Atta cephalotes (leaf cutting ant): 105627110
Help
Entry
105627110 CDS
T04923
Name
(RefSeq) CCR4-NOT transcription complex subunit 3
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
acep
Atta cephalotes (leaf cutting ant)
Pathway
acep03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
acep00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
105627110
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acep03019
]
105627110
Messenger RNA biogenesis [BR:
acep03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
105627110
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
105627110
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
V-SNARE
FlgM
Motif
Other DBs
NCBI-GeneID:
105627110
NCBI-ProteinID:
XP_012063782
UniProt:
A0A158P1X4
LinkDB
All DBs
Position
Unknown
AA seq
687 aa
AA seq
DB search
MAATRKLQGEIDRCLKKVTEGVETFEDIWQKVHNATNSNQKEKYEADLKKEIKKLQRLRD
QIKSWIASGEIKDKSTLLDYRKLIETQMERFKVVERETKTKAYSKEGLGAAQKLDPAQKE
KDEVTNWLANSIDALNLQMDTFESEIESLQAGKKKRIDKDKQDRVDELKAKLDKHRYHIR
KLETLLRMLDNMSVEVNTIKRIKDDVEYYIESSQDPDFEENEYIYDDIIGLDEVELSGVG
IPSSATTDSNNSNETGGTPTSTNSCTSPIPSPSLSSTMHNHSSDSSTDNDKKTKPVKPTA
VRPLLNTQASIPTTGSTATIKSNMLSSSTPSKTIPMTPSHSSPSSTSNHIATTNAGNFAT
VAASHSNSQAIHSTSNKTSTHNSENNILSSSSTSSVTSNVPQTIAQQHNNNPAPAQTTHV
LHSQQSQNHNSETEMTTPIPPSSSPQSSVSSRSSPMPANSCSPAPSTANGLIPKLPDGSM
SSLKSIAQQVIVRAGLEIPPSEPNRNIFDSAKTSNSSNNNATSEAHIPPLLGVAPLGPVP
LQKEHQLQFQMMEAAYYHMPHPSDSERLRSYLPRNTCTTPPYYQQVQLPHSDTVEFFQRL
STETLFFIFYYMEGSKGQYLAAKALKKQSWRFHTKYMMWFQRHEEPKIINEEYEQGTYIY
FDYEKWGQRKKEGFTFEYKYLEDRDLN
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgacaagaaagttgcaaggtgaaatagatcggtgccttaaaaaagtaacggaa
ggtgtggaaacctttgaagatatttggcaaaaagttcataatgccacgaacagcaatcag
aaagaaaagtacgaggctgatctcaaaaaggaaatcaagaaacttcaaaggttacgcgat
caaattaagagctggatcgcgtcgggtgaaataaaggataagagtacgcttctggactat
cggaagttgattgagactcaaatggaaagatttaaagttgtagaaagagagacaaaaaca
aaagcttattctaaagaaggtttaggcgctgctcagaaattggacccagctcagaaggag
aaagatgaggttactaattggcttgccaattccatagacgctctcaatctgcagatggat
acatttgaatcggaaatagaatcgttacaagcgggaaagaagaaaaggatagacaaagat
aaacaagatagggtggatgaattgaaggcaaagctcgacaaacaccgctaccatatccgt
aaattggagacattattacgtatgcttgataatatgtctgtcgaagtcaatacaataaag
aggataaaggacgatgttgagtattatatcgaatcttcgcaagatcccgattttgaggaa
aacgaatatatttacgatgatattatcggccttgatgaagttgagttgtcaggagttggc
atcccctcgtcagcaacaacagatagtaacaacagcaatgaaaccggaggaacgccaacc
tcaactaattcctgtacttcgcctataccatcgccgtcgttgagctccactatgcataac
cattcgagcgatagttctacagataatgacaagaaaaccaagcctgtgaaaccaacagca
gtcaggccgctactgaatacgcaagcgagcattccaaccacgggaagcactgccaccata
aaatcgaacatgttatcgagcagcactccaagcaaaaccattcccatgacacctagccat
agctcgcctagttctacgagcaatcacattgccacgactaatgccggcaatttcgccacc
gtagctgcctcgcacagcaattcgcaagccatccattctacctccaataaaacatctact
cacaacagtgagaataatatcttatcatcatcatctacgtccagtgttacgtcgaatgtg
ccgcaaacgattgcgcaacagcacaataataatccggcaccggcacagacgacgcacgta
ctgcacagtcaacagagtcagaatcacaatagtgaaacggaaatgactacaccgataccg
ccatcttcgtcgccgcagtcgtcggtcagcagtagatcctcgccgatgcccgcaaactcc
tgctcgccagcaccgtccactgccaatggtctcatccctaagcttcctgatggaagcatg
tcctctttaaaatccattgcccaacaagtaattgtccgagcaggtctcgagataccacct
tccgagccgaatagaaacatctttgacagtgccaagacgagcaacagtagcaacaacaat
gccacgtcggaagcacacattcctccgctgcttggggtcgcgcccttggggcctgtacca
ttacagaaggagcatcagttgcagttccaaatgatggaagccgcctactatcatatgcca
catccgtctgactcggaaagattacgttcatatttgccgagaaatacatgcaccacgcca
ccttattatcagcaggttcagcttcctcattcggatactgtggagttcttccaacgcctt
tctacggaaactttattcttcatattttattatatggaggggtctaaggggcagtattta
gcagcaaaggctttgaagaaacaaagttggaggtttcacaccaagtatatgatgtggttc
cagaggcacgaggaaccgaaaattattaatgaggaatacgagcagggaacgtacatctat
tttgactacgaaaaatgggggcagaggaaaaaagaaggatttacttttgaatacaagtac
ttagaggacagagatctgaactaa
DBGET
integrated database retrieval system
