Apis cerana (Asiatic honeybee): 107997743
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Entry
107997743 CDS
T07475
Name
(RefSeq) collagen alpha-1(IX) chain isoform X1
KO
K06823
collagen type XVIII alpha
Organism
acer
Apis cerana (Asiatic honeybee)
Brite
KEGG Orthology (KO) [BR:
acer00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
acer04147
]
107997743
00535 Proteoglycans [BR:
acer00535
]
107997743
00536 Glycosaminoglycan binding proteins [BR:
acer00536
]
107997743
Exosome [BR:
acer04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
107997743
Proteoglycans [BR:
acer00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
107997743
Glycosaminoglycan binding proteins [BR:
acer00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
107997743
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Endostatin
Collagen
Collagen_trimer
Laminin_G_3
DUF1554
Motif
Other DBs
NCBI-GeneID:
107997743
NCBI-ProteinID:
XP_016912025
LinkDB
All DBs
Position
Unknown
AA seq
1177 aa
AA seq
DB search
MRSRLQSLIFALFCVTRVNADFFAEKKEINYDLLEAAVASVDTDDNNLYIDDGLDGFPSF
GFRPGSEVKQPYRLYLPEKLPAEFTLVATFKPMSFRTSYLFAVLNPFETVVQLGIRISDG
PGTNQNVSLVYTNSDLHSHSEEVAKFTVPKLSRKWSKIVIRVSTTDVTLYLNCHEMARQR
VTRIPLELVFDTASTLYIAQAGPHIQEKYDGLLQSLKLYPGHPADLVKCTADFNFDQDVD
LGSGEIDNEVIDNGSGFDINLTDIGEEDDEDRSEESNPPPFITPPPPNPDYKGPKGEKGD
KGDKGESVRGPPGPPGPPGQDEGPPGKKGEPGTCTCNATALMASFTMPKMIQGPKGEQGV
PGQEGKQGQMGLTGVAGPPGERGLEGPQGSKGDKGDVGIPGPEGPQGQKGEPGRDGIPGE
KGAQGPPGPPGKGEFSGYDPSWKPRGIYRTEGITMRPGLPGQKGEAGLPGSPGPKGETGI
AGAKGNKGEPGHKGAKGDHGNEGARGIQGSKGEPGAPGAPGLPGAPGENGRPAEKGDKGD
TGPEGKPGPPGAPGPPGLPGLSGPGGVNVGESMLREKGDKGEGGARGYKGDKGTKGEKGD
KGDSGPAGIPGVNGIQGPQGNKGEPGKDGVAGVQGIAGAKGEKGERGPPGATAIASSGDY
ITIKGEKGAEGKRGRRGRPGPPGPVGPPGKPGAMGEIGLPGWVNTMKGRPGTPGLPGPVG
PAGPKGEKGEPGTPSPYGVSVGVKGDKGDDGFPGIPGQPGREGQRGPPGPPGPPGPPSQG
NYIPVPGPPGPPGPPGPPGLSLIGQKGEPGIGRSHIFGERDYYGVRQVQSVKKKHIPYPT
LQGPRTSLDELKALRELKQLKELKEHLGAGTTATRGPLESTTKIVPGAVTFQNTEAMTKM
SAVSPVGTLAYIIDEQALLVRVNNGWQYIALGSLLPITTPAPPTTSPPPVNPPFEASNLI
NQIPVKADGTGWYPRMLRMAALNEPFTGDMHGVRGADYACYRQAKRAGLRGTFRAFLSSR
VQNVDSIVRLGDRDLPIVNIKGDVLFNSWKEMFNGNGAYFSQNPRIYSFNGKNILTDFAW
PEKVAWHGSHKLGDRAMDTYCDAWHSSSSDRYGLGSPLTGGRLLEQVRYSCDNKFALLCI
EVTSETTRRRRNVEIAEDEDEMSENDYKEYLDSLMED
NT seq
3534 nt
NT seq
+upstream
nt +downstream
nt
atgcggtctagattgcagtcgctgatattcgccttgttctgtgtgacgcgcgtcaacgcg
gactttttcgccgagaagaaagaaataaattatgatttactcgaggctgccgtggcgtct
gtcgatacggacgacaataatttgtacatcgacgatggtctcgatggatttccaagtttt
ggtttccgacccggatccgaagttaaacaaccctatcgattatacctgccggaaaaattg
ccagcagagttcacccttgtggcaactttcaaaccgatgtccttcaggaccagttatctc
ttcgcggttttgaaccccttcgagacagtggtgcaattaggaattcgtatatcggacgga
ccaggcaccaatcaaaatgtctcattggtgtacaccaactccgatctgcattcgcattca
gaagaggtggcgaaattcacggtgccaaagttgtcgagaaaatggtctaaaatcgttatt
agagtatcaacgacggatgtcactttgtacctgaattgtcacgagatggccaggcaacga
gtgacaagaattcctctggaactggtgttcgacacggccagcacgttgtacatcgctcaa
gctggacctcatatccaagaaaagtacgacggtctactgcaatccttgaagctctatccc
ggacatccagcggatttggtaaaatgcacggccgactttaacttcgaccaagatgtggat
ctcggctcaggtgaaatcgataacgaggtgatcgataatggttcaggatttgatattaat
ttgacagacatcggagaagaggatgacgaagacagaagcgaggaaagcaatccaccgcca
ttcatcacaccccctcctcccaacccggactacaagggaccgaaaggtgagaaaggtgat
aaaggcgacaagggtgagagcgttagaggacctccaggtcctcctggtccacctggtcaa
gatgagggtccgccagggaagaaaggagaacccggcacgtgcacctgcaatgcaacagcc
ctgatggcatcctttacgatgccaaagatgatccagggaccgaaaggagaacaaggggtg
ccggggcaagaaggaaaacaaggccaaatggggctgacgggtgttgctggaccgccagga
gagagagggctagaagggccacagggatccaagggagataaaggtgacgtggggataccg
ggaccggaaggtcctcaagggcaaaaaggagagcctggccgcgatggaataccaggagaa
aagggcgctcaaggacctccaggccccccaggaaagggagaattctccggatacgatccc
agttggaaaccccggggcatttataggacggaaggcatcacgatgaggccaggactgcca
ggacagaaaggcgaggcaggccttccgggaagtccaggaccaaaaggagagacaggaatc
gctggtgccaaaggtaacaaaggcgagccaggccacaaaggcgcgaaaggggatcacggg
aacgagggtgctcgaggaattcaaggatcgaagggtgaacctggtgcaccgggagcgccg
ggtctccctggtgcgccaggtgagaatggaaggccagccgaaaagggtgataaaggagac
acaggaccagaagggaagccaggccccccgggagcgcctggaccgccaggattgcctgga
ttaagcggtcctggaggagtaaacgttggagaatcgatgttaagggaaaaaggcgacaaa
ggagagggtggtgcgcgtggttacaaaggagacaagggcaccaaaggcgagaagggagat
aaaggtgattctggaccagccggaattcccggtgtaaatggtattcaaggaccgcaaggg
aacaaaggcgagccaggcaaggatggagttgccggtgttcagggaatcgcgggtgcaaaa
ggtgaaaaaggtgagagaggtccgccaggagccaccgctatagcgagttccggagactac
atcacgatcaagggtgaaaagggcgcggaggggaagagggggaggagaggacgtcctgga
ccaccgggacccgtcggcccacctggaaagccgggagcgatgggagaaattgggttgcct
ggatgggtgaacaccatgaaaggtcgtcctggaactcccggacttcctggacctgttgga
ccagcggggcccaagggagaaaaaggagaaccgggcacaccgagcccttatggagtctct
gtcggcgtaaagggtgataaaggagacgatggtttccctggaattccaggacaaccagga
agggaaggtcaaagagggccgccaggacctccaggaccacctggaccaccatctcaagga
aactatattccagtcccgggacctccaggacctcctgggccaccaggtccgcccggatta
tctttaatcggacagaaaggagagccaggaatcggcagaagtcatatctttggtgaaaga
gattattatggagttagacaagttcaaagtgttaaaaaaaaacacattccatatcctacg
ctgcaaggaccaagaactagtctagatgaactgaaagcactgcgggaattaaaacaattg
aaggaactaaaagaacatttaggtgctggaacaaccgcaaccagaggtcctctcgaaagc
acaacgaagattgtaccaggagcagtaacttttcaaaataccgaagctatgacgaaaatg
tctgccgtgagtccagttggaacattagcttacattatagacgaacaagcgttactcgtt
agagtgaacaatggctggcaatacattgcattgggctcacttttaccaataactacacca
gcaccaccaactacatcaccacccccagtgaatccaccttttgaggcttctaatctgatc
aatcaaatacccgtaaaagcagatggaacaggatggtatccacgaatgttacgaatggct
gctttgaacgaaccctttaccggggacatgcacggtgtacgaggagctgactacgcttgt
tatcgacaagcgaagcgagctggtttgaggggtacattccgcgcattcctcagctctaga
gttcaaaatgttgatagcatcgtgaggctcggagatcgagatttgcctatcgttaacata
aaaggggacgttctcttcaactcgtggaaggaaatgttcaacggaaacggggcctatttc
tcacaaaacccaagaatctacagtttcaatgggaaaaatatcctcactgattttgcatgg
ccagaaaaagtggcatggcatggatcacataaattaggagaccgagcaatggacacgtat
tgtgatgcttggcattcaagtagttcagatcgttacggattaggatcaccgttaacagga
ggacgcctcttggaacaagttcgttattcttgcgacaacaagttcgcactactctgtata
gaagtaaccagcgagaccacaaggaggaggagaaacgtcgaaattgcggaggacgaggat
gagatgtcggaaaacgattacaaggaatacttggattctctgatggaagactaa
DBGET
integrated database retrieval system
