Atta cephalotes (leaf cutting ant): 105623207
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Entry
105623207 CDS
T04923
Name
(RefSeq) probable ATP-dependent RNA helicase DHX35
KO
K13117
ATP-dependent RNA helicase DDX35 [EC:
5.6.2.6
]
Organism
acep
Atta cephalotes (leaf cutting ant)
Brite
KEGG Orthology (KO) [BR:
acep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
acep03041
]
105623207
Enzymes [BR:
acep01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
105623207
Spliceosome [BR:
acep03041
]
Complex C
Other components
Complex C specific factors
105623207
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
HA2_N
DEAD
AAA_22
AAA_19
ABC_tran
nSTAND3
RsgA_GTPase
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
105623207
NCBI-ProteinID:
XP_012059997
UniProt:
A0A158NR39
LinkDB
All DBs
Position
Unknown
AA seq
682 aa
AA seq
DB search
MFRLLFSKPDNTWQEDRPDIDAHSSTQFVYNAHHSLALDMQRQRLPIFKNKDHIIYLLEK
YQTLVLVGETGCGKSTQIPQYLLEAGWCADGKKIGITEPRRVAVTSLANRVADERNCILG
TTVGYCIRFDDYTDETTRIKYMTEGILLRELMRDPLLTSYSVIILDEVHERTLLTDIIMG
LLKKIIRKRKSLRIIVSSATVDAEELRDFFNVNTMKDSNKNNAVIMSVEGRLYPVDVFFL
KEPVANYINGVVDTALKIHNTEESGDILAFLTGLDEVDQAVSLLSEYAKLIKDDKQKLLP
LPMYGSLSNAEQLKVFWRAAKDTRKVIIATNIAETSITIPNIVYVIDCGFVKIPWFEAET
QTNSLVIVPISKASANQRAGRAGRVRTGKIFRLYTEEAYAELFEAISPEMQRSDLAPAIL
QLKALGIDNVLRFNFPSAPPSKNLVAGLELLYTLDAIDSNGNLTMPLGLTMAEIPLEPVL
AKSLITSGEIGCSEEITTIFAMLQVQNVFIQPGGGQSALKARIAHRKFEVEEGDLLTLLN
VYTAFEQNKTPAWCQKYFLNHKVLRRATEIRVQMHKMLKHLDIPLVSCNGNVQQILKCLT
AGLFPKAAYLHYTGTYRTVRGNKDLYIHPNSCLYTLKQPQWLLFCEILQTNKTYMKDLTV
IQPEMLLDAAPHFYERTSLESV
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atgtttcggctgcttttctccaagccggataacacatggcaggaggatagacctgacatt
gatgcccattcatcaacacaatttgtttacaatgcacatcattcgctcgcgcttgacatg
caacgtcaacgattgcctatattcaaaaacaaagatcatattatttacttgttggagaaa
taccagacattggtgttagtcggtgaaacaggctgtggtaaaagtacacaaattcctcag
tatcttcttgaagcaggatggtgtgcagatggaaaaaagatcggcattacggagccaaga
agagtcgcggtcacctctctggcaaatcgcgtggccgacgaacgtaattgtattttaggg
accaccgtcggttattgcatacgcttcgatgactacactgatgaaacaactaggattaag
tacatgacagagggtattctcctaagagaattaatgagagatccattattaacaagctat
tcggtcattatcctggatgaagtgcacgagaggactctcttgactgatattataatgggg
ctgctgaaaaaaataatcaggaaacgaaagagtttgagaattattgtatcgtcagcgaca
gttgatgcggaagaacttcgagatttctttaacgtaaatacgatgaaagattcgaataaa
aataacgcggttatcatgagcgtcgaggggcgattgtatccagtggatgtattttttctc
aaagaaccggtggcgaattatattaatggtgtagtagacacagctctaaaaatacataat
acggaagaatcgggtgatatcctagcattcctcacaggacttgatgaagtcgatcaagct
gtatctcttttatcggaatacgcaaagctcataaaggatgataaacagaaactgcttcct
ttgccgatgtacggatcgctttcgaacgcggaacagcttaaggtattttggagggctgct
aaagacactcgcaaagttatcatagcgacaaatatcgcggaaacgtctattaccattcca
aatattgtttacgtaattgattgcggttttgtcaagataccttggtttgaagcggaaacg
cagacgaatagtctcgttatcgtgcccatatcaaaagcttctgccaaccaacgagccggt
cgcgcaggtcgcgtacgtactggaaaaatatttagattgtacacggaagaggcttatgct
gaattgttcgaagctatttcaccggaaatgcagcgttcagatttggcgccagcgatactg
caactaaaggctctgggcatcgataatgtattgcgtttcaattttccatccgcgccgccc
agcaaaaatctagttgcgggattggaattgctttacacactagatgcgatcgacagtaac
ggaaatttgacgatgccattaggtcttacgatggcagaaataccgttggaaccggtgcta
gcgaaatccttaatcacatctggtgaaataggatgttccgaagaaatcacaacaatattc
gccatgctacaagttcagaacgtttttatacaacctggcggagggcaatcggctctaaaa
gcaagaatagctcatcgcaaattcgaagtggaagaaggagatcttcttaccttgttgaat
gtttacacagcttttgaacagaataaaacgcccgcttggtgtcagaaatatttccttaat
cacaaagttttgcggagagctacggaaattcgcgtgcagatgcataaaatgctgaaacac
ttagacattccattggtatcctgcaatgggaatgttcaacaaattcttaagtgtctgact
gctggtctttttcctaaagcggcgtatttacattatacaggcacgtataggacggttcgg
gggaacaaggatttatacattcatccaaatagttgcttatatactttaaagcagccgcaa
tggttactattttgtgaaattttgcaaacaaacaaaacttatatgaaagacttgactgtc
attcagccagaaatgttgttagatgcggcaccacatttttacgagagaacgtctcttgaa
tctgtttaa
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