Atta cephalotes (leaf cutting ant): 105623380
Help
Entry
105623380 CDS
T04923
Name
(RefSeq) ATP-dependent RNA helicase DHX36
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
acep
Atta cephalotes (leaf cutting ant)
Pathway
acep03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
acep00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
105623380
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acep03019
]
105623380
03012 Translation factors [BR:
acep03012
]
105623380
Enzymes [BR:
acep01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
105623380
Messenger RNA biogenesis [BR:
acep03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
105623380
Translation factors [BR:
acep03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
105623380
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
DEAD
Helicase_C
HA2_C
HA2_N
AAA_22
ResIII
nSTAND3
NPHP3_N
ATPase
ATPase_2
AAA_14
AAA_19
PhoH
NB-ARC
RsgA_GTPase
ABC_tran
NACHT
TAFII28
AAA_16
AAA_23
Motif
Other DBs
NCBI-GeneID:
105623380
NCBI-ProteinID:
XP_012060165
UniProt:
A0A158NRK7
LinkDB
All DBs
Position
Unknown
AA seq
925 aa
AA seq
DB search
MLCFFKMHRRGFRGMSCSYTRHDRDVQSIWRNNQQGLEQIQSTSGNGSTYSQARRPPGLR
GKEIGMYYRNKNREKQKKKTLEVLKLSFHIQQSIKAMLNNAERYYNPVFCANFESEQDNK
YHQFHDTQFKRKFLEIIHGNIQQNLAKAMNVTSKLQRNSDIDRILQNDYRQKHNQDAYNN
MLKFRLKLPAYKKRSEILQLVEDNQVVVISGETGCGKTTQIAQFILDDELETGNGSVTRI
ICTQPRRISAISVAERVAMERAENLGNSVGYQIRLEKQPSRDHGSILFCTTGILLQIMKH
DPALKGFSHVILDEIHERTTESDFVITLLKQVILKRIDLKVLLMSATLNAESFSKYYNNC
PMIHIPGFTYPVKEFYLEDVLSFINHKFPEAPPEPKGHRKHLKRYKEQQYKKEEFLDILQ
PYVRQLMAEKKYETHVIDQLRNPNSENLSLELIEKLVRYICNTKGPGAILIFLPGMMDIS
NLNKMMLGSGCYPSHAYVIYPLHSRMPTVDQKLIFKEPSHGVRKIIIATSIAETSITIED
VVYVIDCGKIKYSKFDLNKNIQTLEPEWVSLANAKQRRGRAGRVKSGECYHLYTKAREMT
FDHYPLPEMLRTRLEEVILQIKILQLGRVKEFLSTVMDPPDLKAIDLSLDLLETLNALDK
DETLTPLGYHLAHLPLDPRTGKMILWGALFSCVDPIFAIAASLTFKDAFYCPLGQEEMAN
KKKLELSMEQCSDHIALAEALRRYEVARQRGNARQFCREYFLSFNTLKLLSEMKAQFAQY
LCEMKFLDSENPSHVGSNKNSDNIALIKAIVCAGLYPNIAVVRRVTKNGVVSWTPEDGSV
RIHPSSVNNRVSSFPSRYLTYFTKQRSTAIFLHDTTCISVPILLFAGPNMSIKREKGQYI
VSINFSENIICEQESAELIQVYRLV
NT seq
2778 nt
NT seq
+upstream
nt +downstream
nt
atgctctgttttttcaaaatgcaccgacgaggttttagaggcatgtcctgctcctacaca
cgacatgatagagacgtacaatcaatctggagaaataatcaacaaggacttgaacaaata
caatctacgtctggaaatggaagcacttactcacaagcacgaagacctcctggactaaga
ggaaaagaaataggaatgtattatagaaacaaaaatagagagaaacagaaaaaaaagact
ctagaagttcttaaattgtcatttcatatacagcaatcaattaaggctatgttaaataat
gcagagagatattacaatccagttttctgtgcaaattttgaatctgagcaagataacaag
tatcatcaatttcatgacacccaatttaaaagaaagtttttggaaattatacacggtaat
atacaacaaaatcttgccaaagctatgaatgtaacttcaaagttgcaaagaaatagtgat
atagacagaatattacaaaatgattacagacaaaagcataatcaagatgcttataataat
atgttgaaatttcgattaaagttaccagcatataaaaaaagatcagaaatattacaattg
gttgaagataatcaagttgttgtcattagtggagaaactggatgtggtaaaaccacacag
attgcacaatttatattggatgatgaattagaaactggaaacggcagcgttactcgaata
atttgcacgcagcctagaagaatttcagccatttctgttgctgaacgcgtagctatggaa
agagcagaaaatcttggaaattctgttggctatcagatacgacttgaaaaacagccatca
cgagatcatggaagtatattattttgtactactggtatattactacaaattatgaaacat
gatccagcattaaaaggtttctctcatgtaatactggatgaaattcacgaacgtactaca
gaaagtgattttgttattacattattaaaacaagttattctaaaaagaatagacttaaaa
gttctcttaatgagtgcaacattgaatgctgaaagcttttcaaaatattataacaattgt
cccatgatacatataccaggatttacttatcctgtgaaggaattttatttagaagatgtt
ttgtcatttataaatcataaatttcccgaggcaccacctgaacctaaaggtcacagaaaa
cacctaaaaagatataaagagcagcaatataagaaagaagaatttttggacatattacaa
ccttatgttagacaacttatggccgagaaaaaatacgaaacacatgttattgatcaatta
cggaatccaaatagtgaaaatctttcattggagctcatagaaaaattagttagatatatc
tgtaatacaaaaggtcctggagctattcttatttttttacctggtatgatggatatatca
aacttaaataaaatgatgttagggtctggatgttatccaagtcacgcatacgtcatctat
cctcttcattcacgtatgccaacagttgatcagaaacttatatttaaagaaccatctcat
ggcgttcgtaaaataattattgcgacttcaatcgctgaaacatcaattactatagaagat
gttgtgtacgtaatagattgcggaaaaataaaatattcaaaatttgacctaaataagaat
attcagactttagagcctgaatgggtatctttagctaatgccaagcaaagacgcggtaga
gctggcagggttaaaagtggagaatgttatcatctgtatacaaaagcacgagaaatgaca
tttgatcattatccgttgccagaaatgttaagaacacgcttagaagaggtaattttgcaa
ataaaaatcttgcaattaggaagagtcaaagagttcctatctaccgttatggatccgcca
gatttgaaagctattgatctgtctctcgacttacttgaaacacttaatgccctcgataaa
gacgaaactttaactcctttaggttatcatttagcacatttgccacttgatcctagaaca
gggaaaatgattttgtggggtgcactgttctcttgtgttgatccaatatttgctattgct
gctagtctcacatttaaagacgctttctattgtccgttaggacaagaggaaatggctaat
aaaaaaaagttagaactcagtatggaacagtgtagtgatcatattgctcttgcggaagct
ctaagaagatatgaagttgcacgtcaaagaggaaatgctcgccagttttgccgagagtat
ttcctctccttcaacacattgaaacttctctctgaaatgaaagctcaatttgcacagtat
ttatgtgagatgaaatttctggatagtgaaaacccaagtcatgtaggctctaacaaaaat
tcggataacatagcgttgataaaagctattgtttgtgcaggattatatcctaacatcgct
gttgtaagacgagttactaaaaatggggtggttagttggacaccggaagatggtagtgtg
cgtatacatccatcgagcgttaacaacagagtttccagctttcctagtcgctacttgaca
tattttacaaaacaacggtccactgccatatttttacatgatactacatgtataagtgta
ccgattttattgtttgctggaccaaatatgtcgataaaacgagaaaaaggacaatatata
gttagcatcaatttttcggaaaacataatttgcgaacaagaatccgcagaattgatacag
gtatacagattagtataa
DBGET
integrated database retrieval system
