Atta cephalotes (leaf cutting ant): 105623771
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Entry
105623771 CDS
T04923
Name
(RefSeq) pre-mRNA-splicing factor RBM22
KO
K12872
pre-mRNA-splicing factor RBM22/SLT11
Organism
acep
Atta cephalotes (leaf cutting ant)
Pathway
acep03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
acep00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105623771
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
acep03041
]
105623771
Spliceosome [BR:
acep03041
]
Complex B
Other components
Prp19-related factors
105623771
Complex C
105623771
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
STL11_N
zf-CCCH_RBM22
RRM_1
zf_CCCH_4
RRM_occluded
Torus
RRM_YTH1
zf-CCCH_2
zf-CCCH
zf-CCCH_4
Nup35_RRM_2
zf-CCCH_10
RRM_3
zf-CCCH_12
DUF5092
zf-CCCH_PARP12
Motif
Other DBs
NCBI-GeneID:
105623771
NCBI-ProteinID:
XP_012060538
UniProt:
A0A158NSN0
LinkDB
All DBs
Position
Unknown
AA seq
425 aa
AA seq
DB search
MATSKTTNTYNRQNWEDAEFPILCQTCLGDNPYIRMTKEKYGKECKICMRPFTVFRWCPG
ARMRFKKTEVCQTCSRLKNVCQTCLLDLEYGLPIQVRDAALKIKDDLPRSDVNKEYYVQN
IDNEIGKIDPTTPAGAVGKSAAASDLLMKLARTSPYYKRNRPHICSFWVKGECKRGEECP
YRHEKPTDPDDPLADQNIKDRYYGVNDPVADKLMRRAAAMPKLDPPEDKSITTLYIGNLG
DVLTEKQLRDHFYQYGEIRSVTMVPRQQCAFIQYTQRSAAEAAAERTFNKLILGGRRLTI
KWGRSQGRQTVSVAEATREILEPVPGLPGTLPPPPPSESMSSNFFNLQTTPGMMPPMMIP
PPPVAPQFMFPPQIATAAAAAAAAAAAAAAAAPIFPPGTTPIHYPSQDPSRMGASQGIGK
PWPEE
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atggcaacatcaaagaccaccaatacatataatagacaaaattgggaagatgcggaattc
ccaatattgtgtcagacgtgtttgggagacaatccatacattcgtatgacaaaggagaaa
tatggaaaggaatgcaagatatgtatgcgaccatttacagtatttagatggtgtccagga
gcaagaatgagatttaagaaaactgaagtttgtcagacatgcagtcgattgaagaatgtc
tgccaaacgtgtttattggatttagaatatggtttgcctattcaagttcgcgatgctgct
ttaaaaattaaggatgatttaccacgttcggatgtaaataaggaatactatgtacaaaac
atagacaatgaaattggaaaaattgatccgacaacacctgctggtgctgtaggcaagtct
gctgcggctagtgatctgctgatgaaactggctaggacgagtccttattataagagaaac
agaccacacatttgttcgttttgggtaaagggtgaatgcaagagaggcgaagaatgtcct
tatcgacatgagaaaccaacagatcctgatgacccattggcagatcagaacataaaagat
cgttattatggtgtcaacgatccagtagcagataaactaatgcgtagagcagcagctatg
cctaaactagatccaccagaggataaatccatcacaacgttatacattggtaatctgggt
gacgtattaacggagaagcagctgcgcgaccacttctaccaatatggcgagattcgttca
gtgactatggtgccgcgtcagcaatgtgccttcatccaatatacgcaaagaagcgctgcc
gaagcggcagcagaaaggacctttaataaactgatattgggtggaaggcggctcactata
aaatggggccgttcacagggacggcagacggtgtcggtggcagaagcaacgagagagatc
ctcgaacctgtcccaggattacctggcacattaccaccaccaccaccatcggaaagtatg
agtagcaacttcttcaatctgcaaactactcctggtatgatgccgccaatgatgattcca
ccaccaccagtcgctcctcaatttatgtttccaccgcaaatagcaactgctgctgctgct
gctgctgctgctgccgctgctgctgctgctgctgcaccaatttttcctccaggaactacc
cccattcattatccaagtcaagatccgtccaggatgggtgcgtcacagggtataggcaaa
ccttggccagaggaataa
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