Atta cephalotes (leaf cutting ant): 105622910
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Entry
105622910 CDS
T04923
Name
(RefSeq) E3 ubiquitin-protein ligase parkin
KO
K04556
parkin [EC:
2.3.2.31
]
Organism
acep
Atta cephalotes (leaf cutting ant)
Pathway
acep04120
Ubiquitin mediated proteolysis
acep04137
Mitophagy - animal
acep04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
acep00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
105622910
04120 Ubiquitin mediated proteolysis
105622910
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
105622910
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
acep04131
]
105622910
04121 Ubiquitin system [BR:
acep04121
]
105622910
03029 Mitochondrial biogenesis [BR:
acep03029
]
105622910
Enzymes [BR:
acep01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
105622910
Membrane trafficking [BR:
acep04131
]
Autophagy
Mitophagy
PINK1-Parkin associated proteins
105622910
Aggrephagy
Other aggrephagy associated proteins
105622910
Xenophagy
Other xenophagy associated proteins
105622910
Ubiquitin system [BR:
acep04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
105622910
Mitochondrial biogenesis [BR:
acep03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
105622910
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_14
IBR_2
zf-RING_12
ubiquitin
IBR_1
IBR
Rad60-SLD
Rcat_RNF216
MamS_MamX
DUF7138
Motif
Other DBs
NCBI-GeneID:
105622910
NCBI-ProteinID:
XP_012059709
UniProt:
A0A158NQA1
LinkDB
All DBs
Position
Unknown
AA seq
499 aa
AA seq
DB search
MSFLFNLVKSAFLGMLRLFWFGKQKMSNSLSIYIKTNTGNTLSVELDPKWDIKNLKEIVA
PRMGIAPENIKIIFAGKELHDSIIIEECDLGQQSILHAVRTPKMQDKRRANVSLIEESTS
ETSNLNDSGSKPMNETLMDLSLDESDQQNLSSKEQQESRAHFYVYCSAPCKDVTTGKLRV
KCARCGSGAVTVDRDPQCWPDVLQSRRISVHCENDFCPVTSSTFSDETENQVNYAHFYFK
CAKHPSLGENDEAVPLYLIKPNLKNIPCLACTDIRDIVLVFPCEAGHVTCLDCFREYCTV
RLHERQFEFDTTEGYYTLSCPAGCPNSFIHQIHHFHLLNTEQYERYQRFSTEEHVLRAGG
LLCPRPNCGMGIIPPSTEDDIECRKIQCIGGCGYVFCRICLQGYHVGECESQTSETSISV
FSSRNYSVDLSKANEAKWEEASKKTIQISTKPCPKCRTPTERDGGCMHMVCTRAGCGYHW
CWLCQTEWTRECMGNHWFG
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgagctttttgtttaatttagtgaaaagcgcgtttctcggaatgttgcgattattttgg
tttggcaaacagaagatgtctaattctttaagcatatacattaaaacgaatacaggcaat
actctgtccgtcgagttggatcccaaatgggacataaaaaatctaaaggagatcgttgcg
cctcggatggggatagcgccagaaaacattaaaattatatttgcaggtaaagaactgcat
gattcaataataatagaggaatgtgatttaggacaacagagcattttacatgcagtacga
acgcccaaaatgcaagataaaaggagagcaaatgtaagtcttatagaggaatctacatca
gagacatccaatttgaatgacagtggtagcaaacctatgaacgagacacttatggattta
tccttggatgagtcagatcaacaaaatttatcctctaaagagcagcaggaaagtcgagca
catttttatgtatactgttcagctccctgtaaagatgtgaccacaggtaaattaagggtc
aaatgtgcaagatgcggtagtggtgctgtaactgttgatagagatcctcaatgttggcca
gatgtgttgcaatcaaggagaatatctgtacattgcgaaaatgatttttgtcctgtaact
tcaagtacgtttagtgatgaaacagagaatcaagttaattatgctcatttttattttaaa
tgtgctaagcatcccagtttaggggaaaatgatgaagctgtacccctttatctcataaag
ccaaacttgaagaatattccttgtttagcctgcacagatatcagagatattgtattggta
tttccatgcgaggctgggcatgtgacttgtcttgactgctttcgtgaatattgcacagtt
cgtttacacgagcgacaatttgaatttgatactaccgagggatattatacattgtcttgc
cctgctggatgccccaattcttttatccatcaaattcaccattttcatctccttaacacg
gaacagtatgaaagatatcagagatttagtacggaagaacatgttttacgtgctggtggt
cttttatgtccacgaccaaactgtgggatgggtattataccaccttctacagaagatgat
atagaatgccggaaaattcaatgtattggtggatgtggttacgttttttgcagaatatgt
ttacaaggttatcacgtaggagaatgtgaatcgcaaacatcggaaacatccataagtgtt
ttttcttctagaaattattcagtagacctctcaaaagctaacgaagctaaatgggaagaa
gctagcaaaaaaacgatacagatatctacgaaaccttgtcctaaatgcagaactcctact
gaaagagatgggggttgcatgcacatggtatgcacaagagcaggatgtggctatcattgg
tgttggctatgtcaaacagaatggactagagaatgcatgggtaatcattggtttggataa
DBGET
integrated database retrieval system
