Atta cephalotes (leaf cutting ant): 105624654
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Entry
105624654 CDS
T04923
Name
(RefSeq) LOW QUALITY PROTEIN: transcription elongation factor SPT6
KO
K11292
transcription elongation factor SPT6
Organism
acep
Atta cephalotes (leaf cutting ant)
Brite
KEGG Orthology (KO) [BR:
acep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
acep03021
]
105624654
03036 Chromosome and associated proteins [BR:
acep03036
]
105624654
Transcription machinery [BR:
acep03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
105624654
Chromosome and associated proteins [BR:
acep03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
105624654
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
HHH_7
YqgF
HTH_44
SPT6_acidic
S1
SH2
Tex_central_region
HHH_3
HHH_9
Tex_YqgF
Spt6_S1
HTH_10
Tex_N
Motif
Other DBs
NCBI-GeneID:
105624654
NCBI-ProteinID:
XP_012061401
UniProt:
A0A158NV43
LinkDB
All DBs
Position
Unknown
AA seq
1761 aa
AA seq
DB search
MAEYLDSEADVSEGEEELDQNEKKKLRKLKAVEESDDEEEDDEDQLREELKDLIDDNPIE
ESEGEDSDGSDHHKKRKKSDDEDFDDRLEDEDYDLIEENLGVKLERKRFKRLRRIQDEES
EEEQEKEADEERDAIANELFEGSGDEDERRSERSHRPEADTFEEGSDEGEYTDADDFIVD
DDGRPIAEKXKKKKPIFSDAALQEAQDIFGVDFDYNEFDKYGEEDYEEEEEEEEDEYMDE
DADIERPRRPKKQLKKKTTRKSIFEIYEPSELKRGHFTDMDNEIRNTDIPERMQLRSVPV
TSVQEGSDELDLEAEWIYKQAFCKPTVSIQDAHLNAEAKERARKGPQTIGKIKKALDFMR
NQHFEVPFISFYRKEYVLPELNINDLWKVYKFDAKWCQLSQRKENLLKLFDKMRNYQLDE
IMKNPDAPLPDNVRVIKDDDIERLKNAQTSEELNDVYNHFMLYYSHEIQAMQESVRQKEK
QARREERIQRRKQQIAEAEENGEDPPEEEEILEEEEVDDTLKQAVRSGPYSICRKAGLDG
LAKKFGLTPEHYAENLRDNYQRHEVDQEPTEPTAIATEYSSSRFKTAEEVLKAAQLMVAI
QLAREPLVRKCVREMYMERAKMSVKPTKKGIKEIDENHPIYTMKYLKDKPVRDLVGVQFL
NLMIAEEDKLITITLSDAIEGNTSNNYVDEMKQLYCRDEFSKLVQDWNALRVGSVEIALN
RMVIPHLKKELRANLIAEAKECVMRSCCRKMYNWIKVAPYSCEFPEEEDEEWDTSKGLRV
MGLSYVPDYSQAAFTCLIAADGECTDYLRLPHLMKRKNSYREGEKTLKEADLLALKNFIA
TKKPHVIVVAGESREAMMIAADIKECITHLSEEEQFPNIQVEICDNELAKIYANSNKGNS
EFRDYPELLRQAISLARRMQDPLVEFSQLCTADEEILCLKYHNLQDQLPKEELLENLYLE
FVNRVNEVGVDVNKAVQQAYCGNLVQFVCGLGPRKGQALIKMLKQTNQRLENRTQLVTAC
HMGPKVFINCAGFIKIDTNSLGDSTEAYVEVLDGSRVHPETYEWARKMAVDALEYDDEDA
NPAGALEEILESPERLKDLDLDAFAEELERQGFGNKCVTLYDIRAELNSRYKDLRVLYQS
PSAEKLFDVLTKETPETFYVGKLVLATVVGISHRKPQGDQLDQANPVRNEETGLWQCPFC
LKNDFPELSEVWNHFDAGACPGKATGVRLRLDNGISGYIHIKNLSDRHVANPCERVGMGQ
IIHCRIIKIEVDRFSVECTSKSSDLADKNHEWRPQRDPFYDTESEQRDIKVEEDAKKAKQ
RQIYVKRVIVHPSFHNISFAETVKLMQTMKQGEAIVRPSSKGADHLTVTWKVTDDILQHI
DVREEGKENAFSLGQSLWIGNEEFEDLDEIIARHVNPMAAYASELLDFKYYKSTVEGIKD
KAEEILKEQKKENPNGIPYIISAAKTYPGKFLLSYLPRTRCRHEYVTVTSEGFRFRAQMF
GRVSDLLRWFKEHFRDPVPGQSTPSTPRGAMTSRTPYTTTPGTVSGMNQEAIQRVAQNLP
HHMLHSLSQVANQTPHHYPPHTPGAASTTGYGGGHTYPNTPYTPSGQTPFMTPYQTPHHT
PHHSQPTPRYGQQTPSHHQGPFVHPPPPSMTPSHHRSAQSHRPTPPLSTPSGDPMDWKKA
AEAWARLKSGPRVSGSTPRYEESRKTPRSYDESSGRTTPSGRSRPSTRTPSYKSPRGTPH
TNSSPRSMSLSGDGTPLYDES
NT seq
5286 nt
NT seq
+upstream
nt +downstream
nt
atggcagagtatctcgactctgaagcggatgtgagcgagggtgaggaggaattggaccag
aatgagaagaaaaaattgaggaagttgaaggcggtggaggagagcgacgacgaggaggaa
gatgatgaagaccagttacgtgaggaactgaaagatttgatagatgacaatcccatagag
gaaagcgaaggtgaagacagtgatggttctgatcatcataagaagcgtaagaaaagtgat
gatgaagattttgatgatcggttggaagatgaagactatgatctgattgaagaaaattta
ggcgttaagcttgaaagaaaacgttttaaacgtcttcgaagaatccaagatgaggaatca
gaggaagaacaagaaaaagaagcagatgaagaaagggacgctattgctaatgaattattt
gaaggttccggagatgaggacgaaagacggagtgaacgaagtcatagaccagaggcggat
acctttgaggaaggtagtgatgaaggcgaatatactgatgcggatgattttattgttgac
gatgatggtagacctatcgcagagaaanagaaaaaaaagaagccaatattttctgatgca
gcattgcaagaagcacaggatatttttggtgttgattttgattataatgaattcgataaa
tacggcgaagaggattatgaggaagaagaggaagaagaagaggatgaatacatggatgaa
gatgctgatattgaacggccgcggcgaccgaagaagcagttgaagaaaaagaccacaagg
aagagtatcttcgagatttatgagcctagtgaattgaaacgcggtcactttactgatatg
gataatgagatacgtaatacagatataccagaaagaatgcaacttagatctgtaccagtc
acatcagttcaggaaggttctgatgaactggatcttgaagcagaatggatctataagcaa
gcattttgcaagcctacagtctccattcaggatgcccacttgaatgctgaggctaaggaa
cgggctcgaaaaggaccacagactatcggcaagattaagaaagccttggattttatgcgc
aatcaacactttgaagtcccttttatatctttctatagaaaggagtatgtactgcccgag
ttgaacattaatgacttgtggaaagtttataaatttgacgcaaaatggtgtcagttgagc
caacggaaagagaacctgctcaaactatttgataagatgcgcaattatcaactggatgaa
attatgaagaatccggacgcaccattgccagataacgtgcgagtgattaaagacgacgac
attgagcgactgaagaatgcgcagacaagtgaagagctcaatgatgtctataatcatttc
atgttgtattatagtcatgagattcaggcgatgcaggaatccgtgcgacagaaggagaaa
caggcacgacgtgaagagagaattcagcgacgtaaacaacaaattgctgaggcagaagaa
aatggagaggatccgccggaagaggaagaaatactggaggaagaagaagtcgacgataca
ctgaaacaagctgttagaagcggcccatactcaatctgtcggaaggctggtttggatggt
ctagcgaaaaaatttggcctaacacccgaacactacgccgagaatctgcgtgataattat
caacgtcacgaggtggatcaagagccgaccgaaccgacggcaatcgcgaccgagtactcc
agttcgcgatttaagaccgcggaagaagtattgaaagctgctcagttgatggtggcgatt
cagttggcacgtgaaccgctcgtgcgtaaatgcgtgcgcgaaatgtacatggaacgcgct
aagatgtccgtgaagccaacgaagaagggcattaaagagattgatgagaatcatccaatc
tacacaatgaaatatctgaaggacaagccggtacgtgatttagtaggcgttcaattcttg
aatctgatgattgctgaggaagacaaactcattacaattacactcagtgacgctattgag
ggtaacaccagcaataactatgtcgacgaaatgaagcaactctattgccgtgatgagttc
agcaaactcgtacaagattggaatgctttgcgtgttggcagcgtcgaaatcgcccttaat
cgcatggtaataccacatctaaagaaagagttgcgcgcaaatttaatcgctgaggcgaag
gaatgcgtaatgcgctcgtgttgccgcaagatgtacaattggatcaaggttgcaccgtat
agttgtgagttccccgaagaggaggatgaggaatgggataccagtaaaggcctgcgcgtc
atgggcttatcttacgtgcctgattattcgcaggcagcttttacctgtttgattgcggct
gatggagaatgtacggattacctgcgcttaccgcatctgatgaagcgcaagaacagttat
cgcgaaggtgaaaagacgctgaaggaggccgatttactagcgttaaagaactttatagcc
acgaagaagccacatgtgatcgtggtggctggcgagtctcgggaagcaatgatgatcgct
gctgatatcaaggagtgtatcacgcatttgtcggaagaagaacagtttcctaatattcag
gtggagatatgcgataacgaacttgccaagatctacgccaatagtaacaaagggaattca
gagtttcgagattatccggagctgctacgtcaggctatttcgttggcgagaaggatgcag
gatccactagtggaattctcacaattatgcacggctgacgaagagattctctgcctaaaa
tatcacaatttgcaagatcagttacctaaggaagaactgctggaaaatctatatttggaa
ttcgtaaatcgcgtgaatgaagttggcgtagatgtgaataaggcagtccaacaagcatac
tgcggcaaccttgttcaatttgtttgcggtcttggtccacgaaagggtcaggcattgatc
aagatgctgaagcaaacaaatcaacgattagagaacagaacgcagttagttacagcatgt
catatggggccaaaagtattcatcaattgcgctggattcatcaaaatcgacactaatagt
cttggcgacagtaccgaagcgtacgtagaagtgctcgacggttcgcgcgtacatcccgag
acttatgaatgggctagaaagatggcagttgatgcactggaatatgacgacgaggacgcc
aatcctgccggcgctttggaggagatactcgaatcgccagaacgcttgaaagatttggat
ctcgacgcttttgcagaagaactcgagcggcaaggtttcggtaataaatgcgttactctc
tacgatatcagagccgaattaaacagccgatacaaggatcttcgtgtattatatcaatcg
ccgagcgcggaaaaattgttcgatgttttgacaaaggaaacacccgagactttttacgtc
ggcaagctagtgttggctaccgtggtcggcatcagtcatcgaaaaccacagggcgatcag
cttgatcaggcgaatccggtgcgaaacgaagagactggtctgtggcaatgtcctttctgc
ctgaagaacgactttcccgaattatcggaggtatggaatcacttcgatgctggcgcttgt
ccgggtaaagctaccggcgtaagattgcgactggacaatggtatctccggttatattcac
atcaagaatctatcggaccggcacgtcgcaaacccctgcgagagagtcggtatgggacag
atcattcattgccggatcattaaaattgaggtagatcgattcagtgtcgaatgtaccagc
aagagcagcgatctcgctgacaaaaatcatgaatggaggccacagcgagatccattttat
gacaccgaatccgagcaaagagatataaaggtagaagaggacgcgaagaaggcaaaacag
cggcagatttatgtgaaacgtgttatcgtccatccatccttccataatatcagtttcgcc
gagactgttaaattaatgcagacaatgaagcagggcgaagcaatagtgagaccgagtagc
aaaggcgccgaccatttgacagtcacgtggaaagtcactgatgacattttacagcacatc
gacgttcgtgaggagggtaaagagaatgctttttcattgggacaaagcctgtggataggc
aatgaggaatttgaagatcttgacgagattatcgctcgacatgtaaatcctatggccgct
tatgcctccgaattgttggatttcaaatactacaagtccactgtagaaggaatcaaggat
aaagcggaggagatactaaaagaacagaaaaaggagaatcctaatggaattccatatatc
atatcagcagctaagacttatcctggaaagtttttactctcatatctcccgcgcactcgt
tgccgtcacgagtacgttacagtgacatccgagggcttcagatttcgggcgcagatgttc
ggtagagtgagcgacctattacgctggttcaaggaacattttagggatcccgttcctgga
caatccactcctagtacaccgcgcggtgcgatgacttctagaacaccttacactactacg
ccaggaacagtcagcggaatgaatcaagaagcaatacagcgagttgcacagaatcttcca
catcacatgttgcattcgttatcacaagtggcgaatcaaacgccacatcattatccgcca
cacaccccgggagcggctagtactactggctacggcggaggacacacgtatcccaatacg
ccgtacacgccgtctggtcaaactccgtttatgaccccatatcagacgccgcatcataca
ccgcatcacagccagcccactcccagatatggtcaacaaacccctagccatcatcaaggg
ccttttgtacatccgccgccgccatcaatgacacccagccatcacagatctgctcaatcg
cacagacctacaccacctctgtctactccttccggtgatcccatggattggaagaaggct
gccgaagcatgggcacgtttaaaaagcggtcctcgagtctccggatcgacacctagatac
gaagagtctagaaaaactccgcgtagctatgacgaatcatctggcagaacgacgccttcc
ggaagaagtagaccttccacacgtactccatcgtataaatctccgcgaggtactccacac
acgaattctagtccacggagtatgtccctcagcggagatggtactcctttatacgacgag
agctaa
DBGET
integrated database retrieval system
