Atta cephalotes (leaf cutting ant): 105622040
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Entry
105622040 CDS
T04923
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
acep
Atta cephalotes (leaf cutting ant)
Pathway
acep03020
RNA polymerase
acep03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
acep00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
105622040
09124 Replication and repair
03420 Nucleotide excision repair
105622040
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
acep03021
]
105622040
03400 DNA repair and recombination proteins [BR:
acep03400
]
105622040
Enzymes [BR:
acep01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
105622040
Transcription machinery [BR:
acep03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
105622040
DNA repair and recombination proteins [BR:
acep03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
105622040
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
105622040
NCBI-ProteinID:
XP_012058865
UniProt:
A0A158NMV7
LinkDB
All DBs
Position
Unknown
AA seq
1178 aa
AA seq
DB search
MSNIFGLEDDQYDEEDKEEISSKLWQEACWILINAYFDEKGLVRQQLDSFDEFIEMSVQR
IVEDSPQIELQAEAQHTTGEIEKPVKHLLKFEQIYLSKPTHWEKDGAPSPMMPNEARLRN
LTYSAPLYVDITKTIEKDGEDPVETQHQKTFIGKIPIMLRSKYCLLAGLSDRDLTELNEC
PLDPGGYFIINGSEKVLIAQEKMATNTVYVFSMKDGKYAYKAEIRSCLEHSSRPTSTLWI
NMMAKSGASIKKSAIGQRIIAIIPYIKQEIPIMVVFRALGFVADRDILEHIIYDFDDPEM
MEMVKPSLDEAFVIQEQNVALNFIGTRGAKPGVTKEKRIKYAREILQKEMLPHVGISDFC
ETKKAYFLGYMVHRLLSASLGRRELDDRDHYGNKRLDLAGPLLAFLFRGLFKNLMKEVRL
YAQKFIDRGKDFNLELAIKTKIITDGLRYSLATGNWGDQKKAHQARAGVSQVLNRLTFAS
TLSHLRRVNSPIGRDGKLAKPRQLHNTLWGMLCPAETPEGAAVGLVKNLALMAYISVGSQ
PSPILEFLEEWSMENLEEIAPSAIADATKIFVNGCWVGIHRDPDQLMATLRKLRRQMDII
VSEVSMVRDIRDREIRIYTDAGRISRPLLIVEGQNLLLQTRHINMLKERDYNNDGWQELV
GSGVVEYIDTLEEETVMIAMSPDDLRQEKEYAYCTTYTHCEIHPAMILGVCASIIPFPDH
NQSPRNTYQSAMGKQAMGVYITNFHVRMDTLAHVLYYPHKPLVTTRSMEYLRFRELPAGI
NSIVAILCYTGYNQEDSVILNASAVERGFFRSVFYRSYKESESKKIGDQEEQFEKPSRLT
CSGMRNAIYDKLDDDGIIAPGIRVSGDDVIIGKTITLPETDDELDSTTKRFTKRDASTFL
RNSETGIVDQVMLTLNSEGYKFCKIRVRSVRIPQIGDKFASRHGQKGTCGIQYRQEDMPF
SSEGLTPDIIINPHAIPSRMTIGHLIECIQGKVSANKGEIGDATPFNDAVNVQKISTLLQ
EYGYHLRGNEVMYNGHTGRKINAQVFLGPTYYQRLKHMVDDKIHSRARGPVQILVRQPME
GRARDGGLRFGEMERDCQISHGAAQFLRERLFEVSDPYRIHICNFCGLIAIANLRNNTFE
CKGCKNKTQIAQIRLPYAAKLLFQELMAMNIAPRLMTL
NT seq
3537 nt
NT seq
+upstream
nt +downstream
nt
atgagtaatattttcggtctcgaagacgatcaatatgatgaggaagataaagaagaaatt
tcgtcaaaactttggcaagaagcctgctggatcctcatcaacgcatattttgatgagaaa
ggacttgtacgacaacaactggatagtttcgatgaatttattgaaatgtccgttcagcgt
attgtggaggattcaccacagattgaactacaggcggaagcgcaacacaccacaggcgag
atagaaaagcctgtgaaacatttgttgaaatttgagcagatttacttgtcgaagccaact
cattgggaaaaagatggtgcaccatctcctatgatgcccaatgaagctagattgagaaat
ttaacatattccgcgccattgtacgtggatatcactaagacgatcgaaaaggatggtgaa
gatccagttgagacgcaacatcaaaaaacatttataggcaaaattccgattatgttgaga
tcaaagtattgtttactcgctggcttatctgatcgtgacttgacggaattgaacgaatgc
ccgttggatcccggcggatattttattattaatggttcggagaaagtccttatagctcaa
gaaaaaatggcgacgaacactgtctacgtattcagcatgaaagacggtaagtatgcttat
aaggcggaaatacgctcatgcttggaacacagctcccgtccaacttcaactctatggatc
aatatgatggccaagagcggtgccagtattaaaaagtctgctataggccaacgtatcatt
gccattattccttacattaaacaggaaatccccataatggtggtttttcgagcactcgga
tttgtggccgatcgcgatatcctcgaacatattatttacgatttcgacgaccctgagatg
atggaaatggtgaagccatccttggatgaagctttcgtcatacaagaacaaaatgtcgct
ttgaattttatcggtactagaggcgccaagccaggagtaacaaaggagaagcgaattaaa
tatgcccgagaaatcttacaaaaggaaatgctgcctcacgttggcataagtgatttctgt
gaaactaagaaggcatatttcctcggctatatggtccatagattattatcggcatctcta
ggacgaagggaattggacgaccgcgatcattacggtaataagagattggacttagctggg
cctctgttagcatttttgttccgaggtttgtttaagaacctaatgaaggaggtacgtctg
tacgcacagaagttcatagatcgagggaaggactttaatctcgagctggccatcaagaca
aaaattataacggatggtctaaggtactcgcttgctactggtaactggggcgatcagaag
aaggcgcatcaagcaagagcaggtgtgtcacaagtattgaataggttgacttttgcgtca
acactgtcgcatctaagacgagtgaattcgcctattggaagagatggtaaacttgccaaa
ccacgtcaattgcacaacaccttatggggtatgctctgccccgcggagactcctgagggt
gctgctgtaggactagtgaaaaatctagccctgatggcatatataagcgttggatcgcag
ccatctcctattctggaattcttggaggaatggtccatggagaatctggaagagatagca
ccgagcgcaatcgccgatgctacaaagatattcgtgaacggatgttgggtcggcatccat
cgagatccggatcaattgatggccactttacgtaaattgagaagacagatggatattatt
gtgtcggaagtatcgatggttcgcgatattagagaccgtgagataaggatatacacggat
gctggcaggatcagcagacctttgctcatagtggaaggtcaaaatttattactgcagaca
agacatattaacatgttgaaggaaagagattacaacaatgacgggtggcaagaattggta
ggtagcggtgtagtggaatatatagataccctggaggaagaaactgttatgatagctatg
tcacccgatgatctcagacaagagaaagagtacgcatattgtacaacgtacacgcactgc
gagattcatccggcgatgattttgggtgtgtgcgcttccattataccgtttcccgatcat
aaccagagtcctagaaatacttatcagagcgctatgggtaaacaagctatgggtgtatac
attacaaactttcacgtgcgcatggacactttggctcacgtactatattatcctcataaa
ccattggttacaacgagatctatggaatatcttagatttcgcgaattaccggctggcatt
aacagcattgttgcaatcctgtgttacacgggatacaatcaagaagatagcgttatcttg
aatgcgagtgccgttgagaggggtttcttcagatcggtgttttatcggtcttataaggaa
tccgagtcgaagaagattggtgatcaggaggaacaattcgagaaaccctcgcgcttaact
tgttcaggtatgcgcaatgctatatatgacaaattggacgatgatgggatcattgcgcct
ggaattcgagtatcgggtgacgatgtaatcataggaaaaacgataaccttaccagaaaca
gacgacgagctggacagtacaacaaaacgttttacgaaacgtgacgcgtcgactttcttg
cgaaacagcgagaccggtattgttgatcaggtgatgttgacattgaatagcgaaggatat
aaattctgcaagatccgagtgcgcagtgtacgtattccgcaaatcggcgacaaatttgcg
tcgcgtcacggacaaaaaggtacatgtggaattcagtacagacaagaagacatgcctttc
tcttctgaaggtcttacacccgacattattatcaatcctcacgctatcccttctcgtatg
actattggtcacttgattgaatgcattcaagggaaagtttctgccaataaaggagagatt
ggtgacgccactccatttaacgacgctgtgaatgtgcagaagatttccacgcttttgcaa
gaatatggttatcatttgcgaggaaatgaagtgatgtataacggacatacaggtcgtaag
atcaacgcgcaagtctttttaggaccgacatattatcaacgtttaaagcatatggtagat
gacaagatccatagtagagcaagaggacctgtgcaaattttagttagacaacctatggag
ggacgagcgagggatggtggacttcgtttcggagagatggaacgagattgccaaatttct
cacggcgcagcgcaatttctacgagaacgtttgttcgaagtatcggatccatatagaatt
cacatatgtaatttttgtggtttaattgctatagcaaatttgcggaataatactttcgaa
tgcaaaggttgtaaaaacaagacgcaaattgcacaaattagactaccgtatgcggcgaag
ttacttttccaggaattaatggcaatgaatatcgcacctagactcatgacactttga
DBGET
integrated database retrieval system
