Apis cerana (Asiatic honeybee): 107992644
Help
Entry
107992644 CDS
T07475
Name
(RefSeq) ATP-dependent RNA helicase WM6
KO
K12812
ATP-dependent RNA helicase UAP56/SUB2 [EC:
5.6.2.7
]
Organism
acer
Apis cerana (Asiatic honeybee)
Pathway
acer03013
Nucleocytoplasmic transport
acer03015
mRNA surveillance pathway
acer03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
acer00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107992644
09122 Translation
03013 Nucleocytoplasmic transport
107992644
03015 mRNA surveillance pathway
107992644
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acer03019
]
107992644
03041 Spliceosome [BR:
acer03041
]
107992644
Enzymes [BR:
acer01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
107992644
Messenger RNA biogenesis [BR:
acer03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
107992644
Spliceosome [BR:
acer03041
]
Complex C
Other components
EJC/TREX
107992644
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
107992644
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
107992644
NCBI-ProteinID:
XP_016904149
UniProt:
V9IIX6
LinkDB
All DBs
Position
Unknown
AA seq
424 aa
AA seq
DB search
MADNDDLLDYEDEEQTEQLVDGSRDTPAKKEVKGTYVSIHSSGFRDFLLKPEILRAIIDC
GFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLELTENQVYVLVMCHTR
ELAFQISKEYERFSKYMPHVKVGVFFGGLPIQKDEEVLKNTCPHIVVGTPGRILALVRNK
KLNLKHLKHFILDECDKMLELLDMRRDVQEIFRSTPHGKQVMMFSATLSKEIRPVCKKFM
QDPMEVYVDDEAKLTLHGLQQHYVKLKENEKNKKLFELLDVLEFNQVVIFVKSVQRCMAL
AQLLTEQNFPAIGIHRGMTQEERLSRYQQFKDFQKRILVATNLFGRGMDIERVNIVFNYD
MPEDSDTYLHRVARAGRFGTKGLAITLVSDESDAKILNDVQERFDVNITELPDEIDLASY
IEGR
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atggcagataacgatgatcttttggattatgaggatgaagaacagactgaacaattagtt
gatggaagcagggatacgcctgctaaaaaagaagttaaaggcacatatgtatctattcac
agtagtggatttagagattttcttcttaaacctgaaatattacgcgcaattattgattgt
ggttttgagcatccatctgaagttcaacatgaatgtattcctcaagcagttcttggcatg
gatatattatgtcaagcaaaatctggtatgggaaaaactgctgtatttgtgttagcaaca
ttacagcaattagaattaactgaaaaccaagtttatgttcttgtcatgtgccacacacga
gaacttgcttttcaaataagcaaagaatatgaaagatttagtaaatatatgcctcatgta
aaggttggagtattttttggtggtttgccaattcaaaaagatgaagaagtcctgaagaat
acatgtcctcatattgttgttggtactccaggtcgcatccttgctcttgttcgaaataaa
aaattaaatttgaaacatttgaagcactttattctcgacgaatgtgacaaaatgctcgaa
ttattagacatgcgtagggacgtacaggaaatatttagaagcactccacacggcaaacaa
gtcatgatgttcagcgctacattgtccaaggagatacgtcctgtctgcaaaaaattcatg
caagatcccatggaagtctatgtggatgatgaagcgaaactcacgttgcatggtctacaa
caacattatgtgaaacttaaagaaaatgaaaagaataagaagctatttgaattgcttgat
gtacttgaatttaatcaggttgttatctttgtaaaatctgtacaaaggtgcatggccttg
gcacaacttttaacagaacaaaattttcctgcaattggtatacatagaggtatgactcaa
gaagaacggttatcaaggtatcaacaatttaaagatttccaaaaacgaattcttgtagct
acaaatttatttggacgtggtatggatattgagcgcgtaaacatagtatttaattatgat
atgccagaagattcagacacatacttacatcgagtagctagagctggtcgttttggtaca
aagggtcttgccattacactagtaagtgatgaaagtgatgctaagatattaaatgatgtt
caagaacgatttgatgttaacattacagaattaccagatgaaatagatttagcttcatat
attgaaggacgataa
DBGET
integrated database retrieval system