Atta cephalotes (leaf cutting ant): 105622521
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Entry
105622521 CDS
T04923
Name
(RefSeq) probable helicase with zinc finger domain
KO
K25168
helicase with zinc finger domain [EC:5.6.2.-]
Organism
acep
Atta cephalotes (leaf cutting ant)
Brite
KEGG Orthology (KO) [BR:
acep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acep03019
]
105622521
Messenger RNA biogenesis [BR:
acep03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
Other 5'-3' decay factors
105622521
3'-5' decay
Other 3'-5' decay factors
105622521
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_12
AAA_11
AAA_19
AAA_30
UvrD-helicase
ResIII
AAA_22
AAA_7
AAA_5
PhoH
Mg_chelatase
P-loop_TraG
AAA_16
PAM2
SRP54
Terminase_6N
Motif
Other DBs
NCBI-GeneID:
105622521
NCBI-ProteinID:
XP_012059326
UniProt:
A0A158NP68
LinkDB
All DBs
Position
Unknown
AA seq
909 aa
AA seq
DB search
MAAAEHQTNNSKENFPYFTDFPERIRCGWFRSNDPDTILTCEPLPNVDVYLYGSANCRIV
GKKGNYEWTFSIFTKGGQELQNVALISDDHRANFFLKSVQKKDGVKIGVTNGQEWWHGPY
LGDSQEDKRQYLVTVGFTAKKHSTYRQDLVFGFLNAPVYLQRICADYLLIKDYERIQKAT
NYQQSQISLRWKNPYEFYSPFMPHANPRETKLSRIYPCPDRQNFVLTQNTLSDNRLTPKN
YRGRMHELITLEEVARHEQISRYNQLSWLRLMSHYVLFNSDASTIVKYTPPGELFAQIPL
SRDILEDTQSGRLLQRSCNSVLLKLWGKETKFNIFEAHIEDKNSHSIHVRLSKECVACWD
LKEHNELEVEVQFMLNRLNFCEWHLAVDSLEDMNLVFLMDEQHKTDKEIVYDFLQVDSGN
LSILSNLLLDSPLNHEQKQAVTVITLSIKTSPPVLLLGPFGTGKTFTIAHMLRMLVQNTN
NRILLCTHSNSAADLYIKEFFHIWYNKDKDIRLKPVRIYYKLRSLNTVHPTVQKYCLMDE
HGRFRDPVAADLQDCGLIVTTLATSSCLMSLKLSPTHIVIDEAAQAMECEALIALTLANR
ETRLLLAGDQMQLAPEIYSVLANERGLGISLLERMYAYYPPEHPCRIHLCQNYRAHADII
KYTSETFYDGMVKPANMKLLKHPVFKPLIFYAVNGAEEQATCSTGYHHATEAEELANRVL
ELRRAWPTQQWGPYNDGSIGVLSYYPEQVQRLRIELRKRLLFDVSVERVLNVQGKQFTAV
FISTVRTRISDRSSAEVKIKDYGFLTDPRLLNTALTRAKCFVAVVGDPVALLTIGCCKDL
WKKYLEMADLYGMDRKELQSHLNQVSKIQISPLNPHAREFFPRAPPLCFVQYIQVPVWYP
LIYPPQQPM
NT seq
2730 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgcggaacaccagacgaacaacagcaaagaaaactttccatatttcacagac
tttcccgaacggatacgatgcggatggttcaggtccaacgacccggacacgatcctcacg
tgcgagccgctgcccaacgtagatgtctatttgtatggtagtgctaactgcaggatcgtt
ggtaagaaaggcaactacgagtggactttttcgatctttacgaaaggcggtcaagagtta
cagaatgtggctttgatatccgacgatcatcgagccaatttcttcctgaagtcagtgcaa
aagaaggacggtgtaaaaatcggagtgacgaatggccaggagtggtggcatggtccctac
ctgggtgattctcaagaagataagagacaatatctggtgactgttggatttactgctaaa
aaacacagcacatatcggcaagatctggtctttggcttcctgaatgctccagtgtacctc
cagaggatctgtgcagactacttgctcatcaaagattacgaacggatacagaaagcaaca
aattatcagcagtcacaaatatcgttgagatggaagaatccctacgaattctattcaccc
ttcatgccgcacgccaatccacgagagaccaaactatcgcggatctacccatgtccagac
aggcagaactttgtcctcactcagaatacgttgtcagataatcgattaacgccaaagaac
tatcggggtcgcatgcacgagttgatcaccctcgaggaagtcgcacgacacgagcagatt
tcaagatacaaccagctctcgtggttacgtctcatgtcgcattacgtactgttcaacagc
gatgcctccaccatcgttaaatacacgccgccgggtgagctcttcgctcagatcccactc
agtcgggacatcttggaggatacacagagcggcagactcctacagcgcagttgtaatagt
gttctacttaagttatggggcaaggaaacaaagtttaacatcttcgaagctcacattgaa
gataaaaactcgcactccatacatgtgagactaagcaaagaatgtgtggcttgttgggac
ttgaaggagcacaacgaactcgaggtcgaagtacaattcatgttgaatcgtttgaacttc
tgtgaatggcacttggcagtagatagtctcgaggatatgaatctggtgtttctaatggat
gaacagcacaagactgacaaagagattgtctatgactttctacaggttgattccggtaat
cttagtatcctctctaatctactattggactcgccgctcaatcatgaacagaaacaagca
gtcactgtaataacattgtcgattaaaacttcaccaccagtccttttgttgggaccattc
ggcacgggaaagacattcaccatagcgcacatgctgcgtatgcttgtacaaaatacaaac
aaccgaatacttttgtgtacgcatagcaacagcgccgccgatctttacattaaggaattc
ttccatatttggtacaataaggataaagacataagacttaagcctgttaggatatattac
aaactgcgttctttgaatacggtacatccgacggtgcagaaatattgtttaatggacgaa
cacggtcgtttccgcgatccagttgcagcagatcttcaagattgtggtctaatagttaca
acattggcaacatccagctgtctgatgagccttaaattatcaccaactcatatagttatt
gacgaagcggctcaggctatggaatgcgaggcactgatagctctgactttggcgaaccga
gaaactcgcctgcttctggcaggtgatcaaatgcaactcgcaccagaaatctacagcgta
ctagcgaacgagcgaggattgggcattagccttctggagagaatgtacgcgtactatccg
ccggaacatccatgtcggatacatttatgtcagaattatcgcgcacacgcggatataatc
aaatacacatccgaaacattttatgacgggatggttaaacctgctaacatgaaactattg
aagcatccagtctttaaaccattgatattttatgctgttaatggcgcggaagaacaggct
acatgttccacgggatatcaccatgccacagaggcagaagaactagcgaatcgtgtacta
gaattgagaagagcatggccgacgcaacaatggggtccatataacgacggctctattgga
gtcttgtcgtattatcctgaacaagtacaacgattgcgaatcgaattgcgcaagcgttta
cttttcgatgtgtctgtcgagagggtgttaaacgtccaaggcaaacaattcaccgcagtt
tttatcagtacagtccgaacaaggatatctgacagatcgtccgccgaggtaaaaatcaag
gattacggttttttaacggatccacgcttattaaacactgcgttgaccagagcgaaatgt
tttgtagcagtggtaggcgatccagtcgctttgcttactataggttgctgcaaagatctt
tggaaaaaatatctagaaatggctgatttgtatgggatggatcgaaaagaattgcagtcg
catctgaatcaggtttcgaaaattcaaatatcgcctttgaatccgcatgcaagagaattt
ttccccagagcaccgcccttgtgcttcgtgcagtatattcaagtaccggtttggtatcca
ttaatttaccctccacaacagccaatgtga
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