Atta cephalotes (leaf cutting ant): 105626062
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Entry
105626062 CDS
T04923
Name
(RefSeq) LOW QUALITY PROTEIN: transcription elongation factor SPT5-like
KO
K15172
transcription elongation factor SPT5
Organism
acep
Atta cephalotes (leaf cutting ant)
Pathway
acep03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
acep00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
105626062
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
acep03021
]
105626062
03019 Messenger RNA biogenesis [BR:
acep03019
]
105626062
Transcription machinery [BR:
acep03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
105626062
RNA polymerase I system
105626062
Messenger RNA biogenesis [BR:
acep03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
105626062
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KOW4_SPT5
KOW
KOW6_SPT5
KOW7_SPT5
Spt5-NGN
KOW2_Spt5
KOW5_SPT5
KOWx_SPT5
Spt5_N
KOW1_SPT5
CTD
GPKOW_C
SH3_KIN17_C
CDC45
Motif
Other DBs
NCBI-GeneID:
105626062
NCBI-ProteinID:
XP_012062766
UniProt:
A0A158NZ08
LinkDB
All DBs
Position
Unknown
AA seq
1029 aa
AA seq
DB search
EEEEEEEEEEEEEEEEEEEDDDDDNEEDNDDKPKKKKKSRVASFIIDEAEVDDDVEDDDE
WEEGAHEIGIVGNEVDELGPTAREIERRRRDTNLWNSQEEEIEEYLRKRYSNKSIAVHRF
GDGSKEMSEEIIQQTLLPGVKDPNLWMVKCRIGEEKATVLLLMRKFIAHQNSNEPFQIKS
VVAPEGVKGYIYIEAYKQSHIKAVIENVGSLRMGTWKQQMVPIKEMTEVLRVVKEQTRLK
PKQWVRVKRGIYKEDLAQIDYIDLAQNQVHLKLLPRIDYSRFRGALRTVQNESDILKRKK
NKQPAKPFNPEAVRAIGGEVTKNGDFHIFEGNRYSHKGFLYKNFSINNIMAEGVKPTLSE
LEKFEEAPQDVEIDSIDTPKSGTFEKKNQFHSFSNGDNVIVCEGELINLQGKIISIDGNT
IMIMPKHEELNEALELQASELRKYFAQGDHVKITAGRYEGDTGLIVRVEQNRVVLFSDLT
MHELEVLSRDLQLCSDTATGVDSLGQFQWGDLVQLDAQTVGVIVRLERENFHVLSIHGKV
IEVRPQVVTKRRESRNTIALDSQQNTIQKKDIVKVVDGPHAGREGEIKHLYRNFAFLHSR
IFIDNGGIFVCKTRHLQLSGGNKTTPISIPPLLGFMSPKITSPMHPSGGSFGQNNGSGRG
KGRSVDGIRRDRELIGITVKIIGGPYKGNVGIVKDATQTTARVELHSTCHTISVDRSHIA
TVGVQIRDSGFSNYNKTIYGLGGQTPTYSKDTSKTPTHGFQTPMYEHGSRTPHYAGSMTP
SHDGSRTPGQSGAWDPTVTNTPARTHDFDEYNMEEGSSPGYPSEYVPAEGPFIPQIPGIM
YGSEQTYGSCHSSPIESSTVNSDHESYSATSSMNIGYINSSFSTPSPGDYTPTXFIILAG
SPYSPLTLHLGMDADDDSNWHTTDIEVRIRDTHDDPALVGQQGVIRQVSGGMCTVYLPTE
DRAVSIVCGQLEFVVPSRGDRVKVILGEDREAVGTLLSIDNQEGVVKLTTDEIKFFQFRF
LGKMEDIKG
NT seq
3090 nt
NT seq
+upstream
nt +downstream
nt
gaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagat
gatgatgatgataatgaagaagataatgatgataagccgaaaaagaaaaagaaaagtaga
gttgctagcttcatcatagatgaagctgaagtagatgatgatgtggaagatgacgatgaa
tgggaggaaggtgcgcatgaaattggtatcgtgggaaatgaagtggacgaattagggccg
actgcgcgtgagattgagagacgacgtagagatacaaatctttggaattcacaagaagag
gaaattgaggagtatcttcggaaaagatatagcaacaaatcgatagccgttcatcgtttt
ggcgacggcagcaaagaaatgagcgaggaaatcatccaacaaactttattaccaggcgtg
aaagatccaaatttatggatggtaaaatgtcgaataggagaagaaaaagccacagtgctg
ttattgatgcgcaagttcatcgcgcatcagaattcaaatgaaccttttcaaataaaatct
gttgtggcaccggaaggagttaagggatatatatacatagaggcttataagcaatcgcat
ataaaagctgttattgaaaatgttggaagtctcagaatgggtacatggaaacaacaaatg
gtgccaattaaagagatgacagaagtgctgcgagtagttaaagaacaaacccgtttaaaa
cctaaacaatgggtccgtgtgaaacgaggcatttacaaagaggatttagctcagattgat
tatatcgatttagcacaaaatcaagttcacttaaaattgcttccgagaatcgattattct
agatttcgtggcgcgttgagaacagtacagaatgaatccgatatattgaaacgtaagaag
aacaagcaaccagcaaaaccatttaatcctgaagcagttcgtgctattggaggagaagtt
actaaaaacggagatttccatatttttgaaggaaatagatatagtcataaagggtttctt
tacaaaaatttttccataaataacattatggcggagggtgttaaaccaacactttccgaa
ttagaaaaatttgaagaagcgccgcaagatgttgaaatagattccattgatacaccaaaa
agtggaacatttgaaaaaaaaaatcaatttcattccttcagtaatggagataatgtaata
gtatgcgagggtgaacttataaatctacagggaaaaatcatttccatagatgggaacaca
attatgattatgcctaaacatgaagaacttaacgaagctttggaattacaagcttcagaa
ttacgaaaatattttgcacaaggcgaccacgtgaagattacggcaggacgatatgaaggc
gacacaggtttaattgttagagtagaacaaaacagagtagttttattctcagatttgaca
atgcacgaactcgaggttttatcgagggatctacaattgtgttctgacacggcaactggt
gttgacagcttaggtcaattccaatggggtgatttggtgcaactagatgcacaaacagtt
ggtgttattgttcgattggaacgtgagaatttccatgtcttgtctatacatgggaaagta
atcgaagtaagaccgcaagttgttacgaaacgtcgcgaaagcagaaatacaatcgcattg
gactctcaacagaacactatacaaaaaaaggatattgttaaagtagttgacggaccgcat
gccggtcgagaaggtgaaattaaacacctttacagaaattttgcttttttgcattcaaga
atattcatcgacaacggtggaatatttgtatgcaaaaccagacatttacaactatccggt
ggaaataaaacaactcctatctctataccaccattgttaggatttatgtcacctaaaatt
acctctccgatgcatcccagcggaggtagttttggacaaaataacggaagtggacgaggt
aaaggtcgtagcgttgatggtataagacgtgatcgagaattaataggaatcaccgtcaaa
ataataggtggaccttataaaggaaacgtgggtattgtaaaagatgcgacgcagacaaca
gcacgagtggaactgcattcgacgtgccataccatctcggttgatcgttctcatatagca
accgttggtgttcaaataagagatagtggcttcagcaactacaacaaaacgatttatgga
ctcggtggacagacgccgacgtattcgaaggacacatcaaaaacacctacgcatggtttc
cagacgcctatgtacgaacatggttctcgtactccacattacgccggttcgatgacacca
tctcacgatggctcacgaacaccaggtcaatccggagcctgggatccgacagttactaat
acacctgctaggacgcatgattttgatgaatataacatggaggagggtagctcacctggt
tatccttccgaatatgttcctgctgaagggccgtttattccacagattccgggcattatg
tacggctcggaacaaacctacggttcatgtcattcgagtcctatagaaagttctactgtg
aactcagatcatgaaagctacagtgctacttcgtcaatgaatattggatacatcaacagt
tcattttcgacgccttctccaggagattacacacctacataatttatcattcttgcaggt
agtccatatagtccactaacacttcacttaggaatggatgcagatgatgattcaaattgg
catacaacggatattgaagttcgcattcgcgatacccatgatgatcctgccctcgttgga
caacaaggagtcatccgacaagtttcaggtggcatgtgcaccgtttatttacctacggaa
gatcgagcagtgagcatagtgtgtggacaattagaatttgtagtaccatcacgtggcgat
cgagttaaagtgattcttggtgaagaccgtgaagccgtcggcactttactttcgatcgac
aatcaagagggagtggtaaagctcactacggacgaaataaaattcttccaatttcggttt
ttgggtaaaatggaagacataaaaggatag
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