Atta cephalotes (leaf cutting ant): 105627092
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Entry
105627092 CDS
T04923
Name
(RefSeq) superkiller viralicidic activity 2-like 2 isoform X1
KO
K12598
ATP-dependent RNA helicase DOB1 [EC:
5.6.2.6
]
Organism
acep
Atta cephalotes (leaf cutting ant)
Pathway
acep03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
acep00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
105627092
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acep03019
]
105627092
03041 Spliceosome [BR:
acep03041
]
105627092
03009 Ribosome biogenesis [BR:
acep03009
]
105627092
03016 Transfer RNA biogenesis [BR:
acep03016
]
105627092
Enzymes [BR:
acep01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
105627092
Messenger RNA biogenesis [BR:
acep03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
105627092
Spliceosome [BR:
acep03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
105627092
Complex C
U4/U6.U5 tri-SnRNP related factors
105627092
Ribosome biogenesis [BR:
acep03009
]
Eukaryotic type
Pre-60S particles
Helicases
105627092
Transfer RNA biogenesis [BR:
acep03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
105627092
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MTR4_beta-barrel
DSHCT
DEAD
MTR4-like_stalk
DEXQc_Suv3
ResIII
Helicase_C
NPHP3_N
nSTAND3
ATPase_2
Death_3
Motif
Other DBs
NCBI-GeneID:
105627092
NCBI-ProteinID:
XP_012063762
UniProt:
A0A158P1V4
LinkDB
All DBs
Position
Unknown
AA seq
1016 aa
AA seq
DB search
MANFSEDLFDVFDEHGDEVEILDIPKYVKRFLSKIKPEIGVKRHSDVDDDKATIKKLRHD
SVLNDINLEEVACRITVHTIETVESCMHEIAIPPDQEYVPLEHQQGKPAKEYKFILDPFQ
KEAILCIENNQSVLVSAHTSAGKTVVAEYAIACSLKDKQRVIYTTPIKALSNQKYREFYE
EFKDVGLVTGDVTINPTASLLIMTTEILRNMLYRGSEVMREVGWVIFDEIHYMRDKERGV
VWEETLILLPDNVHYVFLSATIPNARQFAEWVAHLHRQPCHVVSTDYRPTPLQHYIFPVG
GDGIHLVVDEMGQFKEENFNRAMACLQNMGDAAKGDTKGRKGGLRATNSGQTNIFKMVKM
IMERNFAPVIIFSFSKKDCEVYAMQMAKLDLNTLEEKKLVDEVFNNAVDVLNDEDKKLPQ
VTNLLPLLRRGIGIHHSGLLPILKETVEILFGEGLIKALFATETFAMGLNMPARTVLFTA
PRKYDGKDFRWITSGEYIQMSGRAGRRGLDDKGIVILMIDEQVSPVVGKAIVQGKPDPIN
SAFHLTYNMVLNLLRVEEINPEYMLERSFFQFQNQAGIPVLYNKVKELSIAYNTVNVDRY
DEISSYHDIREQLNRLSGEFQSFLTQPEYLVPFLQPGRLVKVKNEIETFDWGIIVNFKKK
NPKNPVKGKTVIVIDILLHLSKNSKEGSPIPCREDEEGEIEVVPVLHNLISQISSLRLYY
PKDLRPPDNRKSVLKTIREVKKRFPDGPPLLNPITDMHIEDQAFKDIVKKIEALEKRLYA
HSLHKDPNINVLYEQFLHKEELAAQLKQAKEEFKQAKSILQMDELKCRKRVLRRMAYCTS
ADVIELKGRVACELNGADELLMTEMIFNGLFNALSVPQMVALISCFVCDEKSNEMPKSTE
ELSGPLRQMQDLARRIAKVSTEANLELDEDAYVDRFKPYLMDVIYAWCKGATFLQICKMT
DIFEGSIIRCMRRLEEVLRQLCQAAKGIGNTDLENKFSEAIKLIKRDIVFAASLYL
NT seq
3051 nt
NT seq
+upstream
nt +downstream
nt
atggcaaattttagtgaagatttgtttgatgtttttgatgagcatggcgatgaagtagaa
atactagacattccaaagtatgtgaaacgatttttgtcgaaaatcaagccggagatagga
gtaaagcgacactctgacgtcgatgatgacaaagcaaccataaaaaaattgcgacacgat
tctgttttaaatgatatcaatctagaggaagtggcatgtcgtataacagtgcatactata
gaaactgtagaatcttgtatgcatgagattgctattcctcctgatcaagagtatgtacct
ttggagcatcaacaaggcaagccagccaaagagtataaattcatactggatccatttcaa
aaggaagcaattttatgcattgaaaacaatcagtcagttcttgtctctgcacatacgtcg
gctggtaaaactgtcgtggctgaatatgcaatagcatgttcgcttaaggataaacagaga
gtaatatatactactccaattaaagcgttgagtaatcaaaaatatagagaattttatgag
gaatttaaagatgttggtttagtaacaggcgatgttactataaatccgacagcaagttta
ttaattatgactactgaaattttgcgaaatatgctctataggggttcagaggtaatgcgt
gaagttggttgggtaattttcgatgagattcattatatgcgtgacaaagagagaggcgta
gtttgggaagagacacttatattgctgccagacaatgtgcactatgtatttctttctgct
actataccaaacgcacgacaattcgcagaatgggtagcacatttgcatcgtcaaccttgc
catgtagtctctacggattatagacctactccgttgcaacattatatatttccagttggc
ggcgatggtatacatctggttgtagatgaaatgggtcaatttaaagaagaaaattttaac
agagccatggcgtgtctgcaaaatatgggtgatgcagctaaaggtgatacaaaaggacgc
aaaggtggtctacgcgctacgaacagcggacaaacaaatattttcaagatggtaaaaatg
atcatggagagaaacttcgcgcccgtgataatctttagcttttcgaagaaagattgcgaa
gtttacgcaatgcagatggctaaattggatttgaatacattagaagagaaaaaattagta
gatgaggtttttaacaatgcggtagatgttctcaacgatgaggacaaaaagttaccgcaa
gttacaaatttgctgccacttttgcggcgtggaataggaatccatcacagtggactcttg
ccaattttgaaggagactgtcgagatattatttggcgaaggtttaattaaagcccttttt
gctactgaaacattcgcgatgggtttgaatatgccggcacggacagtcttgtttacggca
cctcgtaaatacgatggcaaagactttcgttggatcacatcaggtgaatacatccagatg
tccggtcgcgctggcaggagaggtctcgacgacaaagggattgtcatattgatgatagac
gagcaagttagtcccgttgttggtaaagctatcgtccaaggaaaaccggatccaatcaat
tctgcatttcatttgacttataatatggttcttaatcttctacgagtggaagaaattaat
ccagaatacatgttggaaagaagttttttccaatttcagaatcaagctggtattccagtt
ttatataacaaggtaaaggaattaagtatcgcttacaatactgtgaacgtggataggtac
gacgagatttcttcgtatcatgacatacgtgaacaactcaatcgactgagtggagagttt
caatcatttttaacgcaaccggaatatttagttccgtttttacaacctggaagattagta
aaagtaaaaaatgaaattgaaacgttcgattggggaatcatagtgaattttaagaaaaaa
aatccgaaaaatccagtaaaaggcaagactgttattgtcattgatattttgcttcattta
tcaaaaaattctaaagaaggcagtccaattccatgtcgcgaagatgaagagggtgaaata
gaagtagttcctgttttgcataatttaatttcacaaatcagttcattaagattatattat
ccaaaagatcttagaccgcctgataatagaaagagtgtactgaagacaatacgagaagtg
aaaaaaagattcccggacggtccaccgttacttaatcctattacagatatgcatatagag
gatcaggcttttaaagacattgtaaaaaaaattgaagcgttagaaaaaagattatatgca
cattctttgcataaggatcctaacataaatgtactatatgaacaatttttacacaaagaa
gaattggctgcgcaacttaaacaagccaaggaagaatttaagcaagctaagtcgatactt
caaatggacgaactcaaatgtagaaagagagttctaaggagaatggcttattgcacatcg
gcagacgttatagaattgaaaggacgtgtagcttgtgaactgaacggtgccgatgaacta
ttaatgaccgagatgatttttaatggtctttttaacgctttgagtgtgccacagatggtg
gcattgatcagctgctttgtatgcgacgaaaaatcaaacgaaatgcctaaaagtacagag
gaattaagcggtccacttaggcagatgcaggacttggctcgaagaatagcaaaggtatca
acagaagccaatctggaattagacgaggatgcatatgtcgacagatttaaaccatattta
atggatgttatctacgcttggtgtaaaggcgcaacatttttacaaatttgcaaaatgaca
gatatatttgaaggatctattatcaggtgtatgcgacgtttagaggaggtgcttcgacaa
ttgtgtcaagctgcaaaaggtattgggaatacagatctagaaaataaatttagcgaggcg
atcaaacttataaaacgggatattgtgtttgctgcgtctttatatttataa
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