Apis cerana (Asiatic honeybee): 108002633
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Entry
108002633 CDS
T07475
Name
(RefSeq) ATP-dependent RNA helicase DDX42
KO
K12835
ATP-dependent RNA helicase DDX42 [EC:
5.6.2.7
]
Organism
acer
Apis cerana (Asiatic honeybee)
Pathway
acer03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
acer00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108002633
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
acer03041
]
108002633
Enzymes [BR:
acer01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
108002633
Spliceosome [BR:
acer03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
108002633
Complex B
108002633
Complex C
U2 SnRNP specific factors
108002633
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
MscL
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
108002633
NCBI-ProteinID:
XP_016919903
LinkDB
All DBs
Position
Unknown
AA seq
772 aa
AA seq
DB search
MSYHRGGGNKPKGFGFAGFQMTGTKRSGSNVPPPPPNSALSKQGYHTMNSITENALSACW
GMPKKRSKTEEEYFEDDDDPPPYSLEYIPAPGSPTYDWMKKSTPKEDSDSEEDPLDAFMA
GIDAEVKKNNYEAQLAEDERKEEKSKGFRADIDGEDDEESYYRYMEENPTAGLQQEESDQ
EIEYDEDGNPIAIPKKKEIDPLPPIDHSEIQYESFEKNFYNVHDEIANLNKQQVDDLRKT
LGIKVSGPSPPNPVTSFGHFGFDDALIKAIRKNEYTQPTPIQAQAVPAALSGRDIIGIAK
TGSGKTAAFIWPMLVHIMDQRELKEGDGPIGLILAPTRELSQQIYQEARKFGKVYNVQVC
CCYGGGSKWEQSKALEGGAEIVVATPGRIIDLVKMKATNLTRVTFLVLDEADRMFDMGFE
PQVRSICNHVRPDRQTLLFSATFKKRVEKLARDVLTDPVRIVQGDVGEANADVTQHVIVF
NNNPTGKWTWLLQNLIEFLSAGSLLIFVTKKLNAEELANNLKLKEFDVLLLHGDMDQIER
NKVITAFKKKEVSTLVATDVAARGLDIPHIRTVLNYDVARDIDTHTHRIGRTGRAGEKGT
AYTLVTEKDKEFAGHLVRNLEGANQEVPKSLMDLAMQSAWFRKSRFKGGKGKSLNVGGAG
LGFRGRPEPSSTSSCSSSSQGSKDISEVVKKLERHGPGSDRLSAMKAAFRSQYNSQFRAS
SDHTWEQTITRPSVIMPPPPPVPPKPNTEQSKTQDTQASGGERKRVRKSRWE
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
atgagttatcatcgtggagggggtaataagccaaaaggctttgggtttgccggctttcaa
atgactggcacaaagagaagtggttctaacgtaccaccacctccaccaaattctgctcta
agcaaacaaggctatcatactatgaattccatcactgaaaatgctttatctgcatgttgg
ggaatgccaaagaaacgtagcaaaaccgaggaagaatattttgaggatgacgatgatcct
ccaccatactccttggaatatattccggcgcctggatctcccacttatgattggatgaaa
aaatcaacaccaaaggaagatagcgatagtgaagaagatcctctagatgcatttatggct
ggtatagatgcggaagttaaaaaaaataattacgaagctcaactggctgaagatgaacga
aaagaagagaaatctaaaggattcagagcggatattgatggtgaggacgatgaagagagt
tattacaggtatatggaggaaaatccaaccgcgggtttgcaacaagaggaatctgatcaa
gaaatcgaatacgacgaagacggaaatccaatcgcgattccaaaaaaaaaggagatagat
cctttaccacctatcgatcatagcgagatacaatacgaatctttcgagaaaaacttttat
aacgttcacgatgaaattgctaatttaaataagcaacaggttgacgatttaagaaaaact
ttaggaataaaagtatctggtccatctccgccaaatccggtcacgagtttcggtcatttt
ggttttgatgatgcgttgataaaagctattagaaaaaacgaatatactcaacctactcct
atccaagctcaagcagttcctgccgcactgagcggcagagatataataggtatagcaaaa
actggtagtggcaaaacagcagcttttatttggccaatgttagttcacattatggatcaa
agagaattaaaggaaggtgacggacctatcggtttgattcttgctcctacaagagaattg
tcacaacaaatttaccaagaagcaagaaaatttggaaaagtgtataatgttcaagtatgc
tgttgctatggcggaggtagcaaatgggaacaaagtaaagcattggaaggaggtgcagag
atagtagtcgcaacaccgggtagaataatagatttagttaaaatgaaggctacaaatttg
accagagtaacatttttagtattggatgaagctgatagaatgtttgatatgggttttgag
ccgcaagtgcgttctatatgtaatcatgtaaggccagacaggcaaacattattgttcagt
gcaactttcaaaaagagggtagaaaagcttgctagggacgttttaacggatccagttagg
atagtccaaggggacgtcggtgaagcgaatgccgacgtcacgcaacacgtgatagtgttc
aataataatccaaccggtaaatggacatggttattgcaaaatctgattgaatttttaagc
gctggtagtttattaattttcgtaactaaaaagctcaatgctgaagaacttgcgaataat
cttaaattaaaagaatttgatgttttacttttgcatggagatatggatcaaattgaaaga
aacaaagtaataacggcttttaaaaaaaaagaagtcagtacattagttgctactgatgtt
gccgctcgaggtttggacattccacatatcagaaccgttctcaattacgatgtcgctaga
gatatcgatactcatacgcatagaataggtagaacaggtagagcaggtgaaaaaggaaca
gcatatactcttgtaacagaaaaagacaaagaatttgctggtcatttagttcgaaatttg
gagggtgcgaatcaagaagtaccaaagagccttatggatttagcaatgcaaagtgcttgg
tttcgcaaatcaagatttaaaggtggaaaaggaaagagtttgaatgttggaggagctgga
cttggatttaggggaagaccagaaccttcttcgacatcgagttgcagttcctcgtcacaa
ggatcgaaggatataagcgaagttgttaaaaaattagaaagacacggaccaggtagtgat
cggttatcagctatgaaagctgcattccgtagtcaatacaattctcaattccgggcatca
tcggatcacacgtgggaacaaactattacgcgaccttcagtgataatgcctccaccacct
cctgtacctccaaagccaaatacggaacaatcaaaaactcaggatacacaagcttccgga
ggagaaagaaagagagtgagaaaaagtcgatgggaatga
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