Atta cephalotes (leaf cutting ant): 105625807
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Entry
105625807 CDS
T04923
Name
(RefSeq) replication factor C subunit 1
KO
K10754
replication factor C subunit 1
Organism
acep
Atta cephalotes (leaf cutting ant)
Pathway
acep03030
DNA replication
acep03410
Base excision repair
acep03420
Nucleotide excision repair
acep03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
acep00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
105625807
03410 Base excision repair
105625807
03420 Nucleotide excision repair
105625807
03430 Mismatch repair
105625807
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
acep03032
]
105625807
03400 DNA repair and recombination proteins [BR:
acep03400
]
105625807
DNA replication proteins [BR:
acep03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
105625807
DNA repair and recombination proteins [BR:
acep03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
105625807
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
AAA_30
Rad17
AAA_22
RuvB_N
AAA_14
AAA_5
AAA_33
BRCT_2
RNA_helicase
AAA_16
AAA_6
AAA_17
PTCB-BRCT
NTPase_1
AAA_19
AAA_assoc_2
AAA_7
DTHCT
nSTAND3
Viral_helicase1
TsaE
AAA_18
Motif
Other DBs
NCBI-GeneID:
105625807
NCBI-ProteinID:
XP_012062510
UniProt:
A0A158NYA2
LinkDB
All DBs
Position
Unknown
AA seq
1010 aa
AA seq
DB search
MPRDIRSYFAPVATSQKNSEPVALKKSQKRRIISSSDEDEEKPQSSTKRSTVVKRKKSSI
LSDSEDEERVIRDDEKDSSNLTTNKKSKSKEPCKAVPLTELFGKKPIMRVEETKVNQKLQ
KVESKFHDDEDFDAVLKQLDVQDTLIQDKKSKSKNVDNPKKSEAAVKTEVASNKNRKHNN
GLKECDNITNNTSELRSEKVKQSPNKNNVYSKVTNSSPKQNLQKEKKSSSNGDLDISKKD
KDTEKSSRKKAKIMEENLFEERKEMKKQRTIMYEKYLQRGGARNPGSKEIPTGAENCLAG
VSFCITGVLDSLERNEAEDLIQKYGGRIVKSVSNKVNYIMVGDEAGPSKLAKASNLGIKQ
ISEDDLLEMIRTRPEGKAADIKPTKAKSNVKKIFRKFESDELSSPNKTKALLDSPKKIKI
PPSLSVKTSVNTETLPTSKQDLDASNNTQKIITSIRSEPLVERYRPKTMKQIIGQQGDKS
CAHNLYIWLRDWHQNRQNLKFKDSTSKQTHGQNFKVALLSGPPGVGKTTTVQVVCKELGY
DLVEFNASDTRNKTLLKEAVSGLLSNTTMKDYVTGTKQKITSKHVLLMDEVDGMAGNEDR
GGLQELVNLIKHTDVPVICICNDRFNTKVKTISTHSYDLKYPRLRVEQIRSSMKSLCFKE
NIKISTEDLDHLIESTNYDIRQVINHLEFLGTQMTHVKTTDKKHSNKNFKLGPFDVTKIA
FNADEQKNMSLNEKIGLYFHDYNIAPLFIQENYQGVRLSQISLRQRLERIANAADSISQG
DLIEKVMRSNMMWSLLPLHACFSFVIPANEMSGSSDGLIRFPSWFGRNSKTTRFNRLLQE
LTTHTRLATSANKDALNMDYLPYIRNAIVKPLIDNGVDGIEEAINIMGKYHLTREDLDSA
IEISFWPGMSDSTSNLDSKIKAAFTRAYQKNPPMLPYAINSTTTTKKRSRQNNDIIGEEE
DEEEEIDDIDFDKMIKAKKSTVASTSKAALSTKKRGESIKKCGKVRGKGK
NT seq
3033 nt
NT seq
+upstream
nt +downstream
nt
atgccgagggatattagatcctactttgccccggtcgcgacttcacagaagaacagcgag
cctgtcgctttgaaaaaatctcagaagcgacggatcatttcgtcttcggacgaagacgaa
gagaaaccacagtcgtccacaaaacgttccacagttgtaaaaagaaagaaatcttccatc
ctatctgactctgaggatgaggaaagggtcattagagatgatgaaaaagattccagcaat
cttacaacaaataagaaaagcaaaagcaaagagccttgcaaagcagtacctcttactgaa
ttatttggcaagaagccgataatgagagtagaagagacaaaagtgaaccaaaaattacag
aaagtggaatccaagtttcatgatgatgaagattttgatgctgtgcttaaacaattggat
gtacaagataccctgatacaggataagaagagtaaaagcaaaaatgtggataatcctaag
aaatcagaagctgcagttaagacagaggtggcctctaataaaaacaggaaacataataat
ggtttgaaagagtgcgataatataactaacaatacgagtgaactaagatctgaaaaagta
aaacaatctcctaataaaaataatgtatattcaaaagttacaaattcttctccaaaacag
aacttacaaaaagagaaaaaaagtagctcgaatggagatttagatataagcaaaaaagac
aaagatacagaaaagtcaagtagaaagaaagccaaaataatggaagaaaatttatttgaa
gaaaggaaagaaatgaaaaaacagcgtactataatgtatgaaaaatatcttcagagaggc
ggtgccagaaaccctggttcaaaagagatccctacaggtgccgaaaattgtttagctgga
gtaagtttttgtattactggtgtgttggattccttagaaagaaatgaagccgaagattta
atacaaaaatatggtggccggattgtaaaatctgtatcaaacaaagtaaattatattatg
gtaggagatgaggctggcccatctaaattggcaaaagctagtaatttaggtattaaacaa
atatctgaagatgatctccttgaaatgattcgcacgagaccggaaggtaaagctgcagac
atcaagccgactaaagcaaaatcaaacgtgaaaaagatatttagaaaatttgagagcgat
gaattatcatcaccgaacaaaacaaaagcattattagattcacctaaaaagataaaaata
ccaccatctttatcagtaaaaaccagtgtgaatacggaaactttgccaacatcaaaacaa
gatttagatgcaagcaataatacacagaaaataataacaagtattagatcagaaccatta
gttgagagatatagacccaaaactatgaagcaaattataggtcaacaaggagataagagc
tgtgcacataacttatacatatggctacgtgattggcatcaaaatcgtcagaatctcaaa
ttcaaagacagcactagcaagcaaactcatggacaaaacttcaaagttgccttgttgtct
ggtccaccgggcgttggtaaaacaacaactgtgcaagttgtttgtaaagaattgggatac
gatcttgtggaattcaatgcttccgacacgagaaacaaaacacttctaaaagaagcggtc
tcaggattattatccaatactacgatgaaagattatgtcacaggtaccaaacaaaaaatt
acgagcaagcacgtgctgttgatggatgaagtcgacggtatggctggcaacgaagatcgt
ggtggcttacaggaattagttaatttaataaaacataccgatgtaccagttatctgtata
tgtaatgatcgatttaatacgaaagtgaaaactatttctacgcacagctatgacctaaaa
tatccgaggctcagagtggaacagatcaggagttctatgaagtctctgtgctttaaagag
aacatcaagatttcaacggaggatctcgatcatttaatcgaatcgacgaattatgatatt
cgacaagtaataaaccatctggagtttctcggtactcaaatgactcacgtgaagacaact
gataaaaaacattcaaataagaactttaagctcggtccattcgacgttacaaaaatagca
ttcaatgcggatgagcaaaaaaatatgagtctgaatgagaagatcggtttatattttcat
gattacaatatagcgcctctttttatacaagaaaattatcagggagttagattatctcaa
atatcacttcgtcagaggttagaaagaattgccaatgcagctgatagtatatctcagggg
gacctcatcgagaaggtgatgagaagtaatatgatgtggagtctacttccgttgcatgct
tgtttctcatttgttataccagctaatgaaatgtcaggaagctctgacggattgatacga
ttcccgagctggttcgggcgaaattccaagacaacaagatttaaccgattattgcaagaa
ttgacgacgcatactcgattagctacgagtgcaaacaaggatgccctgaatatggattat
ttaccttatattcgaaatgctattgtaaaacctttgatagataatggtgtagatggtata
gaagaagcaataaatattatgggaaagtatcatttaactagggaagacttggattcagca
atagaaatttctttttggccaggaatgtccgattcgacgagtaatcttgatagtaaaata
aaagcagcgtttacacgcgcatatcaaaagaatcctcctatgctgccatatgcaattaat
agcactactacaacaaagaaaagatctaggcaaaataatgatattataggagaagaagaa
gatgaggaggaagaaattgacgatattgattttgataagatgattaaggcaaaaaaatct
actgttgctagtactagcaaagctgctttatcaacgaaaaaacgcggcgaatcgattaag
aaatgtggaaaagtacgcggtaaaggaaaataa
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