KEGG   Atta cephalotes (leaf cutting ant): 105624122
Entry
105624122         CDS       T04923                                 
Name
(RefSeq) replication factor C subunit 5
  KO
K10756  replication factor C subunit 3/5
Organism
acep  Atta cephalotes (leaf cutting ant)
Pathway
acep03030  DNA replication
acep03410  Base excision repair
acep03420  Nucleotide excision repair
acep03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:acep00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    105624122
   03410 Base excision repair
    105624122
   03420 Nucleotide excision repair
    105624122
   03430 Mismatch repair
    105624122
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:acep03032]
    105624122
   03036 Chromosome and associated proteins [BR:acep03036]
    105624122
   03400 DNA repair and recombination proteins [BR:acep03400]
    105624122
DNA replication proteins [BR:acep03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    105624122
  DNA Replication Termination Factors
   ELG1-RFC complex
    105624122
Chromosome and associated proteins [BR:acep03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    105624122
DNA repair and recombination proteins [BR:acep03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     105624122
  Check point factors
   HRAD17(Rad24)-RFC complex
    105624122
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 Rad17 AAA_22 AAA_16 RuvB_N AAA_14 AAA_11 DUF815 ResIII AAA_5 AAA_19 AAA_24 AAA_30 AAA_7 PhoH DEAD ATPase_2 AAA_assoc_2 AAA_13 RCF1-5-like_lid TniB TIP49 bpMoxR MCM FtsK_SpoIIIE AAA_3 Mg_chelatase nSTAND3 AAA_25
Other DBs
NCBI-GeneID: 105624122
NCBI-ProteinID: XP_012060872
UniProt: A0A158NTL4
LinkDB
Position
Unknown
AA seq 328 aa
MTSSNEQQVNLPWVEKYRPKSLDELISHETIIKTINKYIDENQLPHLLLYGPPGTGKTST
ILACARKLYTSAQFNSMVLELNASDDRGIGIVRGQILSFASTGTMYKSAFKLIILDEADA
MTIDAQNALRRIIEKYTDNVRFCIICNYLSKIIPALQSRCTRFRFLPLAAEQIIPRLNHV
IEAENLKVTEDGKQALITLSGGDMRKVISVLQSTWFAYGAVNEENVYNCVGHPLPRDITS
IVNWLLNESYDTCYKKIQELKLNKGLALQDILTEVHSYVIKIDFPDQLLTDLLCKMAEIE
KRLASGCRDNIQLNSLISAFYSVRDIET
NT seq 987 nt   +upstreamnt  +downstreamnt
atgacatccagcaatgaacaacaagtaaatttaccatgggtcgaaaaatatcgtcctaaa
agcctggatgaacttatttcccatgagacgataataaagacgataaacaagtacattgat
gagaatcaactgccgcatcttcttctctatggaccacctgggacaggaaagactagtact
atactggcgtgtgctcgtaaactctatacttcagctcagttcaattcaatggtattagaa
ttaaatgcttctgatgatagaggtataggcattgtgcgaggccaaatcctgagttttgct
agtacaggcactatgtataagtctgcgtttaaattaattatcttggatgaagctgatgct
atgacgatcgatgctcagaatgcacttagaagaattattgaaaaatacacggataatgta
cgtttctgtattatatgcaactacctcagcaagattattccagctctgcagtctcgttgc
accaggtttagattcttacctcttgcagcggaacaaataataccaagactgaatcacgtc
attgaagcagagaatttaaaagttacggaagacggcaagcaagcattgataacgttaagt
ggtggtgatatgagaaaagtaataagcgtacttcaaagtacatggtttgcttatggtgct
gtgaacgaagagaatgtgtataattgtgttggacatccgttaccaagagatataactagt
attgtaaactggttgttaaatgagtcttatgacacatgctacaaaaagattcaagaactg
aaattgaacaagggtcttgcgctgcaagatatattaacagaagttcactcatatgtaatt
aaaattgattttcctgatcagttacttactgacttattatgcaaaatggcagagatagaa
aaaagattggcttctggatgtcgcgacaacattcaattaaattctcttatatctgcattc
tacagtgttcgcgatattgaaacgtaa

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