Apis cerana (Asiatic honeybee): 107999758
Help
Entry
107999758 CDS
T07475
Name
(RefSeq) collagen alpha-1(IV) chain
KO
K06237
collagen type IV alpha
Organism
acer
Apis cerana (Asiatic honeybee)
Pathway
acer04382
Cornified envelope formation
acer04512
ECM-receptor interaction
acer04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
acer00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
107999758
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
107999758
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
107999758
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
acer04147
]
107999758
00536 Glycosaminoglycan binding proteins [BR:
acer00536
]
107999758
Exosome [BR:
acer04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
107999758
Glycosaminoglycan binding proteins [BR:
acer00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
107999758
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
107999758
NCBI-ProteinID:
XP_016915261
LinkDB
All DBs
Position
Unknown
AA seq
1928 aa
AA seq
DB search
MTRLGLRFVASAVFLAGIASGQYNHTSWSYNPPPVVPLGRGDIGKPNNTDDDYNISPRWK
TFVTNNEGSDEADRRYLSNQGPTDDDRYDYGQRTDDSGGGYHTNYAGFDQGSYNQGREQI
PLDPYNQESGDTYGRPRGYEDSYGREGEGSRGSYGNGYRETYGSRDDYGRVDPYDQRGYS
QRGGGGYGAAGDSDTYPSSYTVVPVPGQIPPRNCTGSACCVPKCFAEKGSRGPPGILGPQ
GPKGQRGFPGAEGLLGPKGDKGEPGPQGPRGTKGDRGKMGVPGFTGIAGVPGVQGPPGAP
GIPGRDGCNGTDGEPGARGYPGEVGPRGFRGPPGLKGQKGQPGFAGRFPVGQKGEPGIDG
VRGPPGPPGPQGEHGFPGPKGERGPPGPIGLQGQKGEKGNMGLAFEGPKGDKGQKGEIGP
PGTPGPLEPFHGMTEEVIAPQGDRGEKGDKGEMGPDGFKGEPGPIGDQGISGSPGMKGEK
GLPGAPGIRGRDGFSGPPGPPGRKGDRGYDGLDGLPGRPGQKGEPGRDGPMGVPGLRGPP
GPPGGGKGTPGPPGPKGPRGFPGPTGPRGADGYPGDPGPRGPIGPAGGPGSQGIPGPEGL
PGEKGAKGEPGITGFPGPTGPRGFDGPPGLPGPRGLPGEKGASLVGPKGMDGAPGLDGEK
GQKGERGYAGPRGVPGDVDGIPGPPGEAGLPGERGTPGKDGTPGFSGAPGEKGDAGFCLP
PPPVFPGPKGDRGLDGTPGLPGPRGPPGERGFPGEPGADGLPGPIGPPGLPGKDGIPGAA
GPQGEPGTPAVITSNMIKTEKGDKGIRGEVGRPGPPGPQGPAGEKGALGFAGFPGPKGTA
GDRGFPGQDGVPGRPGIPGRKGERGLSVKGEPGEPGRPGQIGLKGEPGSYGQKGEPGQCP
PLDLINSKGDRGAPGEKGEPGPPGRDGLSGDKGLQGFAGPPGPPGQIGPPGPVGPRGLPG
PRGDKGNTGPMGFPGEPGREGPRGFPGAPAQKGEKGEPGISVKGSPGLPGPPGDKGEKGL
PGPPGKDGPIGLQGLPGFVGEKGDTGEPGISGLPGTPGEKGDTGPIGPPGPPGIAGLPGK
DGNKGEPGLPGAGGRAGLPGFPGVKGDRGEPGIDGSKGYPGRRGLPGATGRPGQEGAPGM
KGERGEKGSAGFPGLPGIEGKPGRPGPPGLKGDLGPPGAPGLPGVIGYEGFKGDRGPPGL
PGRKGEPGQVSEKGQKGEPGMPGIRGPSGIPGRSGVDGAKGEPGLPGIGRDGLPGPKGEP
GPPGRDGLPGFQGLKGDAGVRGFPGFKGDMGPIGAPGEPGLPGINGLPGEQGDVGPPGAP
GLPGLEGEMGAPGHPGIPGAKGDRGIPGAVGLPGIPGAIGEKGDRGPPGPTISIKGEKGE
PGIPGLRGAPGEKGDRGLEGLSGYEGEKGDSGAPGPVGNPGPSGLPGAKGDEGPRGPTGV
PGLTIKGEKGLPGMPGKHGREGIPGRPGEKGEQGLPGLPGYKGERGPPGPIGLQGEKGDM
GLMGPPGLTGRDGQPGAKGFPGLPGERGEKGDAGLRGPPGPIGQKGEPGFPGPSGIDGIP
GEKGDRGWDGVSGLPGPVGEKGDRGYPGPVGLMGVVGHVGQKGDKGDDCIEPPMGPKGDR
GFPGPVGPPGPPGEKGIPGPPGFPGSNGVKGAIGFQGQPGPVGLPGLPGPVGAPGLPGLQ
GPVGVPGIPGEPGLPCEPASDYLTGILLVKHSQSQLLPACDAGHIKLWEGYSLLFTDGDE
RAHSQDLGYAGSCVRKFSTMPFLFCDINNVCHYGNRGDRSYWLSTTSPIPMMPVQESEIE
QYISRCVVCEVPANVLAVHSQSLNIPDCPQGWTGLWIGYSFLMHTGAGAQGGGQSLSSSG
SCLEDFRATPFIECNGNKGQCHYYMNEISFWMATIEDRQQFQAPEQQTLKAGNLRSKISR
CQVCIKNT
NT seq
5787 nt
NT seq
+upstream
nt +downstream
nt
atgacccggttgggattgcgattcgtcgcatccgcagtgttcctggccgggatagcgagt
gggcaatataatcatacgtcatggtcgtacaatcctccgcctgttgttcctctcggacgg
ggtgatatcggaaaaccgaacaataccgatgacgattataatatttcaccacgatggaaa
acttttgttacgaataacgaaggttcggatgaagcggacaggcggtacttaagcaatcaa
ggtccgaccgacgatgatcgatacgattacggtcaaagaaccgacgattccgggggagga
tatcataccaattatgccggcttcgatcaaggatcgtacaatcaaggccgagaacaaatc
cctttggatccttacaatcaagaatctggcgatacttacggaaggcctcgaggttacgag
gactcttacgggagagagggggagggcagcagaggttcttacgggaatggataccgagaa
acttatggatcaagggacgattacggacgcgtggatccttacgatcagcggggatattcg
caacgtggaggagggggatacggcgcggctggggattcggacacttatccgagcagttac
acggttgtaccggttccgggacagatcccgcctcggaattgtaccggatcggcttgctgc
gtgcccaaatgtttcgcggagaaagggtccaggggaccaccaggtatattgggaccacag
gggccgaaaggccagaggggatttccgggcgcggaaggtctgttggggccaaagggggac
aaaggtgaacccggtcctcagggaccgcgtggaacgaaaggtgataggggtaaaatgggt
gtacctgggttcactggtatcgctggtgtaccgggagttcaaggtccgcccggagctcca
ggtattccgggtcgtgacggttgcaatggaacagacggtgagcctggtgcgcgtggttat
cccggagaggttggtccccgcggttttcgaggtcctcctgggctgaagggacaaaaaggt
caaccaggttttgccggtagatttcctgtaggtcaaaagggcgagcccggtatcgatggc
gtaagagggcccccaggtccaccgggtccgcaaggagaacacggatttccaggcccgaag
ggcgagcgtggcccacctggtccgataggactgcaagggcaaaagggagaaaagggaaat
atgggtcttgcgttcgagggtccgaagggtgacaaaggccagaagggagagataggacct
cccggaacacccggccctctggagccgttccacggaatgacggaagaagtaatagctccg
caaggggatcgtggtgaaaaaggagacaagggtgaaatggggccggacggtttcaaagga
gagccgggtccaatcggagatcaaggtatttctggtagtccgggtatgaaaggagagaaa
ggtcttccaggggcgccaggtattcgcggtagggatggtttctcgggtcctccgggtcca
cctggacggaaaggtgatcgaggttacgacgggttggacggtcttcccggtcgtcctgga
cagaaaggtgaaccgggacgagacgggccaatgggcgttccaggcttgcgaggacctcct
ggtccacccgggggtggaaagggtacgccgggtccaccggggccgaaagggcctcgaggt
tttccggggcctaccgggcctcgtggcgccgacggatatccaggcgatccaggtcccaga
ggtcccatagggccagccggagggcccggctcgcaaggtattcccggcccggaaggtttg
ccgggcgagaaaggtgcgaagggagagcctgggatcacgggattcccggggccgacgggc
ccacggggattcgacggccctccgggattaccaggtccacggggattgccgggagagaag
ggcgcctcgctcgtggggcctaaagggatggatggagcgcccggtttggacggagagaaa
gggcaaaagggggaacgcggctacgcgggaccacgaggagtgccgggtgacgtggacggc
attccagggcctccgggcgaggccggtcttccgggcgaacggggaactccggggaaagac
gggactccaggattctcgggggcgcccggtgaaaaaggagacgcgggcttttgtctacct
cctcccccggtgtttccaggacctaaaggcgatcgcggtctagacggtacacctggactc
cccggacctagaggtccacccggggaacgaggattcccaggggaacccggcgccgacgga
ttacccgggccgatcggcccaccaggactaccggggaaagatggtattcctggcgcggct
ggtccgcaaggagaacctggaacgccagctgtgattacgtccaatatgattaaaacggag
aagggcgacaaaggtataaggggcgaggtgggaaggccaggtccaccgggtccccaaggt
ccagccggggagaagggcgctctaggatttgctggtttcccgggtccgaagggtaccgct
ggtgacagaggatttccaggccaagatggagttcctggaaggccaggtattccaggtcga
aaaggagagcgtgggctgagcgtgaaaggggagcctggagaaccgggccgtccgggtcaa
ataggtttgaaaggtgaacctggttcgtacggacaaaaaggagaacccggccagtgtcca
ccgctcgatttgatcaacagcaagggagacagaggcgcccctggcgagaaaggagagcca
ggcccaccgggaagagacggcttgagcggtgacaaaggtttacaaggattcgcgggtccg
cctggtccccctggacaaatcggtccacctggaccggtagggccaagagggttgccgggt
ccgcgtggcgacaagggtaacacggggccgatgggtttccccggggaacctggtcgcgaa
gggccgagaggatttccgggtgctccagcgcagaagggagaaaagggcgagcctgggata
tcggtgaagggcagccctggattgccgggtccaccgggcgacaagggggagaaaggtctc
cctgggccaccgggaaaagacggtcctatcggtttgcaaggtttgccgggattcgtggga
gagaagggcgacacgggtgagccggggataagcgggttacccggcacgccaggggagaaa
ggagataccggtccgatcggccctcctggtcctcctggtatcgcgggattacccggaaaa
gacggaaacaaaggtgaaccgggattgccgggggcaggtggaagggcgggccttccggga
tttccaggcgtgaaaggcgatcgaggtgagccgggtatcgacggatcgaaaggttatccg
ggaaggcgtgggttgccgggcgcgactggtagacccggtcaggaaggtgcgcctggtatg
aaaggagaacgtggcgagaaagggtcggctgggttccccggattgcccggaatcgaaggg
aaacccggtcgtcctggaccacctggactgaaaggagacttgggtcctcccggcgctccg
ggtcttccgggtgttataggatacgaaggattcaaaggtgatcgaggtccaccgggatta
ccgggacgtaaaggtgaaccgggtcaggtatcggagaaagggcagaagggtgagccagga
atgcctgggatccgtggtccttccggtatccctggtagaagcggcgtggatggggcgaaa
ggagagcctggattgccaggtatcggccgggatggtctgcctggtcccaagggagaaccc
gggccaccaggtcgtgacggtttgccaggattccaagggttgaaaggtgacgctggcgtg
agaggttttcccggttttaaaggagacatgggaccgatcggggctcccggtgagcctgga
ttacccggaattaacggattgccaggtgaacaaggcgacgtcggtccacctggagctcct
ggattgcccggattggaaggtgaaatgggagcaccgggacatcctggaatccccggcgcc
aaaggggatcgcggtattccaggcgccgttggacttcctggtattcccggtgcgatcggc
gagaaaggcgatcgtggaccgcccgggccgacgatttcgatcaagggtgaaaaaggtgaa
ccgggtattcctggattgcgaggtgcgcctggagagaagggagatcgcgggttggaaggt
ctgagtggttacgagggtgaaaaaggggacagcggcgcgccgggtccggttggaaatcca
ggtccatccggcctccccggtgctaaaggagacgaaggtccacgcggacctacgggagtt
cctggattgacgatcaaaggcgagaaaggtttgccgggtatgcctggaaagcacggaagg
gaaggaataccgggacgaccgggagagaaaggggaacaaggattgccgggtttaccggga
tacaagggagaacgggggccgccgggtccgatcgggttacagggtgaaaaaggtgatatg
ggtcttatgggtcctcctggtttaacgggccgcgatgggcaaccaggagccaaaggattc
cccggtttgccgggtgagagaggcgagaaaggagacgctggtttacgaggaccacccggt
cccattggacaaaagggagaacctggattccctggaccgagcggaatagatggaattccc
ggtgaaaagggcgatagaggttgggatggtgtgagcgggctgcctggtccggtcggagag
aaaggcgacagagggtatcctggtccggtaggattaatgggtgtcgttggacacgtcggt
cagaaaggagacaagggtgacgactgcatcgagccaccgatgggaccgaaaggagatcgc
ggtttccctggaccggtcggcccgccaggtccaccgggagagaaaggaattccaggtccg
ccaggattcccgggatcgaacggagtgaaaggtgcgatagggtttcaaggacagccagga
cctgtcggtttgccaggtttaccgggacctgtcggtgcgcctggtttgccgggtcttcaa
ggaccggtcggtgttccgggtattcctggagaaccagggctaccgtgcgagcctgcatcc
gactatcttaccggtatcctgttggtgaaacacagtcaaagtcaattattgcctgcttgc
gacgcgggacacatcaaactttgggaaggatacagtctgctgttcacggatggcgatgaa
agggcgcactcgcaagatttaggttatgccggttcgtgcgtacgaaagttctcgacgatg
ccgttcctcttttgcgatataaacaacgtttgccactacggtaaccggggcgatcgttct
tattggttatccaccactagtccaattcccatgatgcctgtccaggagtcagagatagaa
caatacatctccagatgcgtggtgtgcgaggttccggcaaatgtgttggccgtacacagt
caatcgttgaatattccagattgtccacaaggatggactggactttggatcggatatagt
tttctcatgcacacgggtgctggtgcccagggtggagggcaatccttgtccagttccgga
tcctgtctggaagacttccgtgcaacgccgttcatcgagtgcaatggtaataaaggacag
tgtcattattacatgaacgagataagtttctggatggccacgatcgaggacagacaacag
ttccaagcgcctgagcaacagaccttgaaagcaggaaatctcagatccaaaataagtcgc
tgccaagtgtgtataaagaacacgtaa
DBGET
integrated database retrieval system