KEGG   Atta cephalotes (leaf cutting ant): 105624101
Entry
105624101         CDS       T04923                                 
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm6
  KO
K12625  U6 snRNA-associated Sm-like protein LSm6
Organism
acep  Atta cephalotes (leaf cutting ant)
Pathway
acep03018  RNA degradation
acep03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:acep00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    105624101
  09123 Folding, sorting and degradation
   03018 RNA degradation
    105624101
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:acep03019]
    105624101
   03041 Spliceosome [BR:acep03041]
    105624101
Messenger RNA biogenesis [BR:acep03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     105624101
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     105624101
Spliceosome [BR:acep03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    105624101
SSDB
Motif
Pfam: LSM SM-ATX
Other DBs
NCBI-GeneID: 105624101
NCBI-ProteinID: XP_012060851
UniProt: A0A158NTJ3
LinkDB
Position
Unknown
AA seq 79 aa
MSRKEALSQFIQQIHGRPVVVKLNSGVDYRGVLACIDGYMNIALEQTEEYVNGQLKDKYG
DAFIRGNNVLYISTQKRRN
NT seq 240 nt   +upstreamnt  +downstreamnt
atgagtcgaaaggaagcattatctcaatttatacaacaaattcatggtcgacctgttgtt
gtaaaactgaacagtggcgtcgattacagaggtgtactagcttgtatagatggctacatg
aacatagcacttgaacaaacggaagagtatgttaatggacaattaaaagataaatatgga
gatgcttttatacggggaaacaatgtgttgtacatcagtacacagaaacgtagaaattaa

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