Atta cephalotes (leaf cutting ant): 105625808
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Entry
105625808 CDS
T04923
Name
(RefSeq) DNA-directed RNA polymerase III subunit RPC1
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
acep
Atta cephalotes (leaf cutting ant)
Pathway
acep03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
acep00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
105625808
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
acep03021
]
105625808
Enzymes [BR:
acep01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
105625808
Transcription machinery [BR:
acep03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
105625808
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
FAM198
AcetDehyd-dimer
Zn_ribbon_10
Motif
Other DBs
NCBI-GeneID:
105625808
NCBI-ProteinID:
XP_012062512
UniProt:
A0A158NYA4
LinkDB
All DBs
Position
Unknown
AA seq
1399 aa
AA seq
DB search
MVKEQFRETNVASEVSHISFGVNSMLDINMQASVEMISKNLYNEDTKHTPALQGALDRRM
GVSSTGVECETCNKKLNDCVGHFGYLNLELPVFHVGYFKSIIQILQTICKSCAHVLLTHE
ERKFFSRSIQNPKSGYLMRKALRKKILEVARKKMVCPNCKSNNGPVKKAGFLKIVHEKYK
NLKKTDPIIQEKLAELAPKMERDIEFKNIVEQNYRCIFDKYLYPNVVQELFNRIPTGDIF
FLLMNPECAAPVDLVLRRIPVPPICIRPSILSDLKAGTNEDYLTMKLSEIALINDVIRRQ
KGVNINTYMEHWDFLQLHCGLYINSEMSGIPLHMQPKKSGRGIVQRLKGKQGRFRGNLSG
KRVDFTSRTVISPDPNLRIEQVGVPIHVAKTLTYPERVIPSNMELMRKLVRNGPDTHPGA
NYIQYKNSQNRRYLGYGDRNKAAQDLQYGDIVERHLKDDDLVLFNRQPSLHKLSIMTHRT
KVLEHRTFRFNECVCAPYNADFDGDEMNLHLPQTEEARAEALVLLANKSNLVTPRNGDLL
IAATQDFITGAYLLTQKDTFLQLEQVRLALCLLAGSDASMKVTLPPPAIIKPARLWTGKQ
IFSLIIRPNKECPVKANLKAKGKTYTNGKEFCINDSYIIIRNSELLAGTMDKSVLGSGSK
QNIFYILLRDWGEDIATAAMWRLTRITNHFNFERGISLGIGDLIPSQGLLRAKEKILNTH
YSTCNEYIQLMEQGHLVCQPGCSEEETLETRILNELSVIRDDVGKACLRELHPTNIPLTM
ALCGSKGSFINISQMIACVGQQAINGCRVPDGFENRALPHVLTRSKKPDAKGFVENSFYS
GLVSKEFYFHAMGGREGLTDTAVKTAETGYMQRRLIKSLEDLCIHYDMTVRNSMRDMIQT
TYGGDGLDPTYMEGKDCPVDYERVYEHVRAKMPYITEEPLDYASVINATKEMLRSEEYEC
LSEEFKDELTSFLKLKVARKIAFYRQNVISNSSVTSQLERFTVSQLVEFIHTCKEKYMRA
KIEPGTAVGALAAQSIGEPGTQMTLKTFHFAGVAAMNITQGVPRIKEIINASPKISTPII
TATLINDTSSEFAEQVKARIEKTTLGDVSEYIEEIYLSDDHFLIIKLDIDRIKMLKLEVD
VNSVCYKLCTSKLKLTSKNVEKVTDSVIIIRPNRSKDKDSNFPFRQLTEAIPNVIIKGLP
SINRVVVHNENLGNKSKFTLFVEGDNFREVMATRGILGEKTKSNNTIEVFKTLGIEAART
TIMSEIKSVMENHGISIDCRHLMLLADLMTSRGEVLGITRQGLAKMKESVLNLASFEKTA
DHLFDAAYYGQKDVISGVSESIIMGIPVPLGTGIFKLLHKADKDEPCKKELLFDDPQFHK
PLHSRKRLPRIQPRPLLQI
NT seq
4200 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaagaacagttcagggagacaaatgttgccagcgaagtctcccatatatccttt
ggcgtaaacagcatgcttgacataaatatgcaggccagtgtggagatgatctccaaaaac
ctgtataatgaagatacaaagcatacccctgctttgcaaggagcactggacaggcgcatg
ggagtgagttctacaggagtcgaatgcgaaacgtgtaataaaaagttgaatgactgcgta
ggacatttcgggtatcttaatttagaattaccagtctttcacgttggttacttcaaatct
atcatccagattttacagacaatttgcaagagttgtgctcatgttttgctaacgcacgaa
gaaaggaaatttttttcgcgcagtatacaaaatccgaaatcaggatatttaatgcgcaaa
gcattacgtaagaaaatattagaagtagcgagaaagaagatggtatgtccaaattgtaag
tcaaataatggccctgtgaagaaggctggttttctcaagattgtacatgagaaatacaag
aacttaaagaaaacagatcccattattcaagaaaagttggctgaattggccccaaagatg
gaacgcgacatagaattcaaaaatatagtagagcaaaactacagatgtatatttgataaa
tatctatatccaaatgtggtgcaagaacttttcaatagaattccaacgggtgatatcttc
ttcttgttaatgaatcctgaatgtgcagctccagtagatttagtattgagaaggatccct
gtgccaccaatttgtattagacctagtattttatctgatctaaaggctggtacaaatgaa
gattatctgacaatgaaattgtcagaaatagctcttatcaatgacgtcattcgcaggcaa
aaaggtgttaatataaatacgtacatggaacattgggattttcttcaactgcattgtggt
ctttacattaatagtgaaatgtccggaatacctttacatatgcaacctaaaaagtctggt
agaggtatagtgcaaagattgaaagggaaacaaggtcgtttccgaggtaatttgtctggt
aaacgtgttgattttacttctcgcacagtcatttcgcctgatccgaatctcagaatagaa
caagttggtgtacctatacatgttgcaaagactttaacgtatcctgaaagagttattcca
tcaaacatggaattaatgcgaaaattagtaagaaatggtccagacacacatcctggagca
aactacatacaatataagaattcgcaaaataggcgatatcttggatatggtgatcggaat
aaagccgcccaagatttacagtatggcgacattgttgagaggcatctcaaagacgatgac
ttagtgctgttcaatcggcaaccatctttgcacaaattaagtattatgacacatagaacc
aaggtattagagcatcgaacgttcagattcaacgaatgtgtctgtgcaccttacaatgca
gattttgacggcgacgagatgaatcttcacttaccgcaaactgaagaagccagagccgaa
gcattagttttgttagcgaataaatctaatctagttacacctcgcaatggtgacttattg
atagcagcaactcaagattttatcaccggtgcttatctcttaactcaaaaggatacattt
ctccagctagaacaagttagattagctctttgccttttagctggctcggatgcttctatg
aaagtaactcttcctccgcctgcaatcataaaaccggcgagattgtggaccggcaaacaa
atatttagtctcattatacgaccgaataaggaatgtcctgtcaaagcaaatctaaaggca
aagggcaagacatataccaatggaaaagaattttgtatcaatgactcttatattattatt
cgtaattccgagcttctagcaggaacaatggataaatctgtattaggctcaggatcaaaa
caaaatatattttacattttgctgcgtgattggggtgaagatattgcaaccgcagctatg
tggcgtttaaccagaataacgaatcatttcaattttgaaagaggaatttctcttggtatc
ggtgatctcatacctagtcaaggccttcttcgagccaaggaaaaaatattaaacactcat
tattctacgtgtaatgaatacattcagttaatggaacagggtcatcttgtctgtcaacct
ggatgttcagaagaggaaacactggaaacgagaatattaaacgaactttcagtgatccgt
gatgacgttggtaaagcgtgtttgagagaactgcatcctactaacattcccctaactatg
gcactctgtggaagtaagggtagtttcatcaacatctctcaaatgattgcttgcgtaggt
caacaagctatcaatggatgtagagtaccagatggatttgagaatcgtgcgttacctcat
gtcttgacacgctcaaagaagccagatgctaaaggatttgtggaaaattcattttattct
ggattagtgtccaaggaattctattttcatgcgatgggcggtcgagagggtctcacagat
actgctgtaaaaactgcggagactggatacatgcagagacgattaattaaaagtttagaa
gatttgtgtatccattacgacatgacagtacgcaattctatgcgcgatatgatacagact
acatatggcggtgatggattggatcctacatacatggagggtaaagactgtcccgtggat
tatgaaagagtgtacgagcacgtgagggcgaaaatgccttatattaccgaagagccttta
gattacgctagcgtaattaatgccacaaaggaaatgctacgctctgaggagtatgagtgc
ctgagtgaggaattcaaagatgaattgacttcgtttctgaaattgaaagtggcgcgaaaa
atagcgttttatcggcagaacgttatatcgaattcatcggtgacttcgcaacttgaacgt
tttaccgtctcacaattagtagaatttattcacacgtgcaaagagaagtacatgagagct
aagatagaaccaggcactgctgtaggtgcgctcgccgctcaaagtatcggtgagccaggg
actcagatgacactcaaaacattccattttgctggtgtagctgctatgaacattactcaa
ggagttccccgtattaaagaaattattaatgcgagtcccaagatcagtactcctatcata
acagcgacattgatcaatgatacgagttccgagtttgccgagcaagtgaaggcaagaatt
gagaagacgaccctgggagatgtatctgaatatatcgaggaaatatatttatctgatgat
catttccttataataaaattagatatcgatagaattaaaatgttgaaattagaagttgat
gttaattctgtatgctataaactctgcacttcaaaattaaaattaacttcaaagaatgta
gaaaaggtgaccgactcagttattattattcgaccaaatcgaagtaaagataaagattca
aattttccatttcgtcaattgacagaggccattccaaatgttataataaagggtttacca
tcgatcaatagagtagttgtacataatgaaaaccttggtaataaatcgaaatttacatta
tttgtcgaaggtgataattttagagaagttatggcaacacgtggcatcctcggtgagaag
acaaagtcgaataatacaatagaagttttcaaaacactcggaatagaagcagcgagaaca
actatcatgtcagaaattaagtcggtaatggaaaatcacggtatcagtattgattgtcga
catttaatgctcttggcagatttaatgactagtagaggagaagtacttggtatcacgaga
caaggtttggcaaaaatgaaagaatcggttttaaacttggcatcgtttgagaagactgca
gatcatctatttgatgcagcttattatggacaaaaagatgttataagcggcgtatcggaa
tcaattataatgggtattccagttccactaggcacaggaatattcaagctgcttcacaag
gcagacaaagatgaaccatgcaaaaaggaacttttatttgatgatccacaatttcacaaa
ccattgcattctagaaaacgacttccacgaatacaaccgcgtccattattgcaaatctaa
DBGET
integrated database retrieval system
