Apis cerana (Asiatic honeybee): 108000041
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Entry
108000041 CDS
T07475
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16
KO
K12815
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX38/PRP16 [EC:
5.6.2.6
]
Organism
acer
Apis cerana (Asiatic honeybee)
Pathway
acer03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
acer00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108000041
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
acer03041
]
108000041
Enzymes [BR:
acer01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
108000041
Spliceosome [BR:
acer03041
]
Complex C
Other components
Step II factors
108000041
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_N
HA2_C
DEAD
AAA_22
AAA_19
nSTAND3
Flavi_DEAD
ResIII
T2SSE
ATPase_2
AAA_30
AAA_16
AAA_24
ATPase
Sigma54_activ_2
PhoH
NB-ARC
Sigma54_activat
AAA_7
cobW
ABC_tran
AAA_23
Motif
Other DBs
NCBI-GeneID:
108000041
NCBI-ProteinID:
XP_016915667
LinkDB
All DBs
Position
Unknown
AA seq
1137 aa
AA seq
DB search
MDTSNDSNVYRLEGTDKNQVGGLIIRKKSSDHTFKKPQVSVLGLDKLAKRKRQENLQENN
LKSNSNSPKSEVKERKYRSYAEETPTHTGGVNSEAQQRLEARLKHQRLSAQDKHHKHNYR
DRDRHRDRERSRSRDSVRDSNRQTPLRFKDEPQTPIFKTKDSTSRSNWDDDEDEEPRKSS
WDHPTPNIYNSKDGRDSIRSEFTPSYKYNSWNRDRKASGATPSIEGEEKELWEEEQQRLD
REWYGLDDGENHAFADVSEEYTRKKEMELEAKRQKRLSAQQRQINKDNELWERNRMLTSG
VVSSLDHDDDPDDEGETRVHLLVHNVVPPFLDGRIVFTKQPEPVVPVRDPTSDMALVARK
GSALVRAYREQKERKRAQKKHWELAGTHIGNIMGVRDRHKDDREDPGQETDFKAGQKYAR
HIRSDEVTGEAKYRSIQYQRRSLPVFAVRQELLNVIRENSVVVIVGETGSGKTTQLTQYL
HEDGYSHYGIIGCTQPRRVAAMSVAKRVSDEMATTLGDKVGYAIRFEDCTSKDTVIKYMT
DGILLRESLREGDLDRYSVIIMDEAHERSLSTDVLFGLLREVVARRHDLKLIVTSATMDS
SKFSAFFGNAATFQIPGRTFPVEVLHAKNPVEDYVDAAVKQVLQIHLQPRSGDVLVFMPG
QEDIEVTCEALKERLAEIESAPPLSILPIYSQLPSDLQAKIFQRSEGGLRKCVVATNIAE
TSLTVDGIVFVVDSGYCKLKVYNPRIGMDALQVYPVSRANADQRAGRAGRTGPGTCYRLY
TRRQYLDELLLTGVPEIQRTNLANTVLLLKSLGVQDLLAFHFMDPPPQDNILNSLYQLWI
LGALDHTGRLTPLGRQMAEFPLDPPQCQMLIVASQLGCTADILIIVSMLSVPSIFYRPKG
REEDSDSAREKFQVPESDHLTYLNVYNQWKANGYSSSWCNDHFIHAKAMRKVREVRQQLE
EILKQQKMEVVSCGTDWDIVRKCICSAYFHQAARLKGIGEYVNCRTGMPCHLHPTSALFG
MGFTPDYVVYHELVMTAKEYMQCVTAVDGHWLAELGPMFFSVKETGRSGRAKRRQAMQHL
HEMEGQMKEAEEEMKARAQEQLEREQASIRKKEILTPGIREPGTPAPYRKTPSRLGL
NT seq
3414 nt
NT seq
+upstream
nt +downstream
nt
atggatacatcaaatgattcaaatgtgtataggttagaaggaactgataaaaatcaagta
ggaggtttaattattcgaaaaaagtcttctgatcatacatttaaaaaacctcaagtatct
gttttgggtcttgataagcttgcaaaacgaaaaagacaagaaaatttgcaagaaaataac
ttaaaatctaattcaaattcaccaaagtcagaagttaaagaaagaaaatatcgatcttat
gctgaagaaactccaactcatactggaggagtgaattctgaagcacaacaaagattagaa
gcgcgattaaaacatcaaagattaagtgcacaggacaaacatcataaacataattataga
gatagagataggcatagagatagagaaaggagtagaagtagagatagtgttagagatagt
aatagacaaacacctttaagatttaaagatgaaccacaaactccaatatttaaaacaaaa
gattcaacatccagaagcaattgggatgatgatgaagatgaagagccaagaaaatccagt
tgggatcatccgacacctaatatttataatagtaaagatggtagagatagtattagaagt
gaatttacaccttcatataaatataattcatggaatagagatcgaaaagctagtggtgct
acacctagtattgagggagaggaaaaagaattatgggaagaagaacaacaaagattagac
agagaatggtatggtttagatgatggagaaaatcatgcatttgctgatgtatctgaagaa
tatacacgtaaaaaagaaatggagctagaagcaaagagacaaaaacgtctttcagcacaa
caaagacaaattaacaaggataatgaattatgggaacgcaatagaatgttaacatctggt
gttgtaagttctttagatcatgatgatgatcctgatgatgaaggggaaactagagtacat
ctcttagttcataatgttgttccaccatttttagatggtcgaattgtatttactaaacaa
ccagaacctgttgtacctgtgcgtgatcctacttctgatatggctcttgtagcaagaaaa
ggatcagctttagtacgtgcatatcgtgaacaaaaagaaagaaaaagagcacaaaaaaaa
cattgggaattagctggaactcatattggtaatattatgggagtacgtgatagacataaa
gatgatagagaagatccaggacaagaaactgattttaaagctggtcaaaaatatgctcgt
catatacgaagtgatgaagttactggagaagctaaatacagatctattcaatatcaaaga
agaagtcttccagtatttgcagtacgacaagaattattaaatgtaattagagaaaatagt
gtcgtagttattgttggagaaactggaagtggaaaaactacacaattaactcaatatctt
catgaagatggttatagtcattatggtataattggatgtacgcaacctcgaagagtagct
gctatgtctgtggcaaaaagagtttctgatgaaatggctactactttaggagataaagtt
ggttatgctattcgttttgaagattgcacttcaaaagatactgttattaaatatatgact
gatggtattttattaagagaaagtttaagagaaggggatttagatcggtatagtgtaatc
attatggatgaagctcatgaaagatctttatccactgatgttttatttggtttactaaga
gaggttgtagctcgacggcatgatttgaaattaatcgtaacatctgctacaatggattct
agcaaattttcagcatttttcggaaatgctgcaacattccaaattccaggtcgtacattt
ccagttgaagtattacatgcaaaaaatccagtagaagattatgtcgatgctgcagtaaaa
caagtgttacaaattcatttacaacctcgatccggcgatgtattagtatttatgcccggt
caagaagatattgaagttacttgtgaagctttaaaagaacgtttagcagaaatcgaatca
gctcctccactttctattttacctatttattcgcaattgccttcagatttacaagctaaa
atttttcaacgttcagaaggaggtttacgaaaatgtgttgtagcaacaaatatagctgaa
acttctttaactgttgatggaattgtatttgttgtcgactcaggatattgcaaattgaaa
gtttataatccacgaattggtatggatgctttacaagtatatcctgtatctagagctaat
gctgatcaaagagcaggaagagcaggacgtactggtcctggtacttgttatagattatat
acacgaagacaatatttagatgaattattattaactggcgttccggaaatacaacgaacc
aatttagcaaatactgttttattattgaagtctttaggtgtccaggatttattggccttt
cattttatggatccaccaccacaagataatatattaaattctctatatcaattatggatt
ttgggtgcattagatcatacaggacgtttaacgcctttaggacgacaaatggctgagttt
ccattagatccacctcaatgtcaaatgctcattgttgcttctcaacttggttgtactgca
gatatacttattatagtttctatgttatcagtgccttcgatattttatcgaccaaaaggt
cgcgaagaagattccgattcagctagagaaaaatttcaagtaccagaatctgatcattta
acatatcttaatgtatacaatcaatggaaagcaaatggttattccagttcttggtgtaat
gatcattttatccatgcaaaagctatgcgtaaagtcagagaagttcgacaacaacttgaa
gaaattttaaaacaacaaaaaatggaagttgtaagttgtggtactgattgggatattgta
cgaaaatgtatttgttcagcatatttccatcaagcagcccgtttaaaaggtattggtgaa
tatgtaaattgtcgtactggaatgccgtgccatttacatccaacatcagctttgttcgga
atgggcttcacaccagattatgtagtgtatcatgaacttgtaatgactgctaaggaatac
atgcaatgcgtaactgctgttgatggccactggttggcagaattaggtcctatgttcttt
agcgttaaagaaactggacgaagtggacgagcaaagagacggcaagctatgcaacattta
cacgaaatggaaggacaaatgaaagaagcagaagaagaaatgaaagctcgagcgcaagaa
caacttgaacgtgaacaagcttcaatcagaaaaaaagagatattaacaccaggtattaga
gaaccaggaacacctgctccttatcgaaaaactccaagtagattgggattataa
DBGET
integrated database retrieval system
