Atta cephalotes (leaf cutting ant): 105622491
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Entry
105622491 CDS
T04923
Name
(RefSeq) LOW QUALITY PROTEIN: fibril-forming collagen alpha chain-like
KO
K19719
collagen type II alpha
Organism
acep
Atta cephalotes (leaf cutting ant)
Pathway
acep04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
acep00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
105622491
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
acep00536
]
105622491
Glycosaminoglycan binding proteins [BR:
acep00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
105622491
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
COLFI
PBP1_TM
Motif
Other DBs
NCBI-GeneID:
105622491
NCBI-ProteinID:
XP_012059298
UniProt:
A0A158NP40
LinkDB
All DBs
Position
Unknown
AA seq
1510 aa
AA seq
DB search
MRGRALELITGLLVIQLLLPLPDQVNAMKNRLRKQRSKPQEHRQSSNDYEYDYNYENYDE
YDEKNETTTILPSRTISDITQLSEKFEITTEAFLRREKTPTDLPAPTTTQFYDHGRSEEI
SSTSTRDHSVLPTEILPSESNIYSSVAIPGPRGSPGRPGDDGRPGDSGFPGQPGTPGIPG
PPGPPGPVPDVSLYYQQLALSQANEDKGPSGAAASLYGPEASYIQTQVGPMGPRGPPGPS
GPPGPQGFQGTRGETGELGSPGPSGMPGPRGLPGLPGKDGISGEDGETGPSGSPGAMGQR
GLPGIPGLPGLKGHRGFPGLDGVKGEQGTSGEKGSMGSPGPMGPVGPMGPAGPRGERGRE
GPSGPPGLRGLDGIAGPPGQPGVIGKPGSPGFPGNPGVKGDQGSQGSTGNQGLQGPRGXD
SESGRPGQPGETGPQGPQGKDGIPGEKGATGAIGPVGMVGFPGARGQPGTPGNPGIPGAK
GAPGLPGDRGLKGDTGVKGDAGMPGPRGLPGSPGNEGKRGKRGMQGPIGSVGPPGERGVS
GERGFPGSDGLIGPQGQPGDRGPPGAIGSKGATGDPGRPGPAGLQGARGLMGRPGATGKP
GNPGERGIQGADGKPGEQGLPGLQGLPGPIGSPGERGYSGERGKDGEPGNPGSPGPRGDT
GKEGPPGVAGPPGPSGSDGARGLPGPTGSRGFQGLPGAAGNPGVPGKDGEAGVQGHPGPP
GMVGDRGERGFPGERGLIGPPGPIGPRGETGTQGSDGLIGLPGSKGDKGSFGSPGLLGLP
GARGLPGEPGLKGERGTIGPIGPEGPSGHIGERGPQGEVGPPGSPGEPAERGDPGPPGLI
GEPGAPGNPGERGPHGLQGSQGFPGPQGLIGLPGLKGDRGYPGLKGEQGNPGLPGSHGEI
GAPGPIGVTGAKGIRGDPGVRGEPGLMGPPGIIGHVGPSGPPGNIGPSGAPGLPGVKGDA
GDTGRPGNPGPIGNPGLPGIDGIKGESGSPGSQGLTGSQGPQGPPGERGLPGLPGSPGPI
GNRGLRGAPGEIGQPGKTGVEGPPGPPGLIGSPGAPGHTGEIGPEGPIGKPGPPGIGGRP
GDKGPPGVPGAAGPSGPPGLSGPPGPTGPTGLTGERGPKGETGPQGVEGPQGPRGKPGPA
GLEGIKGDRGEEGQKGAKGHRGFTGLQGLPGSPGLIGEKGIPGLPGLPGKDGESGIRGNP
GREGNPGPTGPVGNPGSRGPPGEEGRQGSPGLPGPPGPPGPPGEVGFGYDAASLAAFIGQ
GQTKGPDPLGDEPPRIFSKDITEKERRELLLKAYENLKLSFQKLMKPDGEKNSPAKTCRD
LFAAYPDKLSGEYWIDPNEGDIRDAILVYCDAEKRATCILPNPSRSPEITHITDQQETWL
SEIDNGMKITYKADSNQIGFLQLLSKHANQNITYHCKNSVAYFDYEKKTYKRGLKLLAWN
DIELIPRGNQRLRYEMIMDECRVYRNKWGKTVVSYETDKPIRLPILDVALRDIGKPEQSF
SIEIGPTCYA
NT seq
4533 nt
NT seq
+upstream
nt +downstream
nt
atgagaggacgggctttagagctgatcacgggacttctcgtgattcagttgctgttgcct
ttaccggatcaagtgaacgccatgaaaaacagactaaggaaacaacgctccaaaccgcaa
gagcatcgacagtctagcaacgattatgaatatgattataactacgagaactacgacgaa
tacgatgaaaaaaacgaaactacaacaatattaccatcacgtacaatatcagatatcacg
caactttcggagaaattcgaaataacaacagaagcatttttgaggcgagaaaaaacacct
acagatttaccagcgcctacaacaactcaattttatgatcatggtagatcagaggagatt
agttccacatctactcgggatcattcagttttacctacggagattttaccaagtgaaagt
aacatatatagttctgtggctataccaggaccacgaggttcacctggtcgacctggagat
gatggtcgtcctggcgattcaggatttcctggacaacctggtacgcctgggatcccaggg
ccacctggacctccaggacctgtacctgatgtatctctttattatcaacaactggctttg
tctcaagcaaatgaagataaaggtccatccggtgcagcggcatcattgtacggaccagag
gcatcttacattcaaacacaagtaggcccgatgggtccgcgaggtcctccaggtccatct
ggtcctcctggtcctcaaggttttcaaggtacacgaggtgaaaccggtgaactgggttct
ccaggcccttctggtatgccaggtcctaggggtttaccaggattgcctggaaaagacggt
atcagtggagaagatggtgaaactggtccatcaggatcgcctggtgctatgggacaacgt
ggtcttccaggaatacctgggcttccaggattgaaaggtcaccgtggttttccaggtcta
gatggtgtcaaaggtgagcaaggaacttctggtgaaaaaggatctatgggttcgcctggg
ccgatgggaccagtaggaccgatgggtccagctggacctcgcggtgaaagaggtagagaa
ggtccgtcgggacctcctgggttgagaggcctcgacggaattgctgggccacctgggcaa
cccggtgttataggcaaacctggctcaccaggttttccaggcaatcctggagttaagggt
gatcaaggatcgcaaggatcgacaggaaaccagggtttgcaaggcccgcgggggtaagat
agcgaaagtggccgtccaggacaacctggtgaaactggtccacaaggtcctcaaggcaaa
gatggaattccgggtgaaaaaggagccactggagcaataggacccgttggtatggtcggg
tttccgggtgctcgaggtcaacctggaacaccgggtaatcctggtatccctggcgccaaa
ggagcacctggccttcctggtgatagaggtttgaaaggagatactggagtgaaaggtgat
gcaggaatgcctggtccgcgtggacttccgggatctcctgggaatgagggcaaaagaggc
aaaaggggtatgcaaggaccaatcggctctgtaggacctcctggagaacgcggcgtatct
ggagaacgtggttttcctggatcagatggtctcatcgggcctcaaggacaacctggtgat
cgtggtcctccaggagctattggatcaaaaggtgctactggagatcctggacgacctgga
ccagcaggattacagggtgcacgtggtttaatgggtaggcccggagccaccgggaaacca
ggtaatcctggggaacgtggaattcaaggtgcggatggcaagcctggagaacagggacta
cctggtctgcagggtctaccaggaccaataggatcaccaggagaaagaggatattctgga
gaacgtggaaaagatggtgagcctggcaatccaggttcacctggtccaagaggagatact
ggtaaagaaggacctccaggagtagcgggtccaccaggcccatcaggaagcgacggcgca
cgaggtcttccggggcccactggctctagaggttttcaaggtcttccaggtgccgcaggt
aatccgggtgttccaggcaaggacggagaagcaggagtacaaggacatcccggtccgccg
ggaatggtcggcgatagaggcgagcgaggatttccgggagaaagaggacttattggacct
ccaggacctataggacctagaggagaaaccggaacacaaggctctgacggtcttattggt
ttaccaggatccaaaggagacaaaggaagtttcggttcaccgggattattaggacttcct
ggcgcgagaggattacccggagaacctggactgaaaggagaaaggggcacaatcggacca
atcggacccgaaggtccctcaggacatattggagagcgtggtccacaaggagaagttgga
cctcctggctctcctggagaaccagctgaacgaggtgatccaggtcctcctggtctcatt
ggtgagcctggagctcctggtaatccaggagaaagaggacctcatggattacagggctca
caaggttttccaggcccacaagggttaatcggacttccgggtctgaaaggtgatcgtgga
tatccgggtttaaagggagaacaaggaaatccgggactacctggtagtcacggcgagatt
ggagcacctggacctattggagttactggtgctaagggaatcagaggtgatcctggagta
cgaggtgaacctggtttaatgggcccacctggtattataggacatgttggaccatcagga
ccacctggaaatataggaccatctggtgctcctggattgcctggtgtcaaaggtgatgcg
ggcgatactggacgtcctggaaatccaggtccaattggtaaccctggtctacctggaatc
gatggaattaaaggcgaaagtggatctccaggctctcaaggactaacaggttctcaagga
cctcaaggtccgcctggcgaaagaggtttaccgggcctacctggttcccctggtcctata
gggaatagaggattacgcggagctcccggtgaaataggacaacctggaaaaacaggagtg
gaaggtccgcctggacctcctggattaataggttctccaggtgctccaggtcatacagga
gaaataggaccggaaggaccaattggaaaaccaggtccaccaggtataggaggtcgacca
ggtgataagggaccacctggagtacctggtgctgcaggaccatcaggtcctcctggatta
tctggaccacctggacctaccggacctaccggacttactggagaacgtggtccgaaaggt
gaaacagggccgcaaggtgtagaaggtccacaggggccacgaggaaaacccggcccagca
ggtcttgaaggtataaaaggggatcgcggagaagagggacaaaaaggagctaaaggacat
cggggatttactggtttacaaggattacctggatctcctggtttaataggagaaaaaggt
atacctggtctaccaggacttcctggtaaagacggagaatcaggtattagaggtaatcct
ggacgagaaggcaatcctggtcctaccggacctgtgggaaatcctggatcaagaggtcca
cctggggaagaaggtcgccaaggatcaccgggtcttccaggacctcctggaccacctggt
cctcctggagaagtgggtttcggttacgatgcagcgtctttagcagcatttataggacaa
ggccaaaccaaaggaccagatccacttggagatgaaccaccaagaatatttagtaaagat
atcactgaaaaggaacgaagagaattacttttgaaagcatacgaaaatttaaaattgtcg
ttccaaaaattgatgaaaccggatggtgaaaagaattcgcctgctaaaacttgtcgagat
ctatttgccgcttacccggacaaattatctggcgagtattggattgatccaaatgaagga
gatattcgagacgcgattttagtgtattgcgatgctgagaaacgtgcaacttgcatttta
ccaaatccatcgcgttcaccagagatcactcacatcactgatcaacaggaaacctggttg
agtgagatagataatggcatgaagattacatataaggcagatagtaatcaaatcggtttc
ttgcaattgctctcgaaacatgcgaatcagaacatcacgtatcattgtaaaaatagcgtg
gcttactttgattacgaaaagaaaacatataaaagaggcttaaagcttttagcttggaac
gatattgaattgataccgcgaggtaatcagcgtcttagatatgaaatgataatggatgaa
tgcagggtttatcgaaacaaatggggtaaaactgttgtttcgtacgaaacggataaaccc
ataagacttcctatattagacgtggctctacgagatattggaaaacccgaacagagtttt
tctattgagatcggtccaacttgttatgcttaa
DBGET
integrated database retrieval system
