KEGG   Atta cephalotes (leaf cutting ant): 105625745
Entry
105625745         CDS       T04923                                 
Name
(RefSeq) LOW QUALITY PROTEIN: DNA repair endonuclease XPF
  KO
K10848  DNA excision repair protein ERCC-4 [EC:3.1.-.-]
Organism
acep  Atta cephalotes (leaf cutting ant)
Pathway
acep03420  Nucleotide excision repair
acep03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:acep00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    105625745
   03460 Fanconi anemia pathway
    105625745
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:acep03032]
    105625745
   03400 DNA repair and recombination proteins [BR:acep03400]
    105625745
DNA replication proteins [BR:acep03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    105625745
DNA repair and recombination proteins [BR:acep03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     105625745
SSDB
Motif
Pfam: UPF0669 ERCC4 MAS20 Myc_N SAM_KSR1
Other DBs
NCBI-GeneID: 105625745
NCBI-ProteinID: XP_012062456
UniProt: A0A158NY48
LinkDB
Position
Unknown
AA seq 1031 aa
MSNWLLPEIIDKVHDIVLTNRRVKVRELVEIAYVSALNEELLHYVSDDVPSGSYKYYSLT
YDGNIKIRLTSITGDADLYASQIISKPTYEPDYYCLQSATCGEDTIFIPKSFKRPVSIGV
YGHPSHEISKYTLLVSEVIVEDDTSSYDETSGNTYKTRDRVFMLEYENQMFLDIIQEDGL
VITAKGLGIETVFANVIKAYLDPGNLVIVLGTTDYDERYFIDLLKSYGTSRLPLVVNAEC
SSNEREIMYLEGGVLFISGRILVVDLLKNRVPLHLVTGILVYRAHNILNAYQEAFALRLY
RQNNKTGFIKAFTSSSLAFTVGFSKVERVMKTLFVKKLYLWPRFHATINNCLSKNEPDVI
ELHVHITPKMQSIQSTLLDVMNYVVKELKRLNKYLDLDELTVENAVAKKFHKQLHLQIDP
IWHQLSTTTKQLFSDLKTLRSLIISLTYEDSVSFYAMLNRLRTMEYAMKAGGWIMLNEFE
NLFKYARSRVYTEKNELKPEPNPKWEALSEVLFEIQEQKHKKKDYENIDKVLILVHDNHI
CRQLKNYLTMGANEYLFYEALKKLSHNKEQKTSDDSRKKTKDQPSTSESNIDEETEDTQD
TYVLTLSQKRVEGTQASTSTEDIKHQTLFEECSQLAELNLTREHYAASAPLVFIQAIKKG
GDPMALQRMLTEHIPNNIILYANDIGIVRQLEIYQNNNPSLDLKVYFLIYGGSIEEQEYL
TSLRREKEAFESLITTKITMVVPEDQDGKSDDCLAFAIQSDDANQEDTRKGGKQSKAKII
PKVIVDMREFRSELPAILYMRGIKIEPVTLVVGDYILTPEICIERKSISDLIGSLLSGRL
YNQAVSMTRHYAKPMLLIEFDQNKPFCFQVSNFIKLTXKCVCVEREREREKREREKVKXF
YICHINNYITDTKIICLXQGRDQPDSNVAAKIGADEDTENKQILVEKYNPHIQDFIGKLP
GVHSKNLRVLLNKGKSLDHLMKLSQVQLKEILGNKNDAELLHKALHEKCLTDEGPGTSKV
SKVRVIALCHL
NT seq 3096 nt   +upstreamnt  +downstreamnt
atgtccaattggctgcttccagaaatcatcgataaagtccatgatattgttttgactaat
cgacgagtgaaagtgcgcgagcttgttgagatagcttatgtatcggcactgaacgaggaa
ttgttgcactatgttagtgatgatgtacccagtggctcttacaaatattatagtttgacg
tacgatggtaatattaagatacggttgacatcgataacaggagatgcagatttatatgcg
tcgcagattataagcaaaccgacgtatgaaccggattattattgtctgcaatctgcaact
tgtggggaagatactattttcatacctaagagctttaaacggcctgtaagtattggtgtt
tatggccatccatcgcacgaaattagtaaatatactttgttggtatctgaagtaatagtt
gaagacgatacttcatcttacgacgagacatcaggaaatacttacaaaactcgtgataga
gtattcatgttggaatatgaaaaccaaatgtttcttgacatcattcaggaggatggatta
gttattactgctaaaggtcttggtatagaaactgtttttgcaaatgtgataaaagcttat
ttggatccaggaaatctagtaatagtcttgggaaccactgattatgatgagcgttacttt
attgatctgcttaaaagttatggaacgagtagattaccacttgtagtcaatgcagaatgt
tcttctaacgaaagggaaataatgtatttggaaggtggagtgctgtttatatcaggtcgt
attttagtagtagatttgttaaaaaatagagttccactgcacttggtcactggcattctc
gtctatagagctcacaatatattaaatgcttatcaagaagcatttgcattgcgtttatat
agacaaaataataagactggatttatcaaggcgttcacaagttcgtcattagcttttaca
gttggattttcgaaagtagaacgagttatgaaaactttgttcgttaaaaaattatattta
tggccgcgtttccatgcaactattaataattgcttgtctaagaatgaacccgatgttata
gaattacatgtgcatatcacaccaaagatgcagagcattcaaagtactttgcttgatgtt
atgaattatgtcgtaaaagaattaaagaggctcaataaatatttagatttagacgaattg
actgtggaaaatgcagtagcaaagaaatttcacaagcagttacatttgcaaatagatcca
atttggcatcagctcagtacaacgaccaaacaattgttttctgatttaaaaacattacgt
tcccttattatatctttaacgtatgaagattctgtttcattttatgccatgctaaatcgt
ttacggactatggaatatgctatgaaagccggtggttggataatgttgaatgaattcgag
aatctgtttaagtatgccagaagcagagtttatacagaaaaaaatgaactgaaaccagaa
ccaaatccaaaatgggaagctttatcagaagtcttgtttgagattcaagaacagaaacat
aagaaaaaagattatgaaaatattgataaagttcttatcttggtacacgataatcatata
tgtcgccaattaaagaattacttaactatgggtgcaaatgaatacttattttatgaagct
ctgaaaaaattatcacataataaagaacaaaagacaagtgacgatagtagaaagaaaacg
aaagatcagccatcaacatctgaaagtaacatagatgaagaaacggaagacactcaagat
acttatgtgctcactttgtcacaaaaacgcgtagaaggaactcaagccagtacttctaca
gaagatataaaacatcagacattgtttgaagaatgttcgcaacttgcagaattgaatttg
actagagaacattatgcagcatctgcacctctcgttttcatacaagccataaaaaaagga
ggagatccaatggccttacaacgaatgttaaccgagcatatcccaaacaatattattttg
tatgcaaacgatatcggtattgtgaggcaattagagatatatcaaaataataatccgtca
ttagatttaaaagtgtattttttaatttatggtggatcgattgaggaacaagaatatctt
acttctttacgacgagaaaaagaagcatttgagtctttgattactacgaaaattaccatg
gttgtaccagaagatcaagatggaaaatcagacgattgtttagcttttgcaattcaatca
gatgatgcaaatcaggaagatacgcgtaaaggagggaagcaatctaaagccaaaataatt
ccaaaagttattgtcgatatgagagaatttagaagtgagttaccagccattctctatatg
cgcggtataaaaatcgaaccagtgacattagtggtcggtgattatattttaacaccagaa
atatgtattgagaggaaaagtatatctgatttaattggttctttactttccgggagattg
tataatcaagcagtttctatgacaaggcattatgctaaacccatgcttctcatagaattt
gatcaaaataaaccattctgttttcaggtatctaattttataaaattaacgtaaaaatgt
gtgtgtgtagagagagagagagagagagagaagagagagagagagaaagtaaaatgattt
tatatatgtcatataaataattatattacagatactaaaattatatgtttgtagcaagga
cgagatcagcccgattcaaatgtagctgctaaaatcggagcagatgaagatacagaaaat
aagcaaatattggtagaaaaatataatcctcatattcaagattttataggtaaattacca
ggtgtacattcaaaaaatttgcgtgttctattaaataaagggaaatcattagatcatctt
atgaagctatcacaagtacaactaaaagaaatacttggaaataaaaatgatgctgaatta
ttacataaagctttacacgagaaatgtttaacagatgaaggtccgggaactagcaaagtt
tctaaagtacgtgttatagcattatgtcatctttga

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