Apis cerana (Asiatic honeybee): 107999015
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Entry
107999015 CDS
T07475
Name
(RefSeq) tRNA-splicing ligase RtcB homolog
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
acer
Apis cerana (Asiatic honeybee)
Brite
KEGG Orthology (KO) [BR:
acer00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
acer03016
]
107999015
Enzymes [BR:
acer01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
107999015
Transfer RNA biogenesis [BR:
acer03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
107999015
Prokaryotic type
tRNA splicing ligases
107999015
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RtcB
Motif
Other DBs
NCBI-GeneID:
107999015
NCBI-ProteinID:
XP_016914129
LinkDB
All DBs
Position
Unknown
AA seq
506 aa
AA seq
DB search
MVVRQYQEELKFLEKITDTCWRIKKGFQPNMKVEGVFYVNNTLERLMFDELKNACRPGAV
GGFLPGMKQIANVAALPGIVWRSVGLPDVHSGYGFAIGNMAAFDMNDPKSIVSPGGVGFD
INCGVRLLRTNLFEEDVQPVKEQLAQSMFDHIPVGVGSKGIIPMNARDLEEALEMGMDWS
LREGYIWAEDKEHCEEYGRMLNADSSKVSMRAKKRGLPQLGTLGAGNHYAEIQVVDEIYD
KWAACKMGIEEKGQICVMIHSGSRGFGHQVATDALVQMEKAMKRDNIETNDRQLACAHIK
SQEGQDYLKSMAAAANFAWVNRSSMTFLSRQAFAKQFRLSPDDLDMHVIYDVSHNIAKIE
EHMVDGKQKTLLVHRKGSTRAFPPHHPLIPVDYQLTGQPVLIGGTMGTCSYVLTGTDQAM
KETFGSTCHGAGRALSRAKSRRNLDYTDVLEKLERQGISIRVASPKLVMEEAPESYKNVT
DVVNTCHAAGISRKCIKLRPIAVIKG
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atggtagttcggcaatatcaagaagaattaaaatttttagaaaaaataactgatacatgc
tggagaataaaaaaaggttttcaacctaatatgaaggttgaaggtgttttttatgtaaat
aatacattggaacgtttaatgtttgatgaattgaaaaatgcatgtagaccaggagcagta
ggtggctttcttccaggcatgaaacaaattgctaatgttgctgcccttcctggaattgtt
tggagatctgttggattacctgatgtacattctggatatggttttgctattggtaatatg
gcagcatttgatatgaatgatccaaaatctatagtatcacctggtggagtaggatttgat
ataaattgtggagtaagattattaagaactaatctttttgaagaagatgttcaacctgta
aaggaacaacttgcccaaagtatgtttgatcatattcctgttggtgttggttcaaaagga
attatacctatgaatgcacgtgatttagaagaagctttagaaatgggaatggattggtct
ctcagagaaggttatatttgggcagaagataaagaacattgtgaagaatatggtagaatg
cttaatgcagattcttcaaaagtatcaatgagagctaaaaaacgtgggcttccacagtta
ggaacattaggagcaggaaatcattatgctgagattcaagttgtagatgaaatttatgat
aaatgggctgcatgcaaaatgggaattgaagaaaaaggtcaaatttgtgttatgattcat
tctggtagcagaggatttggacatcaagttgcaactgatgctcttgtacaaatggaaaaa
gctatgaaacgagataatattgaaactaatgatagacaattagcatgtgctcatatcaaa
tctcaagaaggtcaagattatctaaaatcaatggccgcagccgccaattttgcttgggtt
aatagaagctctatgacatttcttagtcgacaggcatttgccaagcaattccgattatct
cctgatgatttagatatgcatgttatatatgatgtctctcataatattgcaaaaatagaa
gaacatatggtcgatggaaaacagaaaacacttctagtacatagaaaaggatcaacaaga
gcatttccacctcatcatcctttgatccctgtagattatcaattaacaggtcaacctgtt
ttaattggaggtactatgggaacttgtagttatgttctcactggaactgatcaagctatg
aaagaaacatttggatctacttgtcatggagcaggacgagctttatctagagctaagtca
cgtagaaacttggattatacggatgtattagaaaaattagaaaggcaagggatatcgatt
agagtcgcttcgcctaaattagtaatggaagaagcaccagaatcttataaaaatgtaaca
gatgttgtaaatacatgtcatgctgcaggcatttcgcgaaaatgtataaaattaagaccg
attgcagttatcaaaggataa
DBGET
integrated database retrieval system
