KEGG   Atta cephalotes (leaf cutting ant): 105626055
Entry
105626055         CDS       T04923                                 
Name
(RefSeq) exosome complex component RRP41
  KO
K11600  exosome complex component RRP41
Organism
acep  Atta cephalotes (leaf cutting ant)
Pathway
acep03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:acep00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    105626055
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:acep03019]
    105626055
Messenger RNA biogenesis [BR:acep03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     105626055
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Cofactors
     105626055
SSDB
Motif
Pfam: RNase_PH
Other DBs
NCBI-GeneID: 105626055
NCBI-ProteinID: XP_012062758
UniProt: A0A158NZ00
LinkDB
Position
Unknown
AA seq 272 aa
MEPDQENDQGGLRVDGRRALELRQIRMRMGVFGQADGSAYIEHGNTKVLAAVYGPRQSRS
SASRNSTKAIINCQYSMAVFSFTSGERKRRPRGDWKSQERSAQLRHAMEAIIHLELYPRS
QIDVFVEVLQVDGSDYCASVNAATLALIDAGIPIKNYAIGCSITLVNKPSVEDEDKMLTT
GVLDANYVEECSPGVTLSVVALAGTNNDIEVDENGLIVVAHGAGQRLHLSRLETLKQRVL
QGCQDIKNILDHGVRHHLTANLLPSFLHNSLD
NT seq 819 nt   +upstreamnt  +downstreamnt
atggagccagatcaagagaatgatcaaggtggacttcgcgttgacggcagacgagcgttg
gaattaagacaaatccgtatgcggatgggagtattcgggcaggccgatggtagtgcatat
atagaacatggcaacacgaaagttctagcagcggtatacggtcctcgtcagtcaagaagc
agtgcatcaaggaacagtacaaaggctatcataaattgccagtacagcatggctgtgttt
agttttacctctggcgaacggaagcgaagacccagaggagattggaaatcacaagagagg
tcggcacaattacgtcatgccatggaggctataatacacttagaactatatccacgctct
cagatcgatgtcttcgtagaagttctacaggttgacggcagtgattattgtgcatccgta
aatgctgcgacgcttgcattgattgatgccggaattccaatcaagaattatgccatcggc
tgtagcataactcttgttaataagccatcggtagaagatgaagataaaatgttaaccaca
ggagtattggatgcgaactatgtagaggagtgttcaccaggagttactttgtctgttgtt
gcattagcaggaacgaataatgatattgaagtggatgagaatggtttgatagtagtagca
catggggcaggtcagagattacatttgtcacgtttggaaacactcaaacaacgtgtgtta
caaggttgccaagatataaagaatatattggaccatggcgtgaggcatcatttaactgca
aatctgttgccttcatttctgcataattcactcgactaa

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