Apis cerana (Asiatic honeybee): 108000358
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Entry
108000358 CDS
T07475
Name
(RefSeq) exosome component 10
KO
K12591
exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
acer
Apis cerana (Asiatic honeybee)
Pathway
acer03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
acer00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
108000358
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acer03019
]
108000358
Messenger RNA biogenesis [BR:
acer03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
108000358
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_A_exo1
PMC2NT
HRDC
Motif
Other DBs
NCBI-GeneID:
108000358
NCBI-ProteinID:
XP_028523722
LinkDB
All DBs
Position
Unknown
AA seq
871 aa
AA seq
DB search
MDPTEDWSGNCQIENETQKNENKEINQVIPGYASFHDYVQEAFHVMKLGIKNANNLPTGS
NFNYYSCFPSFRKNKDDNIKLLLNVVQHVLGITGVKNNISNRDIEEKFDLLLEANDVLLD
RANALMDKECGITKNSEVEVVVSHLKSQPINGGWNNQICQPLQISENVQSIRLLAGKNIQ
RPQLMFKDKIDNSSKPWCPRIKDKPNSLKPLAIYLEESENGEVFNHPYEYELNMFVPPND
QLKKSEPTKYKNLEDTLLVMIKDPSDIKLLINDLKQYKEIAVDLEHHSYRSFQGITCLMQ
ISTEDKDYLIDTLSLRSELHELNEIFTKSTILKVFHGADLDIQWLQRDLSLYVVNMFDTH
QAAKQLNLPYLSLAYLLKHYCNVDPDKHFQMADWRIRPLPEKLIKYAREDTHYLLYIKDM
LKNALIDVANGQINILKVVYDRSTEICKKTYVKPIWTEENCMTMYRKSQKMFNNKQLYAL
RELHKWRDDTARIEDDSIAYVLPNHMLLNIAETLPREMQGILACCDSIPPLVRQNLLKLH
KIILKAREQPLIKPILEEDIRQRLTQRNHHTNLDVWMYSPHDIPSDMEARADLPCLLDKN
NVLETPISNIAIKHTVTVFDSPTTSEDEEVGKTEQESAKKKKFVFVSPFERYKRVIPMIA
EQEAQEREKEKQEEENRLNKLKKEETEIVESKNRVYEHFKQVSQMITGKNESELSKKPSQ
TPLSQMPGRKRKRDSNINKQDEVQEEKTNDNLSTPVPILETRIIQDLKKDINEVEHLKEE
QNVQESGTKKQKQIPNNETMNLLRSRKKGERKRIIKDLEKKGMMPSKKFDYKIVDFSAFQ
GGSQNIPNQVQFEQTMVRMFILFYYHLMNLY
NT seq
2616 nt
NT seq
+upstream
nt +downstream
nt
atggatcctacagaagattggagtggtaattgccaaatagaaaatgaaactcaaaaaaat
gaaaataaagaaattaatcaagttatacctggatatgcaagttttcatgattacgttcaa
gaagcattccatgttatgaaacttgggatcaaaaatgctaataatttaccaacgggatct
aatttcaattattactcatgttttcctagttttcggaaaaataaagatgacaatataaaa
ttattattaaatgttgtgcaacatgtattgggaattactggtgtaaaaaataatatttca
aatcgggacattgaagaaaaatttgatcttttattagaagcaaatgatgtgctactggat
cgagctaatgctttaatggacaaagaatgtggtattaccaaaaattcagaagtagaagtt
gtagtttcacatttaaaaagtcaaccaatcaatggtggatggaacaatcaaatttgtcaa
ccattgcaaatttcagagaatgttcaatctatacgcttattggctggtaaaaacattcaa
agaccacagctaatgttcaaagataaaattgacaatagttcaaaaccttggtgtccaagg
attaaagataaacctaattctttaaaaccattagctatttatttggaagaaagtgaaaat
ggtgaagtgtttaatcatccttatgaatatgaactgaatatgttcgttcctcccaatgat
caattgaaaaaatctgaaccaacaaaatataagaatttggaagatacattattagtaatg
attaaagatccatcagatattaagttattaataaatgatctaaaacaatataaggaaatc
gctgtagatttagaacatcattcttatagaagttttcaagggataacttgtttgatgcaa
atctcgacagaagataaagattatttgatagatactttatcattgagatctgaattacat
gagttaaatgaaatttttacaaaatcaacgatattaaaagtttttcatggagcagattta
gatatacaatggcttcaaagagatttatctttatatgtagtgaatatgtttgatacacat
caagcggcaaaacaacttaatctgccatatttaagtttagcatatttattgaaacattat
tgtaatgtagatcctgataaacattttcaaatggctgattggcgcataagacctttacca
gaaaaacttattaaatatgctagagaggatacacattatttattgtacataaaggatatg
ttaaaaaatgctttaattgatgtagctaatggacaaattaatattttgaaagttgtatat
gatagaagtacggagatttgtaaaaagacatatgttaaaccaatttggacagaagaaaat
tgtatgacaatgtacagaaaaagtcagaaaatgtttaataataaacaactttatgcttta
agagaattacataaatggagagatgatacagctagaatagaagatgatagtattgcttat
gtattaccaaatcatatgttgttaaacatagctgaaacattacctcgtgaaatgcaagga
attttagcatgctgtgattctattcctcctttggttagacagaatttattaaaattacac
aaaataatattgaaggctagagagcagccacttattaaaccaattcttgaagaagatatt
agacaaagattaacacaaaggaatcatcatactaatttagatgtatggatgtattcccct
catgatattcctagtgatatggaagcaagagctgatttaccatgtttattagataaaaat
aatgtattagaaacaccaatttcaaatattgcaataaaacatacagtgactgtatttgac
agtccaacaacatccgaggatgaagaagttggaaaaactgagcaggaaagcgctaaaaag
aaaaaatttgtttttgtaagtccatttgaacgatataaacgagttatacctatgatagca
gagcaagaagcacaagagagagagaaagaaaaacaagaagaagaaaatcgtttaaataaa
ttaaaaaaggaagaaacagaaattgtagaaagcaaaaacagagtttatgaacactttaaa
caagtttcccaaatgataacaggaaaaaatgaatcagaattatcaaaaaaaccatctcaa
actccattaagtcaaatgccgggacgtaaaagaaaaagagattcaaatattaataaacaa
gatgaagtacaagaagaaaaaactaatgataatttatcaactccagttccgatattagag
acgagaattattcaagatctgaaaaaagatataaatgaagttgaacatttgaaagaagaa
caaaatgtacaagaaagtggaacaaaaaaacagaaacaaattccaaataatgaaactatg
aatttgttgcgatcaagaaagaaaggagaaagaaaacgtataattaaagatttggaaaag
aaaggcatgatgccatcaaaaaaattcgattataaaatcgtagattttagtgcttttcaa
ggaggtagtcaaaacatacccaatcaagtacaatttgaacaaacaatggtaagaatgttt
atattattttattatcatttaatgaatttatattga
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