Atta cephalotes (leaf cutting ant): 105623274
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Entry
105623274 CDS
T04923
Name
(RefSeq) probable ATP-dependent RNA helicase DDX43
KO
K17043
ATP-dependent RNA helicase DDX43 [EC:
5.6.2.7
]
Organism
acep
Atta cephalotes (leaf cutting ant)
Brite
KEGG Orthology (KO) [BR:
acep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
acep03041
]
105623274
Enzymes [BR:
acep01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
105623274
Spliceosome [BR:
acep03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
105623274
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
KH_1
ResIII
KH_KhpA-B
KH_2
MOEP19
KH-I_KHDC4-BBP
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
105623274
NCBI-ProteinID:
XP_012060063
UniProt:
A0A158NRA5
LinkDB
All DBs
Position
Unknown
AA seq
669 aa
AA seq
DB search
MDNNWESDNRISSRRYDRGYDRGYDHRRGNRRERESQFYRRSNRSFGDNNDSNRQNYNND
SYRKSDEKSDITNGLVMYIDSNNIGRLIGRGGSKIKALQEDSGARINIDKQYNENGQSAV
TLTGTDNAQQRAKSLIEELLTERGGTERSGTKRSITERSNTHENESVQKTTSQPEEKEDI
DWANFDWNKANEEYEECQKQKWAALPPIIKNFYKEDPAIANMPQSVITHFRKTNNNIEIR
RVFENAGSSDENVKIPNPVQTFEQAFHAFPDILKEIRKQNFEKPSPIQCQAWPILLSGQD
LIGIAQTGTGKTLAFLLPALIHIDGQVTPRDERSGPNVLVMAPTRELALQIEKEVGKYSY
HGIKAVCVYGGGNRKAQIDTVTKGVQIVIATPGRLNDLVQANVLDVSAVTYLILDEADRM
LDMGFEPQIRKTLLGVRPNRQTVMTSATWPQGVRRLAQSYMKNPIQVFVGSLDLTAVHSV
TQRIYMAENEDEKIDMMHQFFLEMGPQDKVIVFFGKKSKVDDISSDLALTNIDCQSIHGD
RDQSDREQALEDLKTGAVQILLATDVASRGIDIDITHVLNYDFPRDIEEYVHRVGRTGRA
GRTGESITFMTRQDWHHAKALIDILEEANQEVPEEIYKMAERYDAWKKKKEQEDPYGRSN
RGRRSYRRM
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atggataacaattgggaaagtgataatagaatatcatcaaggagatatgatcgaggttat
gatcgaggttatgatcataggagaggaaatagaagggaacgagaaagtcaattttataga
cgctctaatagatcatttggggataataatgactcaaatagacagaattacaataatgat
tcatatagaaagagtgatgaaaagtcagatattacaaatggactagttatgtacattgat
agcaataacattggaagactcattgggagaggtggcagcaaaattaaagctctacaagaa
gatagtggtgctagaattaatatcgacaaacaatataatgaaaatggacagagtgctgtg
acactaactggtacagataatgcgcaacaacgagctaagagtttaatagaggagttatta
actgaaaggggtggaactgaaaggagtggaactaaaagaagtataactgaaagaagtaat
acacacgaaaatgaatctgtgcaaaaaacaacatctcagcctgaagaaaaggaagacatt
gattgggctaattttgattggaataaagctaatgaagaatatgaggagtgtcagaagcag
aaatgggcagctttacctcctattataaaaaatttttacaaagaagatccagccattgct
aatatgccacagtcagtgataacacatttcaggaaaactaataataacatagaaattaga
cgtgtttttgagaacgcgggaagttctgatgaaaacgtgaaaataccaaatcctgtgcaa
acttttgaacaagctttccatgcgtttccagatatccttaaagaaatacgaaaacaaaat
tttgaaaaaccaagtcctatacaatgtcaggcgtggcctattctactgagtggtcaggat
ctcattgggatagcgcaaactggaacaggaaaaactcttgcctttttactgcctgctttg
attcatatcgatgggcaagtaactccacgtgacgaacgttctgggccaaatgttcttgtt
atggctccaacaagagaattggcattgcagattgaaaaggaagtaggaaaatactcttac
catggcattaaagcagtgtgcgtatacggtggtggaaatcgcaaagcacaaatagacact
gtgacaaaaggtgtgcaaattgtaattgcaactcccggaagattaaatgatttggttcaa
gcaaatgtattggatgtgtcggctgtgacgtatcttatacttgatgaagcagatcgtatg
ttggatatgggtttcgaacctcaaattcgtaagactcttctaggagtacgaccaaataga
caaactgttatgacaagcgctacatggccccaaggtgtaagacgcttagctcagtcatac
atgaaaaatccgattcaagtatttgttggatcacttgacttaacagctgttcattctgta
acacagaggatttacatggctgagaatgaagatgagaaaatagatatgatgcatcagttc
ttcctagaaatgggtcctcaagataaggtcatagtatttttcggtaagaaatcaaaagtg
gacgatatctctagtgatctggctttaacgaatatcgattgtcagagtattcacggtgat
agagatcaatcagatagagaacaagcattagaagatctgaagactggagctgttcagatc
cttctcgcgaccgacgtagctagtcgaggaatcgatattgatattacacacgtactgaat
tatgacttcccacgggatatagaggaatacgttcaccgagtcggtcgtactggacgcgca
ggtcgaacaggtgaaagtattacttttatgacaagacaagattggcaccatgctaaagca
ctcattgatattcttgaagaggctaatcaggaagtacctgaggaaatatataaaatggct
gaaagatatgatgcatggaaaaagaaaaaagaacaagaagatccatacggaagaagcaac
agaggtagacgcagctatcgtaggatgtga
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