Apis cerana (Asiatic honeybee): 107993883
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Entry
107993883 CDS
T07475
Name
(RefSeq) pre-mRNA-splicing factor SYF1 isoform X1
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
acer
Apis cerana (Asiatic honeybee)
Pathway
acer03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
acer00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107993883
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acer03019
]
107993883
03041 Spliceosome [BR:
acer03041
]
107993883
Messenger RNA biogenesis [BR:
acer03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
107993883
Spliceosome [BR:
acer03041
]
Complex B
Other components
Prp19-related factors
107993883
Complex C
107993883
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
HAT_PRP39_N
HAT_PRP39_C
TPR_14
Suf
TPR_2
TPR_8
TPR_12
TPR_15
ARM_TT21_C
DHR-2_Lobe_A
TPR_10
PPR
ARM_TT21
4HB_MCP_1
Microp_apicomplexa_6
Motif
Other DBs
NCBI-GeneID:
107993883
NCBI-ProteinID:
XP_016906038
LinkDB
All DBs
Position
Unknown
AA seq
836 aa
AA seq
DB search
MLERKDPEGNIYVFNEEDLPYEEEILRNPYSVKHWQRYIDHLKSTKSNNLNIVYERALKE
LPGSYKLWYNYLRQRVNQLKGRCITDLLYEDVNNAFERALVFMHKMPRIWMDYCTLMTEQ
CYITRTRQVFDRALRALPITQHHRIWPLYIEFLKKHNVYETAVRVFRRYLKLAPEDTEEY
IEYLKSIGRLDEAAVKLAQIVNQDDFISKHGKSNHQLWNELCDLISKNPSKIKSLNVDAI
IRGGLRRYTDQLGPLWNSLADYYVRSGLFERARDIYEEAIQTVTTVRDFTQVFDAYAQFE
ELSLSKRMEEAAKNPTEDDDIDLELRLARFEHLMERRLLLLNSVLLRQNPHNVQEWHKRV
RLYEGQPHEIINTYTEAVQTVQPQLAVGKLHTLWVEFGKFYEENNQITDARVVFEKATHV
PYTKVDDLASVWCEWAEMEIRHGNYKEALKLMHRATAMPFRKVAYHDETETVQMRLYKSL
KVWSMYADLEESFGTFKTCKAVYDKIIDLKIATPQIIINYGLFLEENKYFEEAFRAYEKG
IALFKWPNVYDIWNTYLTKFLKRYGGTKLERTRDLFEQCLEFCPPKYAKALYLLYAKLEE
EHGLARHAMSVYERATNAVLPEERFEMFNIYIKKAADIYGVPKTRQIYEKAIEVLNEDNT
REMCLRFAEMETKLGEVDRARAIYAHCSQICDPRVASNFWQIWKEFEVRHGNEDTMREML
RIKRSVQAMYNTQVNMMSAQMLNNTSNSLSDVPADAMRLLDSKTQDNITTNKDSIKFVRG
VTEKDGKPESQVNNPDEIDIDINDVNEGDIEEDIPIEKQTIPSQVFSSLKTIDDDD
NT seq
2511 nt
NT seq
+upstream
nt +downstream
nt
atgttagaacgcaaagatccagaaggaaatatatatgtttttaatgaggaagatttacca
tacgaagaagaaattttaagaaatccatattctgtaaaacattggcaacgttatatagat
catttaaaaagtacaaaaagtaataatttaaatatcgtatatgaacgagcattgaaagaa
cttcctggaagttataaattatggtataattatcttcgtcaacgtgtcaatcaattgaaa
ggaagatgcataactgatcttctttatgaagatgtaaataatgcatttgaacgtgcttta
gttttcatgcataaaatgcctagaatttggatggattattgtacattaatgacagaacaa
tgctatattacacgtactcgtcaagtttttgatagagcacttagagctcttcctattaca
cagcatcatcgtatatggccattgtatattgaatttttgaaaaaacacaatgtatatgaa
actgcagtcagagtttttagacgatatctaaagttagctccagaagatacagaagaatat
atagaatacttgaaatcaattggaaggcttgatgaagcagctgtaaaacttgcacaaatt
gttaatcaagatgattttatatcaaaacatggaaagtctaatcatcaattatggaatgaa
ttgtgtgatttaatatcaaagaatccttctaaaataaaatctcttaatgtggatgctatt
attagaggtggattaagacgttatactgatcaattaggtcctttgtggaattctttagca
gattattatgttcgtagtggtttatttgaaagggcaagagatatttatgaagaagcaata
caaacagtaactactgttagagactttactcaagtatttgatgcctatgcacaatttgaa
gaacttagtcttagtaaacgtatggaagaagctgcaaaaaatcctactgaagatgatgat
attgatttggaattgagattagcacggtttgaacatttaatggaaagacgtttattactt
ttgaattctgtattactcagacaaaatcctcataatgtacaagaatggcataaaagagtt
agactttatgaaggacaaccacacgaaatcattaatacatatacagaagctgtacaaact
gtgcaaccacaattagcagtaggtaaattacatactttatgggttgagtttggtaaattt
tatgaagaaaataatcaaataacagatgctagagtagtttttgaaaaagcaactcatgtt
ccttatactaaagtagacgatctcgcttctgtatggtgtgaatgggcagaaatggaaatt
aggcatggaaattataaagaagcattaaaacttatgcatcgtgcgacagctatgccattc
cgcaaagtagcttatcatgatgagacagaaacagttcaaatgagattatacaaatcttta
aaagtttggtctatgtatgctgatttagaagaaagttttggaacatttaaaacatgcaaa
gctgtatatgacaaaattatagatctaaaaattgcaacaccacaaatcattattaattat
ggtctctttttggaagaaaataaatattttgaagaagcttttagagcttatgaaaaaggt
attgcactctttaaatggcccaatgtttatgatatatggaatacatatcttacaaaattt
ttaaagcgttacggtggaacgaaattagaacgaacgcgagatttatttgaacaatgttta
gaattttgtccaccaaaatatgctaaagctttatatttactatatgcaaaattagaagaa
gaacatggtttagctagacatgcaatgtctgtatacgaacgagcaacaaatgctgttctt
cctgaagaaagatttgagatgttcaatatatatataaaaaaagcagcagatatatatggt
gtaccaaaaacaagacagatatatgaaaaagctattgaagtacttaatgaagataataca
agagaaatgtgtttaagatttgcagaaatggaaacaaaattaggagaagttgatagagct
cgggcaatatatgctcactgcagtcaaatttgtgatccaagagtagcatcaaatttctgg
caaatatggaaagaatttgaagtaagacatggtaatgaagatactatgcgtgaaatgctt
cgaattaaacgtagtgtacaagctatgtacaatactcaagtaaatatgatgtctgcacaa
atgttaaataatacatcgaattcactatcagacgtaccagcagatgcaatgcgtcttttg
gatagtaaaacacaagataatattactacaaataaggacagtattaaatttgttcgtggt
gtgacagaaaaagacggtaaaccggaatctcaagtaaataatccggatgaaatagatatt
gatattaatgatgttaatgaaggagatatagaagaagatatacctattgaaaaacaaact
attccgtcacaagtgttcagtagtttaaaaacaattgatgatgatgattaa
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integrated database retrieval system
