KEGG   Apis cerana (Asiatic honeybee): 107992644
Entry
107992644         CDS       T07475                                 
Name
(RefSeq) ATP-dependent RNA helicase WM6
  KO
K12812  ATP-dependent RNA helicase UAP56/SUB2 [EC:5.6.2.7]
Organism
acer  Apis cerana (Asiatic honeybee)
Pathway
acer03013  Nucleocytoplasmic transport
acer03015  mRNA surveillance pathway
acer03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:acer00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    107992644
  09122 Translation
   03013 Nucleocytoplasmic transport
    107992644
   03015 mRNA surveillance pathway
    107992644
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:acer03019]
    107992644
   03041 Spliceosome [BR:acer03041]
    107992644
Enzymes [BR:acer01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     107992644
Messenger RNA biogenesis [BR:acer03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     107992644
Spliceosome [BR:acer03041]
 Complex C
  Other components
   EJC/TREX
    107992644
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    107992644
SSDB
Motif
Pfam: DEAD Helicase_C ResIII CMS1 Cas3-like_C_2
Other DBs
NCBI-GeneID: 107992644
NCBI-ProteinID: XP_016904149
UniProt: V9IIX6
LinkDB
Position
Unknown
AA seq 424 aa
MADNDDLLDYEDEEQTEQLVDGSRDTPAKKEVKGTYVSIHSSGFRDFLLKPEILRAIIDC
GFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLELTENQVYVLVMCHTR
ELAFQISKEYERFSKYMPHVKVGVFFGGLPIQKDEEVLKNTCPHIVVGTPGRILALVRNK
KLNLKHLKHFILDECDKMLELLDMRRDVQEIFRSTPHGKQVMMFSATLSKEIRPVCKKFM
QDPMEVYVDDEAKLTLHGLQQHYVKLKENEKNKKLFELLDVLEFNQVVIFVKSVQRCMAL
AQLLTEQNFPAIGIHRGMTQEERLSRYQQFKDFQKRILVATNLFGRGMDIERVNIVFNYD
MPEDSDTYLHRVARAGRFGTKGLAITLVSDESDAKILNDVQERFDVNITELPDEIDLASY
IEGR
NT seq 1275 nt   +upstreamnt  +downstreamnt
atggcagataacgatgatcttttggattatgaggatgaagaacagactgaacaattagtt
gatggaagcagggatacgcctgctaaaaaagaagttaaaggcacatatgtatctattcac
agtagtggatttagagattttcttcttaaacctgaaatattacgcgcaattattgattgt
ggttttgagcatccatctgaagttcaacatgaatgtattcctcaagcagttcttggcatg
gatatattatgtcaagcaaaatctggtatgggaaaaactgctgtatttgtgttagcaaca
ttacagcaattagaattaactgaaaaccaagtttatgttcttgtcatgtgccacacacga
gaacttgcttttcaaataagcaaagaatatgaaagatttagtaaatatatgcctcatgta
aaggttggagtattttttggtggtttgccaattcaaaaagatgaagaagtcctgaagaat
acatgtcctcatattgttgttggtactccaggtcgcatccttgctcttgttcgaaataaa
aaattaaatttgaaacatttgaagcactttattctcgacgaatgtgacaaaatgctcgaa
ttattagacatgcgtagggacgtacaggaaatatttagaagcactccacacggcaaacaa
gtcatgatgttcagcgctacattgtccaaggagatacgtcctgtctgcaaaaaattcatg
caagatcccatggaagtctatgtggatgatgaagcgaaactcacgttgcatggtctacaa
caacattatgtgaaacttaaagaaaatgaaaagaataagaagctatttgaattgcttgat
gtacttgaatttaatcaggttgttatctttgtaaaatctgtacaaaggtgcatggccttg
gcacaacttttaacagaacaaaattttcctgcaattggtatacatagaggtatgactcaa
gaagaacggttatcaaggtatcaacaatttaaagatttccaaaaacgaattcttgtagct
acaaatttatttggacgtggtatggatattgagcgcgtaaacatagtatttaattatgat
atgccagaagattcagacacatacttacatcgagtagctagagctggtcgttttggtaca
aagggtcttgccattacactagtaagtgatgaaagtgatgctaagatattaaatgatgtt
caagaacgatttgatgttaacattacagaattaccagatgaaatagatttagcttcatat
attgaaggacgataa

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