Apis cerana (Asiatic honeybee): 108000027
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Entry
108000027 CDS
T07475
Name
(RefSeq) probable DNA mismatch repair protein Msh6
KO
K08737
DNA mismatch repair protein MSH6
Organism
acer
Apis cerana (Asiatic honeybee)
Pathway
acer03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
acer00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
108000027
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
acer03400
]
108000027
DNA repair and recombination proteins [BR:
acer03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
108000027
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
Motif
Other DBs
NCBI-GeneID:
108000027
NCBI-ProteinID:
XP_016915644
LinkDB
All DBs
Position
Unknown
AA seq
1129 aa
AA seq
DB search
MSKVNTLYNYFTSPKTPKTPKQSNNKQISDEKPTTPKRARGQLNKVKTPSKGKENKNLED
RKRIYKDDEEEEKEKSEPIQTKKRRLIIPDEESGEDSGDEFKPDLDDESEESDSVSEGVS
ESEPPTASEEESPEKKRKLVNSIGKKSQKGAKKNFKEDKKESKLQQQNQSQGSNNVIDSW
PHLKYDFLQPNKIRDINKKSPNDSNYDPKTLYVPLDFLNQQTPAMRQWWELKSKHFDCVL
FFKLGKFYELYHMDAVIGVNELHLTYMRGEFAHSGFPEIGYGRFSASLIERGYKVARVEQ
TENPDMMAQRVSNMIRPTKFDKVVKREICQITSKGTRVYTPQDIEPSTPNSNYLLSVIEK
CPSGSNISHYGVCFLDTTIGDFYLGQFEDDRCNSRLLTLLAHYPPVHVVYERGNLSQKTL
QIFNNNLAACIKESLLRESQFWSSSTTLKNLHEGDYFKKSNSEFQWPTGLQSYLSKSDSL
GLTPAEDKELAVHALGGCIYLLKEYLLEQQLLAQGRFKTYVPPDFSNKTFEASKFANNMV
LDAITINNLRIFGEGSLIKTLDRCCTAFGKRLLREWICRPSCRKDVIIERQEAIQELIDH
SEAVQTTRSILAGLPDLERLLSKIHAQGNPAKQNNHPDGRAIMFEGQTYSKKRIIDFITT
LNGFEDVLKIIALFEDFCSTLISKCTKVEPDGEFPSLRESLDYFKTAFDHEEAKKVGCIV
PKKGVDSEYDSVLMELEEIKKDSEQYLEKQKKHFGVKITFHGSDKKRYQIEIPDSQTKKV
GAGFELQSQRKGYKRYYTAESKELLSRQINAEEHRDKVLKDLNRRIFAQFSEKYDMWSMA
VYKLSVLDVLISLTEYAFSGDMCVPEINDGTNEKIFIDIRDGRHPCIISDTFIPNDTLLA
TENFAPFMILTGPNMGGKSTLMRQVALLTIMAQIGSYVPASSCRLTLVDRIFTRLGANDD
ILAGQSTFLVELSETSAILQHATPYSLVLLDELGRGTSTYDGTAIAAAVVNALTKLNCRT
LFSTHYHSLVEDYKNNKKITLAHMACMVENEEQDKVSQETVTFLYKLSEGACPKSYGFNA
ARLGGVPAIITSRAHEISKKLEQETNRKHFFTILCKANGSTIRDLIAAM
NT seq
3390 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaagtgaatacattatataattattttacatcgcctaaaactcctaaaacacct
aaacaatcaaataataaacagatatctgatgaaaaacctacaacaccgaaaagagcaagg
ggacaattgaacaaagttaaaactccaagtaaaggcaaagaaaataaaaatcttgaagat
agaaaaagaatatacaaagatgatgaagaagaagaaaaggaaaaaagtgaaccaattcaa
acaaaaaagcgaagattaattattcctgatgaagaatctggagaagattctggagatgaa
tttaagcctgacctagatgatgaatcagaagaatctgattcagtatctgaaggagttagt
gaaagtgaaccaccaaccgcaagtgaagaagaaagtccagagaagaaacggaaacttgtt
aattctattggaaaaaaatcgcaaaaaggtgcaaaaaaaaatttcaaagaagataaaaaa
gaatcaaaacttcaacaacaaaatcaatcccaaggttcaaataatgttatagattcttgg
ccacatttaaagtatgattttcttcaaccaaataaaatacgagatattaataaaaaatca
ccaaatgattcaaattatgatcctaaaactctatatgttcctttggattttttgaatcaa
caaactccagctatgagacaatggtgggaattgaaaagtaaacactttgattgtgttctt
ttctttaaactaggaaaattttatgaattatatcatatggatgctgtaataggtgttaat
gaacttcatcttacctatatgagaggagaatttgcacattcgggatttcctgaaattgga
tatggccgtttttcagcgagtctcatagaaagaggatacaaagtggcaagagtagaacaa
accgagaatccagatatgatggcacaacgagttagcaatatgattagaccaacaaaattt
gataaagtagttaaaagagaaatttgtcaaataacttctaaaggtacaagagtgtacact
ccacaagatatagaaccatctacaccgaattctaattatttattatcagtgattgaaaaa
tgcccatctggttctaacatatctcattatggagtctgtttcttagatactacaatagga
gatttctatcttggtcaatttgaagatgatcgatgtaattctagattattaactttactc
gctcattatcctccagttcatgttgtttatgaacgtggtaatttgtctcaaaaaacgtta
caaatttttaacaataatttagcagcgtgtattaaagaatcacttttacgcgaatctcaa
ttttggtcatcttcaactacattaaaaaatcttcatgaaggagattattttaaaaaatca
aattccgagtttcaatggcctacaggcttacaatcatatcttagtaaaagtgatagttta
ggtttaactcctgctgaagataaagaattagcagtacatgctttaggtggatgtatatat
ttactcaaagaatatctacttgaacaacaattattggcacaaggacgttttaaaacatat
gttcctccagatttttcaaataaaacatttgaagcttccaaatttgcaaataatatggtt
ttagatgctatcacgattaataatttgagaattttcggggaaggttctcttataaaaacg
ctagatcgttgttgtaccgcatttggaaaaagattgttgcgagaatggatttgtagacca
tcttgccgaaaagatgttataattgaacgtcaagaagctatacaagaattaatagatcat
tcagaagcagtacaaactactcgtagtatattagcagggcttcctgatcttgaaagatta
ttgagcaagattcatgctcaaggaaatccagcaaaacaaaataatcatcctgatggcaga
gctatcatgtttgaggggcaaacgtattcaaagaaaagaattatagattttattaccact
ttgaatggttttgaagatgtcttaaaaataattgctttgtttgaagatttctgtagcact
ttaataagcaaatgtactaaagtggaaccggatggtgaatttccttcattaagagaatct
ttagattattttaagactgcattcgaccatgaagaagccaaaaaagtaggctgtattgtt
ccaaagaaaggagtcgattctgaatatgattccgttttaatggaacttgaggaaataaag
aaagattcagaacaatatcttgaaaagcaaaaaaaacactttggcgtgaaaatcacgttt
cacggttcagataaaaagcgttatcagatcgagattccagattctcaaacgaaaaaagtt
ggtgctggatttgaacttcaatcacaaagaaaaggatacaaacgttattacactgcagag
tcaaaggaacttttaagtcgacaaataaatgctgaagaacatagagataaagtattgaag
gatttaaatagaagaatatttgcacaatttagcgaaaaatatgatatgtggagtatggca
gtttataaattgtctgttctagatgttcttatttctttaacagaatatgctttcagtggt
gatatgtgtgtaccggaaattaatgatggtacaaatgaaaagatatttattgatattcga
gatggacgacatccatgtattatttcagatacatttataccaaatgatactttattagca
actgagaatttcgctccttttatgattctcactggaccaaatatgggcggtaaatcaaca
ttgatgcgtcaggttgcgcttctcactataatggcacaaattggaagttatgttcctgca
agttcctgtcgtttaacattagtagatcgtattttcacgagattgggagcaaatgatgat
attttagctggtcagagtacatttttagtagaattaagcgaaacttctgcaatattacaa
catgctacaccatattctctcgtattactcgatgaattaggacgtggtacatcaacgtat
gatggtacggcaattgctgctgcagttgtaaatgcacttacaaaattaaattgtcgtact
ttattttcgacgcattatcattctttggtagaagattataaaaataataagaaaattaca
ttagctcatatggcatgcatggttgaaaatgaggaacaagataaagtatctcaagaaaca
gtaacatttttatacaaactcagtgaaggagcttgtccgaaatcatatggtttcaacgct
gcccgattaggtggtgttccagctataattacaagtagagcacatgagatttcaaagaaa
ctcgaacaagaaacaaatcgaaaacacttctttactattttatgtaaagcgaatggttca
actataagggatctaattgctgcaatgtga
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