Apis cerana (Asiatic honeybee): 107996127
Help
Entry
107996127 CDS
T07475
Name
(RefSeq) collagen alpha-1(I) chain-like
KO
K19719
collagen type II alpha
Organism
acer
Apis cerana (Asiatic honeybee)
Pathway
acer04512
ECM-receptor interaction
acer04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
acer00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
107996127
04518 Integrin signaling
107996127
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
acer00536
]
107996127
Glycosaminoglycan binding proteins [BR:
acer00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
107996127
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
COLFI
Motif
Other DBs
NCBI-GeneID:
107996127
NCBI-ProteinID:
XP_016909528
LinkDB
All DBs
Position
Unknown
AA seq
1506 aa
AA seq
DB search
MGPKALQLAAAFVVVQLLLPQVNSVRTKLRKQRSKSLQAQQPANGDYMYDYYESYDDYDE
RNETVTTTTPPPPSVTSNINTASRSGLPTETLQTFYRSALSTDSPAQTTIRSFIQEVRDD
LHTTPERNPLPTEIVPGESNMINAVAVPGPRGEPGRPGDIGRPGDAGFPGQPGSPGIPGP
PGPPGPIPDVSMYYQQLALSQASQDKGPTGAAASLYNPDAYLQTQVGPVGPRGPPGPPGP
SGPQGFQGVRGEPGEPGTPGPPGAPGPRGLPGLTGKDGNTGEDGEPGPPGSVGPVGPRGL
PGLPGLPGMKGHRGFPGLDGAKGEQGVSGEKGSMGAPGPMGSVGPIGPAGPRGERGREGP
PGPPGIRGVDGISGPPGQPGAVGKPGSPGFPGNPGIKGDQGAQGPKGSQGIQGPRGETGR
PGQPGESGPQGPQGKDGIPGEKGSTGASGLVGAPGFPGARGQAGIPGNPGIPGAKGMPGF
PGERGFKGDSGVKGDAGIPGPRGLPGPPGNEGKRGKRGMRGPIGTPGPTGERGAPGAPGL
PGPDGPMGSKGQSGDRGPIGPIGPKGAIGDPGRPGSPGLQGTRGLMGRPGAPGKPGNPGE
RGIQGADGKPGEQGPPGLQGLPGPLGLPGEKGYPGEPGKAGEPGNPGPSGPRGDTGKEGA
PGPQGSPGPSGADGERGPPGSPGPRGFQGFPGATGNAGTPGKDGEPGVQGPPGSPGVPGN
RGERGFPGERGTAGGPGLMGPRGEPGVQGLDGPPGLPGVKGDKGISGPSGLVGLPGLRGA
PGESGPKGERGPIGPVGLEGPPGRIGERGPQGQIGPPGPPGEPAERGDPGLPGPPGEIGA
PGNSGERGPQGLQGLQGFPGPQGLIGLPGLKGDRGYPGLKGDQGNSGPPGNPGETGPQGS
IGLTGSKGIRGEPGARGEPGIIGPPGVPGNIGAPGPPGAIGPPGLSGLPGSKGNTGEAGR
PGNPGPIGNPGLPGADGNKGESGSQGPPGIPGPQGPQGSPGERGLPGLPGPSGPIGARGI
RGAPGESGTPGKPGPEGPPGLLGQIGPIGPPGPPGEIGAEGSSGKPGPPGIAGRPGDKGP
PGAIGQTGLPGSPGLPGPPGQAGSPGSAGERGSKGETGPQGVEGQQGPRGKPGPIGLQGP
KGERGEEGQKGLKGHRGFTGLQGLPGPTGPPGEKGIPGLPGLPGKDGEPGPRGTPGRDGN
PGPIGLIGNPGPKGPPGDEGRHGPPGSPGPPGPPGPPGELGLGYDAASLAALLGQGQIKG
PDPLIGDEPPRMFSQDMTEQERQELIQKAYKQLKSSFQKFIKPDGEKNSPAKTCRDLYSA
YPNKLSGEYWIDPNEGDARDAILVYCDAKKRATCLLPNPVHSPEIIHITDQPETWLSEIE
NGMKITYKADSNQIGFLQLLSKNAYQNITYHCKNSIGYFDSERKTYRKGMKFLTWNDAEL
TPRGNQRLRYEMIIDECRTHNGKWGKTIISYQTDKTIRLPIIDVALRDIGKPNQSFYIEI
GNVCYE
NT seq
4521 nt
NT seq
+upstream
nt +downstream
nt
atggggccgaaggcccttcagctggccgcagcgttcgtcgtggttcagcttcttctgccc
caagttaactctgtacggactaaacttaggaaacaacggtcgaagtcactgcaagctcaa
caacctgcgaacggtgattatatgtacgattactatgagagttacgacgactacgatgaa
agaaatgaaactgtaactacaactacaccaccaccaccatctgttacgtctaatatcaat
actgcaagcaggagtggattaccgacagaaacattacaaaccttttatagatcagcattg
tctacagattcaccagcacaaacgacaattcgatcttttattcaagaagttcgagatgat
ctgcatacaactccagaaagaaatccattaccaactgaaattgtgcctggtgaaagtaat
atgatcaatgctgttgctgttcctggaccaagaggagaacctggtagacctggagacatt
ggtcgtccgggagatgctggatttccaggacaacctgggagtccgggaattccaggacca
cctggaccgccaggacctatacctgatgtatcaatgtattatcaacaattagctttatct
caagcaagtcaagataaaggtccaacgggagcagcagcatctttatataatccagatgct
tatttacaaacacaagtaggccctgttggtccccgtggtccaccaggtccacctggacca
tctggaccgcaaggttttcaaggagtacgaggagaacctggcgaacctggaactccaggt
cctccaggtgctccaggcccaagaggattacctggtttaactggaaaagatggtaatacc
ggtgaagatggagaacctggtcctccaggatcagttggtccagtcggtccaagaggtctt
ccaggactacctggtcttcctggtatgaaaggacatcgcggttttccaggattagatggt
gcgaaaggagaacaaggtgtatctggtgaaaaaggatctatgggtgcacctggaccaatg
ggttctgtaggtcctattggtcctgcaggtccacgtggtgaaagaggtagggaaggtcct
ccaggacctccgggaattagaggagtagatggaatttctggtccgcctggacaacctggt
gcagtaggtaaaccaggttctcctggttttccgggtaatccaggtataaaaggagatcaa
ggagcacaaggaccgaaaggaagtcaaggcatacaaggccctcgaggtgaaactggtcgt
cctggacaacctggtgaatcaggaccacaaggacctcaaggaaaagatggaatacctgga
gaaaaaggaagtacaggagcatctggcttagttggtgctccaggttttcctggagctcga
ggacaagctggaatacctggcaatcctggtattccaggagcaaaaggcatgcctggattt
cctggtgaaagaggatttaaaggtgacagcggagttaagggtgatgcaggaattccaggt
ccgcgtggattacctggacctcctggaaatgaaggaaaacgaggaaaaagaggaatgcgc
ggacctattggtacacccggtccaactggtgaacgtggagcaccaggagctccaggtctc
ccaggtcccgatggaccaatgggatcaaaaggtcaatctggagatcgtggacccattggt
ccaataggaccaaaaggagctataggagatcctggtcgcccaggatcacctggattacag
ggtacacgtggattaatgggtcgtcctggtgcacctggaaagccaggtaatccaggggaa
cgaggaatccaaggagctgatggaaaacctggagaacaaggtccacctggcttacaaggt
ctgcctggtccattaggtcttccaggagaaaaaggatatccaggcgagcctggaaaagct
ggtgaacctggaaatcctggaccatctggtcccagaggtgacacaggaaaagaaggagca
ccaggaccacaaggttcgcctggaccatcaggagcagatggtgaacgaggacccccagga
tccccaggtcctagaggttttcagggttttccaggtgcaactggaaatgcgggaacgcca
ggaaaagatggagaaccaggtgttcaaggaccacctggttcaccaggtgtacctggaaat
agaggtgaacgtggctttcctggggaaagaggtactgcaggaggaccaggattaatggga
ccaagaggagaacctggagtacaaggattagatggtcctcctggattacctggagttaaa
ggagataaaggaatttcaggaccatccggattagtaggattgcctggtttacgaggagct
ccaggagaatctggtccaaaaggagaaaggggacctattggaccagttggtcttgaagga
cctccaggacggattggtgaacgtgggcctcaaggccaaattggaccaccaggaccacca
ggtgaaccagcagaacgaggtgatcctggtttacctggtcctccaggagagataggtgct
cctggcaattcaggagagagaggacctcaaggacttcaaggattacaaggtttcccagga
cctcagggacttattggtttaccaggattaaagggcgatcgtggttatccaggtttaaaa
ggagatcaaggaaattctggtccacctggtaatccaggtgaaactggaccacaaggttca
attggtttgactggatctaaaggaatacgaggtgaaccaggtgctagaggagaacctggt
attataggaccaccaggagtaccgggaaacattggtgcaccaggtccaccaggtgcaata
ggaccaccaggactatctggattgccaggtagtaagggtaatactggagaagcaggacga
cctggaaatcctgggccaattggaaatccaggtttacctggtgcagatggaaacaaaggt
gaaagtggttctcaaggtcctccaggtattcctggtcctcaaggtcctcaaggttctcct
ggtgagagaggattacctggtttaccaggtccttcaggaccaataggtgctagaggaata
cgaggagcacctggtgaatctggtacacctggaaaaccaggaccggaaggtccacctgga
cttttagggcaaattggaccaattggaccacctggaccaccaggagaaattggtgcagaa
ggatctagtggtaaacctggacctcctggaatagcaggtcgtcctggagataaaggacca
cctggagcaataggtcaaacgggattaccaggttctccaggtttacctggaccacctggt
caagcaggttctccaggatcagcaggagaaagaggatcaaaaggagaaacaggaccacaa
ggtgtagagggacagcaaggacctagaggaaaaccaggacctattggactacaaggccct
aaaggtgaacgtggtgaagaaggacaaaaaggtttaaaaggtcatagaggatttactggt
ttacaaggtctacctggacctactggtccaccaggagagaaaggaatacctggacttcct
ggactacctggtaaagatggtgaacctggacctagagggactccaggacgagatggtaat
cctggaccaattggattaattggcaatccaggaccaaaaggtcctccaggagatgaaggt
cgtcatggaccaccaggttcacctggtccaccaggtcctccaggcccacctggtgaactt
ggattaggatatgatgctgcttctttagctgctcttctaggacaaggccaaattaaagga
ccagatccattaattggtgatgaaccacctagaatgtttagtcaagacatgacagaacaa
gaaaggcaagaactaattcaaaaagcatataaacaactgaaatcatcattccaaaaattt
ataaaaccagatggtgaaaagaattcaccagctaaaacttgtagagatctttatagtgct
tatcctaataaactttctggagaatattggattgatcccaatgaaggtgatgcaagagat
gcaattttagtgtattgtgatgccaaaaaacgtgcaacatgtttattaccaaatccagtg
cattctccagaaattatacatatcactgatcaaccagaaacttggttaagtgaaatagag
aatggaatgaagattacatataaagcagatagtaatcaaattggttttctgcaacttcta
tcaaaaaatgcatatcaaaatataacatatcactgtaaaaatagtataggctattttgat
tctgaaagaaaaacatatagaaagggtatgaaatttttaacttggaatgatgctgaatta
acaccacgtggaaatcaacgcttaagatatgaaatgataatcgatgaatgtagaacacac
aatggaaaatggggcaagacaataatttcatatcaaactgataaaactataagattgcct
attatagatgtggccttacgagatattggaaaacctaatcaaagtttttatattgaaatt
ggaaatgtttgttatgaataa
DBGET
integrated database retrieval system