KEGG   Apis cerana (Asiatic honeybee): 107996127
Entry
107996127         CDS       T07475                                 
Name
(RefSeq) collagen alpha-1(I) chain-like
  KO
K19719  collagen type II alpha
Organism
acer  Apis cerana (Asiatic honeybee)
Pathway
acer04512  ECM-receptor interaction
acer04518  Integrin signaling
Brite
KEGG Orthology (KO) [BR:acer00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    107996127
   04518 Integrin signaling
    107996127
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00536 Glycosaminoglycan binding proteins [BR:acer00536]
    107996127
Glycosaminoglycan binding proteins [BR:acer00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   107996127
SSDB
Motif
Pfam: Collagen COLFI
Other DBs
NCBI-GeneID: 107996127
NCBI-ProteinID: XP_016909528
LinkDB
Position
Unknown
AA seq 1506 aa
MGPKALQLAAAFVVVQLLLPQVNSVRTKLRKQRSKSLQAQQPANGDYMYDYYESYDDYDE
RNETVTTTTPPPPSVTSNINTASRSGLPTETLQTFYRSALSTDSPAQTTIRSFIQEVRDD
LHTTPERNPLPTEIVPGESNMINAVAVPGPRGEPGRPGDIGRPGDAGFPGQPGSPGIPGP
PGPPGPIPDVSMYYQQLALSQASQDKGPTGAAASLYNPDAYLQTQVGPVGPRGPPGPPGP
SGPQGFQGVRGEPGEPGTPGPPGAPGPRGLPGLTGKDGNTGEDGEPGPPGSVGPVGPRGL
PGLPGLPGMKGHRGFPGLDGAKGEQGVSGEKGSMGAPGPMGSVGPIGPAGPRGERGREGP
PGPPGIRGVDGISGPPGQPGAVGKPGSPGFPGNPGIKGDQGAQGPKGSQGIQGPRGETGR
PGQPGESGPQGPQGKDGIPGEKGSTGASGLVGAPGFPGARGQAGIPGNPGIPGAKGMPGF
PGERGFKGDSGVKGDAGIPGPRGLPGPPGNEGKRGKRGMRGPIGTPGPTGERGAPGAPGL
PGPDGPMGSKGQSGDRGPIGPIGPKGAIGDPGRPGSPGLQGTRGLMGRPGAPGKPGNPGE
RGIQGADGKPGEQGPPGLQGLPGPLGLPGEKGYPGEPGKAGEPGNPGPSGPRGDTGKEGA
PGPQGSPGPSGADGERGPPGSPGPRGFQGFPGATGNAGTPGKDGEPGVQGPPGSPGVPGN
RGERGFPGERGTAGGPGLMGPRGEPGVQGLDGPPGLPGVKGDKGISGPSGLVGLPGLRGA
PGESGPKGERGPIGPVGLEGPPGRIGERGPQGQIGPPGPPGEPAERGDPGLPGPPGEIGA
PGNSGERGPQGLQGLQGFPGPQGLIGLPGLKGDRGYPGLKGDQGNSGPPGNPGETGPQGS
IGLTGSKGIRGEPGARGEPGIIGPPGVPGNIGAPGPPGAIGPPGLSGLPGSKGNTGEAGR
PGNPGPIGNPGLPGADGNKGESGSQGPPGIPGPQGPQGSPGERGLPGLPGPSGPIGARGI
RGAPGESGTPGKPGPEGPPGLLGQIGPIGPPGPPGEIGAEGSSGKPGPPGIAGRPGDKGP
PGAIGQTGLPGSPGLPGPPGQAGSPGSAGERGSKGETGPQGVEGQQGPRGKPGPIGLQGP
KGERGEEGQKGLKGHRGFTGLQGLPGPTGPPGEKGIPGLPGLPGKDGEPGPRGTPGRDGN
PGPIGLIGNPGPKGPPGDEGRHGPPGSPGPPGPPGPPGELGLGYDAASLAALLGQGQIKG
PDPLIGDEPPRMFSQDMTEQERQELIQKAYKQLKSSFQKFIKPDGEKNSPAKTCRDLYSA
YPNKLSGEYWIDPNEGDARDAILVYCDAKKRATCLLPNPVHSPEIIHITDQPETWLSEIE
NGMKITYKADSNQIGFLQLLSKNAYQNITYHCKNSIGYFDSERKTYRKGMKFLTWNDAEL
TPRGNQRLRYEMIIDECRTHNGKWGKTIISYQTDKTIRLPIIDVALRDIGKPNQSFYIEI
GNVCYE
NT seq 4521 nt   +upstreamnt  +downstreamnt
atggggccgaaggcccttcagctggccgcagcgttcgtcgtggttcagcttcttctgccc
caagttaactctgtacggactaaacttaggaaacaacggtcgaagtcactgcaagctcaa
caacctgcgaacggtgattatatgtacgattactatgagagttacgacgactacgatgaa
agaaatgaaactgtaactacaactacaccaccaccaccatctgttacgtctaatatcaat
actgcaagcaggagtggattaccgacagaaacattacaaaccttttatagatcagcattg
tctacagattcaccagcacaaacgacaattcgatcttttattcaagaagttcgagatgat
ctgcatacaactccagaaagaaatccattaccaactgaaattgtgcctggtgaaagtaat
atgatcaatgctgttgctgttcctggaccaagaggagaacctggtagacctggagacatt
ggtcgtccgggagatgctggatttccaggacaacctgggagtccgggaattccaggacca
cctggaccgccaggacctatacctgatgtatcaatgtattatcaacaattagctttatct
caagcaagtcaagataaaggtccaacgggagcagcagcatctttatataatccagatgct
tatttacaaacacaagtaggccctgttggtccccgtggtccaccaggtccacctggacca
tctggaccgcaaggttttcaaggagtacgaggagaacctggcgaacctggaactccaggt
cctccaggtgctccaggcccaagaggattacctggtttaactggaaaagatggtaatacc
ggtgaagatggagaacctggtcctccaggatcagttggtccagtcggtccaagaggtctt
ccaggactacctggtcttcctggtatgaaaggacatcgcggttttccaggattagatggt
gcgaaaggagaacaaggtgtatctggtgaaaaaggatctatgggtgcacctggaccaatg
ggttctgtaggtcctattggtcctgcaggtccacgtggtgaaagaggtagggaaggtcct
ccaggacctccgggaattagaggagtagatggaatttctggtccgcctggacaacctggt
gcagtaggtaaaccaggttctcctggttttccgggtaatccaggtataaaaggagatcaa
ggagcacaaggaccgaaaggaagtcaaggcatacaaggccctcgaggtgaaactggtcgt
cctggacaacctggtgaatcaggaccacaaggacctcaaggaaaagatggaatacctgga
gaaaaaggaagtacaggagcatctggcttagttggtgctccaggttttcctggagctcga
ggacaagctggaatacctggcaatcctggtattccaggagcaaaaggcatgcctggattt
cctggtgaaagaggatttaaaggtgacagcggagttaagggtgatgcaggaattccaggt
ccgcgtggattacctggacctcctggaaatgaaggaaaacgaggaaaaagaggaatgcgc
ggacctattggtacacccggtccaactggtgaacgtggagcaccaggagctccaggtctc
ccaggtcccgatggaccaatgggatcaaaaggtcaatctggagatcgtggacccattggt
ccaataggaccaaaaggagctataggagatcctggtcgcccaggatcacctggattacag
ggtacacgtggattaatgggtcgtcctggtgcacctggaaagccaggtaatccaggggaa
cgaggaatccaaggagctgatggaaaacctggagaacaaggtccacctggcttacaaggt
ctgcctggtccattaggtcttccaggagaaaaaggatatccaggcgagcctggaaaagct
ggtgaacctggaaatcctggaccatctggtcccagaggtgacacaggaaaagaaggagca
ccaggaccacaaggttcgcctggaccatcaggagcagatggtgaacgaggacccccagga
tccccaggtcctagaggttttcagggttttccaggtgcaactggaaatgcgggaacgcca
ggaaaagatggagaaccaggtgttcaaggaccacctggttcaccaggtgtacctggaaat
agaggtgaacgtggctttcctggggaaagaggtactgcaggaggaccaggattaatggga
ccaagaggagaacctggagtacaaggattagatggtcctcctggattacctggagttaaa
ggagataaaggaatttcaggaccatccggattagtaggattgcctggtttacgaggagct
ccaggagaatctggtccaaaaggagaaaggggacctattggaccagttggtcttgaagga
cctccaggacggattggtgaacgtgggcctcaaggccaaattggaccaccaggaccacca
ggtgaaccagcagaacgaggtgatcctggtttacctggtcctccaggagagataggtgct
cctggcaattcaggagagagaggacctcaaggacttcaaggattacaaggtttcccagga
cctcagggacttattggtttaccaggattaaagggcgatcgtggttatccaggtttaaaa
ggagatcaaggaaattctggtccacctggtaatccaggtgaaactggaccacaaggttca
attggtttgactggatctaaaggaatacgaggtgaaccaggtgctagaggagaacctggt
attataggaccaccaggagtaccgggaaacattggtgcaccaggtccaccaggtgcaata
ggaccaccaggactatctggattgccaggtagtaagggtaatactggagaagcaggacga
cctggaaatcctgggccaattggaaatccaggtttacctggtgcagatggaaacaaaggt
gaaagtggttctcaaggtcctccaggtattcctggtcctcaaggtcctcaaggttctcct
ggtgagagaggattacctggtttaccaggtccttcaggaccaataggtgctagaggaata
cgaggagcacctggtgaatctggtacacctggaaaaccaggaccggaaggtccacctgga
cttttagggcaaattggaccaattggaccacctggaccaccaggagaaattggtgcagaa
ggatctagtggtaaacctggacctcctggaatagcaggtcgtcctggagataaaggacca
cctggagcaataggtcaaacgggattaccaggttctccaggtttacctggaccacctggt
caagcaggttctccaggatcagcaggagaaagaggatcaaaaggagaaacaggaccacaa
ggtgtagagggacagcaaggacctagaggaaaaccaggacctattggactacaaggccct
aaaggtgaacgtggtgaagaaggacaaaaaggtttaaaaggtcatagaggatttactggt
ttacaaggtctacctggacctactggtccaccaggagagaaaggaatacctggacttcct
ggactacctggtaaagatggtgaacctggacctagagggactccaggacgagatggtaat
cctggaccaattggattaattggcaatccaggaccaaaaggtcctccaggagatgaaggt
cgtcatggaccaccaggttcacctggtccaccaggtcctccaggcccacctggtgaactt
ggattaggatatgatgctgcttctttagctgctcttctaggacaaggccaaattaaagga
ccagatccattaattggtgatgaaccacctagaatgtttagtcaagacatgacagaacaa
gaaaggcaagaactaattcaaaaagcatataaacaactgaaatcatcattccaaaaattt
ataaaaccagatggtgaaaagaattcaccagctaaaacttgtagagatctttatagtgct
tatcctaataaactttctggagaatattggattgatcccaatgaaggtgatgcaagagat
gcaattttagtgtattgtgatgccaaaaaacgtgcaacatgtttattaccaaatccagtg
cattctccagaaattatacatatcactgatcaaccagaaacttggttaagtgaaatagag
aatggaatgaagattacatataaagcagatagtaatcaaattggttttctgcaacttcta
tcaaaaaatgcatatcaaaatataacatatcactgtaaaaatagtataggctattttgat
tctgaaagaaaaacatatagaaagggtatgaaatttttaacttggaatgatgctgaatta
acaccacgtggaaatcaacgcttaagatatgaaatgataatcgatgaatgtagaacacac
aatggaaaatggggcaagacaataatttcatatcaaactgataaaactataagattgcct
attatagatgtggccttacgagatattggaaaacctaatcaaagtttttatattgaaatt
ggaaatgtttgttatgaataa

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