KEGG   Apis cerana (Asiatic honeybee): 107997304
Entry
107997304         CDS       T07475                                 
Name
(RefSeq) THO complex subunit 6 homolog
  KO
K13175  THO complex subunit 6
Organism
acer  Apis cerana (Asiatic honeybee)
Pathway
acer03013  Nucleocytoplasmic transport
acer03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:acer00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    107997304
  09122 Translation
   03013 Nucleocytoplasmic transport
    107997304
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:acer03019]
    107997304
   03041 Spliceosome [BR:acer03041]
    107997304
Messenger RNA biogenesis [BR:acer03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     107997304
Spliceosome [BR:acer03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    107997304
SSDB
Motif
Pfam: Beta-prop_IFT122_1st Beta-prop_THOC3 WD40 WD40_WDHD1_1st Beta-prop_WDR5 Beta-prop_WDR3_1st WD40_CDC20-Fz WD40_Prp19 WDR55 Beta-prop_EML_2 Beta-prop_TEP1_2nd Beta-prop_NOL10_N Beta-prop_WDR3_2nd Beta-prop_WDR41 NBCH_WD40 Beta-prop_WDR36-Utp21_1st ANAPC4_WD40 Beta-prop_WDR36-Utp21_2nd Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd DSE1_N Beta-prop_WDR75_1st WD40_Gbeta Beta-prop_ACSF4 Nucleoporin_N EIF3I Beta-prop_TEP1_C CFAP251_N Beta-prop_WDR90_POC16_2nd Beta-prop_Vps41 Beta-prop_RIG_2nd Beta-prop_IFT140_1st WD40_like Beta-prop_SCAP Beta-prop_DCAF4 Beta-prop_IFT140_2nd WDR90_beta-prop_4th WDR54
Other DBs
NCBI-GeneID: 107997304
NCBI-ProteinID: XP_016911282
LinkDB
Position
Unknown
AA seq 338 aa
MKINQEVMTDTINQKLFYNTVLSQTFSPDGNYLLAGNIYGDISVFELSKALGPHKVEENE
LQGPNYHFTAHSNQQIESMISTDNFLVTGTSGEICGWDWKIITSSKNPKNKVSWTIQLPV
NKDSYEKPDVNYLVYSKLNNLLYAGCGDNNIYVISLEDGRILKSLEGHTDYIHCLSLMGN
QLASCSEDGTVRLWDLRKKENTNILTPHLVDKVARPRLGKWIGAIDFTDDWLLCGGGPNL
SLWHMRTMEAATVFDLPDEGIHVANIYEERVIAAGSAPHVYHLTYQGEMLAKVPTSSNTV
YSIIYQETPQKVFSIAGSSNNLDICTNFNYRELILKFA
NT seq 1017 nt   +upstreamnt  +downstreamnt
atgaaaattaatcaagaagtgatgacagatacgattaatcaaaagttattttataatact
gtattgtcacaaacattttctccagatggaaattatttattggctggaaatatttatgga
gatatttcagtttttgagttatcaaaagctttaggaccacataaagttgaagaaaatgaa
ttacaaggtcctaattatcacttcactgctcattccaatcaacagatagaaagtatgatt
tcaacagacaattttttagtaacaggaacatcaggagaaatatgtggatgggattggaaa
ataattacttcaagtaaaaatccaaaaaataaagtttcatggactatacaacttcctgtt
aataaggatagttatgaaaaaccagatgtaaattatttagtatattctaaattaaataat
cttctatatgctggttgtggtgataacaatatttatgtaattagtttagaagatggtaga
atattaaaaagcttagaaggacatacagattacattcattgtctatctttaatgggtaat
cagttagcttcatgcagcgaagatggaacagtgagattatgggatttacggaaaaaagaa
aatactaatatattaacacctcatttagtagacaaagttgcaagaccaagattaggcaaa
tggattggtgctatagatttcacagatgattggctgttatgtggaggtggtccaaattta
tctttatggcatatgcgcacgatggaagcagccactgtattcgatcttccagatgaaggt
atccatgtagcaaatatttatgaagagcgtgtaatagccgctggatcagcgcctcatgtt
tatcaccttacttatcaaggagaaatgttggctaaagtgccaacttccagtaacactgta
tacagtattatttatcaagaaacaccgcaaaaagtatttagtatagctggttcatcaaat
aaccttgatatttgtacgaattttaattatcgtgaattaatattaaagttcgcataa

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