Atta cephalotes (leaf cutting ant): 105623483
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Entry
105623483 CDS
T04923
Name
(RefSeq) protein PAT1 homolog 1
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
acep
Atta cephalotes (leaf cutting ant)
Pathway
acep03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
acep00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
105623483
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acep03019
]
105623483
Messenger RNA biogenesis [BR:
acep03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
105623483
mRNA degradation factors
5'-3' decay
Decapping complex
105623483
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ctf8
PLATZ
Motif
Other DBs
NCBI-GeneID:
105623483
NCBI-ProteinID:
XP_012060268
UniProt:
A0A158NRW0
LinkDB
All DBs
Position
Unknown
AA seq
742 aa
AA seq
DB search
MADTFFGFDTTLGENNLEDGLECPLEEDELEEEEYDALNDETFGPDAAIGDWEEDHEKLA
EITESNRLHNQSATNKKSISNINIEDNLSHLVLDKEGIVPRPGVWGSPLNLSLPKAQPRL
SLPNACTVEELERGLIANRPPPGLSKPQTQQQKKSEGSLLFEALSLNEKLQVNGLPPPRF
PPGLGLPGAHPIVVPNIRAPHPQLMQHPRILGLINQAGTVLRYPSPPHLMSHLMPQPVPR
QPLHGSYGFPPQLHPNLGGPQFLRPDHMMPAFPNNQTNHQQHQHSYSHLGNQRNQNRSYY
HNEQQAGHQAFFKNNQYPHRNHDRNNQRPYHHQNYSHNINGNASGEYEHSGKLAIKAHEK
QWLINIQLLQLNTIQPYVDDHYYVVFCDKRNKQHANREQKDKKHHNNNGYHRDHRDWEPT
PQTASRSAYTPAQFENSLGKLHCSSVTAPRKLIDMDVVSNNDSQSTPQSQQKDTKKTRQL
LLEIERLFTLQFKLEDLSNPLALIPEPQQQQEGESDVNTTKTEPELINMILTCMQQLIQD
DKLASMLSIRKGKTLLLRFLPHLNVTEYSKQLRELWTAIFKGLAVIGRRDCHILTDFYSE
FRRWLDAVKDFDTILRLARALSDSATNHPVKNNSLTFALLNKFGVSAIAAMLEQVEQLCD
TDDSLPSEWSTFVVTIVELIGDSPPCVAPCQPITTNTLKKHLNRISSLKLERYTALAFFI
WFLRFCIQLQNTFKCIRQMRYT
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atggcagacacttttttcggttttgatactacgctcggagagaacaatctagaagatgga
ctggaatgtccattagaagaagatgaacttgaagaggaagagtacgatgcgctaaatgat
gagacatttggtcccgatgctgctattggtgattgggaagaagatcatgagaaacttgcc
gaaattaccgaatcaaatcgccttcataatcagagtgcaacaaataaaaagtctatttct
aacataaatattgaagataatttatcacatttggtattggataaggaaggaatagttccc
cgacctggtgtttggggtagtcctttgaatttatctcttccgaaagctcagccacgatta
tctttaccaaatgcttgtacggtggaagagttggaaagagggcttattgcaaatagacca
ccaccaggtctcagcaaacctcaaacgcaacaacagaagaaatctgaaggttcgcttctt
tttgaggctctctctttgaatgagaaacttcaagttaatggcctacctccaccacgtttt
ccaccaggattgggtctacctggagcacaccctatagttgtgcccaatataagagcacca
catcctcagttgatgcaacatcctagaatattaggcttaattaatcaagctggtactgtg
ttacgttatccttctccaccacatttaatgtcacatttaatgccacaaccagttccaagg
caacctcttcacggctcttatggttttcctcctcaactacatcctaatttaggaggccca
cagttccttcgaccagatcacatgatgcctgcatttcctaacaaccaaaccaatcatcag
caacaccaacattcttactcacatttaggaaatcagagaaaccagaacagatcttactat
cataacgaacaacaagctggacatcaagcattttttaaaaataatcaatatcctcatcgt
aatcatgacagaaataatcaaagaccttatcatcatcaaaattattctcacaacattaat
ggtaatgcttcgggagaatatgaacactcaggaaaacttgctataaaagctcatgagaag
caatggttaattaatattcaattattacaacttaatacaattcaaccgtatgttgatgat
cactattatgtcgtattctgtgataagcggaataaacaacatgcaaatcgagaacaaaaa
gataagaagcatcataataacaatggatatcacagggatcatagagattgggaaccaaca
cctcaaaccgcttcaagatcagcatatacgccagctcaatttgagaattcattaggcaaa
cttcattgcagtagtgtgacagcaccacgtaaacttatcgacatggatgtcgtatcaaat
aacgactctcaatctactcctcagtctcaacagaaggacactaaaaaaacacgacaacta
cttcttgaaattgagagactgtttacacttcaattcaagctcgaagatttgagtaatcca
ctcgctttaattccggaacctcaacaacaacaggaaggggaatctgacgtaaatacgact
aaaactgaaccagaattgataaacatgattttaacatgtatgcaacagttaatacaagat
gacaaattagctagtatgctaagtattcgaaaaggaaagacgttactactgcgtttttta
cctcacctaaatgtgacagaatatagtaagcagttgagagaattgtggactgcgatattt
aaaggtttagccgtgataggccgtagagattgtcatatattaacagatttttattccgaa
tttcgaagatggctcgatgctgtgaaagattttgatactatattgcgattagcaagagca
ttatccgactctgctactaatcatcctgttaaaaataatagcttaacttttgctcttctg
aataagtttggtgtgtctgcaatagcagcgatgctcgagcaagttgaacaattgtgtgac
acagatgattccctgccttctgaatggtcaacttttgtagtgacgatagttgagttgatt
ggtgattcgccaccctgtgttgcaccttgtcaaccaattactacaaatacgctcaagaaa
catctgaaccggatttccagtttaaaactagaaaggtatacagcgctagccttctttata
tggtttctgcgattctgcatccagcttcaaaatacatttaaatgcatcaggcaaatgcgt
tatacataa
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