: 105621993
NCBI-ProteinID: XP_012058814
UniProt: A0A158NMQ6
LinkDB
Position
Unknown
AA seq 510 aa
MSIEIESADVIRLIQQYLKESNLVKTLQTLQEETGVSLNTVDSVDGFVADINNGHWDTVL
KAIQSLKLPDKKLIDLYEQVVLELIELRELGAARSLLRQTDPMIMMKQQEPERYIHLENL
LARSYFDPREAYPDGSTKEKRRAYIATALAGEVSVVPSSRLLALLGQALKWQQHQGLLPP
GTTIDLFRGKAAVRDQEDEKYPTQLSKQIKFGQKSHVECARFSPDGQYLVTGSVDGFIEV
WNFTTGKIRKDLKYQAQDNFMMMEQAVLSMSFSRDSEMLAGGGQDGKIKVWRVQSGLCLR
KFEKAHSKGVTCLQFSRDNSQILSASFDTSIRVHGLKSGKTLKEFRGHSSFVNEVVFSSD
GHNIISASSDGTVKIWSLKTTECIGTYKSLGAADLTVNSIHTLPRNPEHFVVCNRSNTVV
IMNMQGQIVRSFSSGKREGGDFVTTVVSPRGEFIYCVGEDLVLYCFSTSSGKLERTLNIH
EKDVIGLAHHPHQNLLCSYSEDGLLKLWKP
NT seq 1533 nt   +upstreamnt  +downstreamnt
atgtcgattgaaatagagtctgctgatgtgatccgattgatacaacagtatcttaaggag
tcaaaccttgtcaagacactgcaaaccttacaagaggaaactggtgtgtcgctgaatact
gtagacagtgtggatggatttgttgcggatataaataatggccattgggatacagttctg
aaagctatacagtcattaaaattacctgacaagaaactcatagacttgtacgaacaggtt
gttttagaattaattgaactacgagaattaggtgcagcacgttccttattaagacagact
gatcctatgattatgatgaagcaacaagaacctgagagatatattcatttagagaatcta
cttgcacgttcgtatttcgatccgcgcgaggcatatcccgacggaagcacgaaggaaaaa
cggagagcgtacatagccaccgctcttgctggcgaagtgtcggtagtaccatctagcaga
ttgcttgctctgttgggacaagcattaaagtggcaacaacatcagggtctactgccgcct
ggcaccacgatagatttgttccgaggaaaagcggcggttcgtgaccaagaagacgagaag
tatccgacgcaattgtcgaaacaaatcaaattcggtcagaaatcacacgtggagtgcgcg
cgtttctcgcccgatggtcaatacttagtgactggttcagtggatggttttattgaagtg
tggaactttacaactggtaaaattagaaaagatttgaaatatcaggcgcaagacaacttt
atgatgatggagcaagcggtcctgtcaatgtcgttcagtcgtgacagcgagatgttggcg
ggcggtggtcaagatggtaaaattaaggtttggagggtacagagtggactgtgtttgagg
aaattcgagaaggcgcattcaaaaggcgtgacttgcctacagtttagcagagataacagt
caaatattgtcagcctcgttcgataccagtataagggtacacggtcttaaatctggaaaa
actctcaaggaatttcgcggtcactcttcatttgtgaacgaagtcgttttttcttcggat
ggtcataatataattagcgcgtcgtcggatggaactgtaaaaatttggagcttgaaaact
accgaatgcataggcacttacaaatcattgggagccgctgatctcacagtgaatagtata
catacccttcctcgaaatccggagcacttcgtcgtgtgcaatcgttctaacacggtagta
attatgaatatgcaagggcaaatagtgagatcgttttctagcggtaaacgagagggaggt
gactttgtaactacagtggtgagtccacgtggcgaatttatctattgcgttggtgaagat
cttgtactgtactgtttttccacatcgtcgggaaagctcgagagaacgctcaatatacac
gagaaggatgtaatcggcttggcgcatcatccccatcaaaatttattatgttcttacagc
gaggacggtctgctaaaactatggaaaccatga

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