Atta cephalotes (leaf cutting ant): 105623738
Help
Entry
105623738 CDS
T04923
Name
(RefSeq) probable DNA mismatch repair protein Msh6
KO
K08737
DNA mismatch repair protein MSH6
Organism
acep
Atta cephalotes (leaf cutting ant)
Pathway
acep03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
acep00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
105623738
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
acep03400
]
105623738
DNA repair and recombination proteins [BR:
acep03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
105623738
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
ARM_CUL7_CUL9
PilJ
Motif
Other DBs
NCBI-GeneID:
105623738
NCBI-ProteinID:
XP_012060509
UniProt:
A0A158NSK1
LinkDB
All DBs
Position
Unknown
AA seq
1122 aa
AA seq
DB search
MPKVNTILNYFTSPKTIKKLETTKEERDKSQTPKRDLKNKGFIKNGKENQNTDDKKRSHN
KDTEKEEDESIKPKRRRLIIPDIDSDEDSGDEFKPGSESEESESVSEGDTEQEPSTEEET
PEKKRKTSSVKFKLKQASFRNTKANKKDLKQPSQPVQSQIISNGLSAAHTWPHLKLDFLH
PEKIRDIHRRMLNDPDYDPKTLYVPTEFLINQTPAMRQWWELKSKHFDCVFFFKIGKFYE
LYHMDAVIGVNELSLTYMRGEFAHSGFPEIGYGRYSASLIERGYKVARVEQTENPEMMAA
RCSKMTKPTKFDKVVKREICQVSTRGTRVYTPLDVETSTPNSNYLLSLVEKCDLSSTISS
FGVCFIDTTIGEFYLGQFVDDRCNSRLLTLLAHHPPIHVIYERSNLSQKTLQLINNTLPT
ALKESLQREAQFWSATTVLKKLHEGSYFKKEDSNFAWPEGLKPYLDEGDSLGLTPADNKE
LAVHALGGCVCLLKEFLLEQQLLAQGCFNTYIPPDFSIANSRTGLNYANTMVIDAVTIKN
LRLFGEGSLINVLDHCCTAFGKRLLREWVCRPSCRKIVIIERQEAVQELLDRMDVMQSAR
IILSTLPDLERLLSKIHAQGNAAKMKNHPEGRAIMFEGPTYSKRVIVDFTTTLAKFEEVL
KFIELFEDFKSNLITRYTKYEPNGDFPRLRETLDYFKTAFNHEEAKKQGYIVPKKGVDAE
YDSVLTELADIKKDLDKYLEKQKQHFGVKVTFHGTDRKRYQIEIPESQVKKVDPGYELQS
QRKGFKRYYTAEAKELLTRQMNAEEHKDKVLKDLNRRIFAQFSEKYDMWHAAVYKLATMD
VLISLADYARNGDDMCIPEIHDGSDGEIFIKIKDGQHPCIVSDNFIPNDTLLATDGTASF
MILTGPNMGGKSTLMRQMGLITIMAQIGSYVPASSCCMTLVDRIFTRLGANDDILAGQST
FLVELSETATILQHATPYSLVLLDELGRGTSTYDGTAIAAAVVDALTKLKCRTLFSTHYH
SLVEDYKTNEEVTLAHMACMVETEEEEEVSQETVTFLYKLSEGACPKSYGFNAARLAGVP
SVITKRAHEIASRMEQETNHKHIFNALCKANGVRMRSLIATI
NT seq
3369 nt
NT seq
+upstream
nt +downstream
nt
atgccgaaagtaaatacaatacttaattatttcacatccccgaaaactatcaaaaagtta
gaaacgacaaaggaagaacgagataagtcacaaactcctaagagagatctaaagaacaaa
ggatttattaagaatggaaaagaaaaccagaatactgatgataagaaaagatcacataac
aaggacactgagaaagaagaagatgaatcaataaagcctaaaagacggcgtcttattatt
cctgatattgattctgatgaagattctggagatgaattcaaaccaggttctgaatctgaa
gaatctgaatcagtttctgaaggagatacagagcaagaaccttcaacagaggaggaaaca
ccagagaaaaaaagaaagacgtccagtgttaaattcaagttgaagcaagcaagttttcgt
aatacaaaggcaaacaaaaaagatttaaaacaaccttcgcaaccagttcaaagtcaaatt
ataagcaatggacttagcgctgcacacacttggcctcatttgaaattagatttcttgcat
ccagagaaaataagagacatacatagaagaatgttgaacgatccagattatgatcctaag
acactctacgtacccactgagtttttaattaatcaaactcctgcgatgagacagtggtgg
gaattaaaaagtaagcactttgattgtgtatttttctttaaaatcggtaaattttatgag
ttgtatcatatggatgcagttattggtgttaacgagctcagtctcacatatatgcggggt
gaattcgcgcattccggatttcctgaaattggatatggtcgttattcggcgagtctaata
gagagaggatataaagtcgcacgagttgagcaaaccgagaatccggaaatgatggcagcg
cgttgtagcaaaatgactaaaccgacaaagttcgataaagtggtgaaacgtgaaatttgt
caggtcagtaccaggggtacgagagtatatacgccattggacgtggaaacatctacacca
aactctaattatctattatccttggtcgaaaagtgtgatctcagttcaacgatcagctcc
tttggagtatgctttatagatacaacgataggtgaattttatctcggccaattcgtcgat
gatcgctgcaactcaagactgttgactctgttggctcaccatccaccaattcatgtgata
tacgaacgcagtaatttatcgcaaaagactttgcaacttataaataacactctaccgaca
gcattaaaagagtcgcttcagcgcgaggcacaattctggtctgctactactgtgctgaaa
aaacttcatgaaggaagttacttcaaaaaagaagactcgaattttgcatggcctgagggt
ctgaaaccatatttagacgaaggagacagcttgggtttaacaccggcagataacaaagaa
ttagcagtacacgcacttggaggatgcgtgtgtttgttgaaggagttcttactcgaacag
caattattagcgcaaggttgcttcaatacatatattccgccggatttttcaatcgcgaat
agccgtacaggtcttaattatgcaaacaccatggtgatagatgccgttacgataaaaaat
ctaaggcttttcggagaaggttcactcattaatgtattggatcattgctgcactgcattc
ggcaaaagattgctgcgcgaatgggtttgcagaccatcttgtcgtaaaatcgttattata
gagcgccaagaagctgtacaagagttgctggatcgaatggacgtgatgcaatcggctcgc
ataattttatcaactctgccagacctcgaaagacttttgagcaagatacatgctcaagga
aatgctgctaaaatgaaaaatcatccagaaggtagagccataatgtttgaaggtccgaca
tactcgaagagggtgattgtagatttcactacgacactcgccaaattcgaagaagtgcta
aaattcatcgaattgtttgaagatttcaaaagtaatctgataactcgctacaccaagtac
gaaccgaacggtgatttccctcgtttaagggagacattagactattttaagaccgcattc
aatcatgaagaagctaagaaacaaggctacatcgttccaaaaaaaggagttgacgctgaa
tatgattcagttctgaccgagctcgcagatatcaaaaaagatctagacaaatacttggaa
aaacaaaagcaacattttggcgtaaaagtaacgttccatggaacagataggaaacgttat
caaattgagattcccgagtcgcaagttaagaaagtcgatcctggatacgaattacagtca
caaaggaaaggcttcaaacgttattataccgccgaggcaaaggaacttttgacaagacaa
atgaatgccgaagagcataaggacaaagtgctgaaagatcttaacaggcgaatattcgcg
cagttcagtgaaaaatacgatatgtggcatgcggccgtttacaaattggccaccatggat
gtgcttatctccctcgcggattatgcgcggaacggcgatgatatgtgtattccggaaatt
cacgatggatccgatggcgagatattcatcaagataaaagacggacaacatccctgcatc
gtgtctgataactttataccgaacgacactttattggcaaccgacggcaccgcctctttc
atgattctgacgggaccgaatatgggaggcaaatcgactcttatgcgccaaatgggcctg
atcacgatcatggcgcagataggcagctacgttccagctagctcgtgttgcatgacgctg
gtagatcgtatttttacgcggctgggcgcaaacgacgatattttggccggtcaaagtacg
tttttggttgagctgagtgaaaccgctacaatactgcaacatgctacaccctattcgctg
gtacttctcgatgaattgggacgtggcacgtcaacttatgatggtacggcaatagcggct
gcggtcgttgatgcattgaccaaactcaaatgtcgcacattattctcgacgcattaccat
tctttagttgaagattataaaactaacgaagaagttacgttagctcatatggcatgtatg
gtggaaactgaagaggaggaggaagtgtcgcaagagaccgtgacgtttttgtacaagctc
agcgaaggggcatgtccgaaatcctacggattcaatgccgctcgactggcaggcgtaccg
tctgtaatcacaaagagagctcacgagatagctagcaggatggagcaggaaactaatcac
aagcacatctttaatgctctttgcaaagccaacggtgtcagaatgagaagtctcattgct
accatttaa
DBGET
integrated database retrieval system
