Atta cephalotes (leaf cutting ant): 105622127
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Entry
105622127 CDS
T04923
Name
(RefSeq) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
acep
Atta cephalotes (leaf cutting ant)
Pathway
acep03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
acep00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
105622127
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
acep03021
]
105622127
03036 Chromosome and associated proteins [BR:
acep03036
]
105622127
Transcription machinery [BR:
acep03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
105622127
Coactivators
SAGA/TFTC/STAGA complex
105622127
Chromosome and associated proteins [BR:
acep03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
105622127
STAGA complex
105622127
TFTC complex
105622127
SAGA complex
105622127
SLIK complex
105622127
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
Beta-prop_WDR5
WD40
Beta-prop_THOC3
WD40_Prp19
Beta-prop_WDR3_2nd
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
EIF3I
TFIID_NTD2
Beta-prop_WDR36-Utp21_2nd
WD40_Gbeta
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
Beta-prop_IFT122_1st
Beta-prop_WDR75_1st
Beta-prop_Aladin
Beta-prop_WDR36-Utp21_1st
Beta-prop_TEP1_C
ANAPC4_WD40
Beta-prop_RIG_2nd
WDR90_beta-prop_4th
NBCH_WD40
Beta-prop_IFT140_1st
Beta-prop_SCAP
Beta-prop_WDR41
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_SPT8
Beta-prop_Vps41
Beta-prop_EIPR1
Beta-prop_DCAF4
Beta-prop_Nup120_160
Tricorn_2nd
WD40_like
RMC1_N
Beta-prop_DCAF12
DUF6452
eIF2A
Cytochrom_D1
Beta-prop_WDR35_TULP_N
Motif
Other DBs
NCBI-GeneID:
105622127
NCBI-ProteinID:
XP_012058950
UniProt:
A0A158NN42
LinkDB
All DBs
Position
Unknown
AA seq
589 aa
AA seq
DB search
MKMKRMKSEVISATIESYLKRRHYQTHDYRKGDQLFCQNSDQTTLNATAECGTSQDNSIV
FSAITIDIAAADQAYQRLKKWMSVVLNEKLRIELQGLLYPIFCHLYLEMLHAGNRQAAIQ
FLKTHQNEFMSDTEKDFLEELSSVFSVQDIELRPLVNAFRTRKYKVDLSESAHICLRQYL
TKYGHIILMQIINTHITIIRKTGSLHQMDGEVPEEKSQRYETSINGHVEQPSGTGVDREM
RELQEAIRLIQHNSHQALRLFTVKNAIENASCGLIAPKMDKLAVGFSTAEIRLWAIGDTV
LVKKNDKQTYVSSTCDISPFYKFNEQESTVRSEAGAIILRGHTDVVHDLRFIPEIDILLS
VSSDKDMRAWKLNNYSCTAIYSGHSYPIWCMDTSVFNLYIGTGSHDRTAKLWSLDRTFPL
RIFAGHFLDVNCIKFHPNARYLATGSADKTVRLWSKDDGNLLRVYVGAQSTIYTLAFSPD
GKYLAAAGDDKSIYIWDLATNGLLTELKGHKDTIMNVDWSLDNQYIASASLDGIVRLWPT
QDFIKTLNGGSSSAMLQSETPQIYSTYCSSILSLNYYKKSNSLICIGTK
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atgaagatgaagcggatgaagagcgaggtgatcagcgcaacgatcgagtcttacctaaaa
cggcgtcattatcagacccacgattatcgcaagggcgatcagttgttctgtcagaacagc
gatcagacaacgttgaacgcgaccgcggagtgcggcacctcgcaggacaactcgatcgtt
ttcagtgccattaccattgacatcgctgcggcagatcaggcatatcagcgattgaagaaa
tggatgagcgtcgtactcaacgaaaaattacgaatagaattgcaaggacttttgtatccg
atattttgtcatctttatttagagatgttacatgctggtaatcgccaagctgcaatccaa
ttcctaaagacgcatcagaatgaatttatgagtgatacagagaaagacttcttagaggaa
ttatctagtgtattttcggtgcaagacattgagctgagacctttggtaaatgcgttcaga
actagaaagtataaagtagatctgtccgagtcggcacatatttgtctgagacaatatctt
accaaatatggacacataatattaatgcagattataaatacacacatcacaataattaga
aaaacaggcagccttcatcaaatggatggagaagtacctgaagagaaaagtcaaagatat
gaaacaagtattaatggtcacgtggaacaaccatctggtactggtgtggatcgtgaaatg
agggaattgcaggaagctatacgattgatacaacataattctcatcaagcattaagatta
tttacagtgaaaaatgctatagagaatgcaagttgtggtcttattgcacctaaaatggat
aagttagctgtaggttttagtacagctgaaatacgtttatgggctataggcgatacagtc
ttggtcaagaaaaatgataagcaaacgtatgtttcgtctacctgtgatatatcaccattt
tataaattcaacgagcaagaaagcacagtaagaagtgaagcaggagccataatattaaga
ggacatacggatgtagtacacgatttaagatttattccagaaatagatattcttctttct
gtatcgagtgataaagatatgagagcatggaaactcaataattattcatgtacagcaata
tatagcggtcatagttatcctatatggtgcatggatactagtgtgtttaatttatatatc
ggcacaggctcacatgacagaactgcaaaattatggtcattggatagaacatttcccttg
agaatatttgcaggtcattttttagatgtcaattgcataaaatttcatccaaacgcaaga
tacttagcgactggttccgctgataaaactgtaagattatggtcaaaagatgatgggaat
ctattgcgagtatatgttggagcgcaatcgactatttacactttagcttttagtccagat
ggcaaatatctggctgctgcaggtgacgataaatccatatatatatgggatttagcaact
aatggtttactgactgaattgaaaggtcataaagatacaatcatgaatgtagattggagt
ttagataaccaatatatcgccagtgcaagcttagacggaatcgtacgattgtggcctact
caagatttcatcaaaacattgaatggaggatcgtcaagtgctatgttgcaatcagaaacg
ccacaaatttattcaacgtattgctcaagcattctctcattgaattattacaaaaaaagt
aattcgttaatttgtatcggtactaaataa
DBGET
integrated database retrieval system
