Apis cerana (Asiatic honeybee): 107996311
Help
Entry
107996311 CDS
T07475
Name
(RefSeq) putative pre-mRNA-splicing factor ATP-dependent RNA helicase PRP1
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
acer
Apis cerana (Asiatic honeybee)
Pathway
acer03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
acer00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107996311
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
acer03041
]
107996311
03009 Ribosome biogenesis [BR:
acer03009
]
107996311
Enzymes [BR:
acer01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
107996311
Spliceosome [BR:
acer03041
]
Complex A
U2 snRNP components
U2 related factors
107996311
Complex B
107996311
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
107996311
Ribosome biogenesis [BR:
acer03009
]
Eukaryotic type
90S particles
Helicases
107996311
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
HA2_N
Helicase_C
DEAD
AAA_19
AAA_22
nSTAND3
SRP54
Flavi_DEAD
ResIII
Lantibiotic_a
T2SSE
AAA_7
ABC_tran
TsaE
ATPase
AAA_25
Motif
Other DBs
NCBI-GeneID:
107996311
NCBI-ProteinID:
XP_016909780
LinkDB
All DBs
Position
Unknown
AA seq
718 aa
AA seq
DB search
MSKRRIEVVDPYIKRKADGSAASNSTTTPSTAPKNQVQINPYTSLPYTPRYHEFYKKRIT
LPVFEYRADFMRLLAQHQCIVLVGETGSGKTTQIPQWCVEYSMRIGNKGVACTQPRRVAA
MSVAQRVSEEMDVALGQEVGYSIRFEDCSSPKTILKYMTDGMLLREGMSDPMLDAYQVIL
LDEAHERTLATDLLMGVLKEVIKQRPDLKLVIMSATLDAGKFQQYFDNAPLMNVPGRTHP
VEIFYTQEPERDYLEAAIRTVTQIHMCEEVVGDLLLFLTGQEEIEEACKRIKREMDNLGP
EVGELKCIPLYSTLPPNLQQRIFEPTPPTKPNGAIGRKVVVSTNIAETSLTIDGVVFVID
PGFAKQKVYNPRIRVESLLVSPISKASAQQRAGRAGRTRPGKCFRLYTEKAYKNEMQDNT
YPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPETLMRALELLNYLAALDDDGNLTDL
GAVMAEFPLDPQLAKMLIASCNHNCSNEILSITAMLSVPQCFVRPNESKKAADDAKMRFA
HIDGDHLTLLNVYHAFKQNFEDPQWCYDNFVNYRSLKSGDNVRQQLSRIMDRFCLKRTST
EFTSKDYYINIRKALVNGFFMQVAHLERTGHYLTIKDNQIVQLHPSSCLDHKPEWVIYNE
FVLTTKNYIRTVTDIKPDWLLKIAPQYYDLQNFPQCEAKRQLEVIQAKLDSKQYQEGF
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaacggagaatcgaggttgtggatccgtatattaaacggaaagcagatggctca
gcagcatctaactctacaactacaccttcaacagcaccaaaaaatcaagttcagataaat
ccttatactagtctaccttatacaccaagatatcatgaattttataaaaaaagaatcact
ctacctgtatttgaatatcgtgctgattttatgagattattagcacaacatcaatgtatt
gtacttgttggagaaacaggctcaggtaaaactacacaaataccacaatggtgtgtagaa
tattcaatgcgtattggcaacaaaggtgttgcttgtactcagccaagaagagtagcagct
atgtctgttgcacaaagagtttcggaagagatggatgttgcattaggccaagaagtagga
tacagcattcgttttgaagattgtagttctccaaaaactatattgaaatatatgactgat
ggtatgcttttacgtgaaggcatgtcagatcctatgctagatgcttatcaagtgatatta
ttagatgaagctcatgaaagaactttagccacagacttgcttatgggtgtgttaaaagaa
gtgattaaacaaagaccagatttgaaacttgtgattatgagtgcaactttagatgctgga
aaatttcaacagtattttgataatgcacctttaatgaatgtacctggcagaactcatcct
gttgaaattttttatacacaagagcctgaaagagattacttagaggctgctatcagaact
gttactcaaatacatatgtgtgaagaagtagtaggagatttactcttatttttaactggt
caagaagaaattgaagaagcttgtaaaagaattaaacgagaaatggataatttaggtcca
gaagtaggtgaactcaagtgtataccactctattctacactgcctccaaatcttcaacaa
agaatctttgaaccaacaccacctacaaaacctaacggtgctattggtagaaaagtagta
gtttcgactaatatcgcggaaacatcattaaccatcgatggtgtggtttttgtcattgat
cctggatttgcaaagcaaaaggtatataatcccaggatccgtgtagaatctcttcttgta
tcacctattagtaaagcttctgcacaacaaagagctggtagagctggccgtacaagacct
ggaaaatgtttcagattatatacagaaaaggcatataaaaatgaaatgcaagataacact
tatcctgaaattttaaggtctaatcttggtagtgttgtattacaattgaagaaacttggt
attgatgacttggtacattttgattttatggatcctcctgcaccagaaacacttatgaga
gctctagaacttcttaattatttggccgctttagatgatgatggaaatctcacagatttg
ggtgctgtgatggcagaatttccattagatccacaattggcaaaaatgctcattgcatct
tgcaatcataattgcagtaatgagatattgagcattacagctatgttgtcagtcccgcag
tgttttgtgaggccaaatgaatcaaagaaagctgcggatgatgctaaaatgcgatttgca
catatcgatggagaccacttaacgttattgaatgtctatcatgcttttaagcaaaatttc
gaagatccacaatggtgttacgataatttcgtcaattatcgatctttaaaaagtggtgat
aatgttagacaacaactaagtagaataatggatagattttgtttaaaacgtacttcaaca
gagttcacatcaaaagattattatattaatattagaaaagctcttgtaaacggttttttc
atgcaggtcgctcatttagagaggactggtcattatttaactattaaagataatcaaatt
gtacaacttcatccaagcagttgcttagatcataaacctgagtgggtaatttataatgaa
tttgtgcttacgaccaaaaattatatcagaacagttaccgatattaaacctgattggttg
cttaaaatagcaccacaatattatgatttacaaaatttcccacaatgtgaagcaaagagg
caattggaagtaattcaagcgaaattagattcaaaacagtatcaggaaggattctaa
DBGET
integrated database retrieval system
