Acetobacter sp. JWB: DS739_01345
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Entry
DS739_01345 CDS
T05544
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
acet
Acetobacter sp. JWB
Pathway
acet03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
acet00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
DS739_01345
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
acet03400
]
DS739_01345
DNA repair and recombination proteins [BR:
acet03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DS739_01345
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
DS739_01345
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
DEAD
UVR
AAA_30
UB2H
AAA_22
DUF87
Kinesin
Motif
Other DBs
NCBI-ProteinID:
AXC25564
LinkDB
All DBs
Position
275347..277596
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AA seq
749 aa
AA seq
DB search
MASKTSSSAARGKKRPSLSERAASLPPVLFEPEKQAPRPRLKRMEVVSEYEPAGDQPQAI
RELVAGVEAGERDQVLLGVTGSGKTFSMAKIIEATQKPTLILAPNKTLAAQLYGEMKQFF
PNNAVEYFVSYYDYYQPEAYVPRSDTYIEKDSQINEQIDRMRHAATQALLERNDVIIVAS
VSCIYGIGSVETYSRMVVKLELGGEIDRDKLIKSLVELQYRRNDAAFARGTFRVRGETID
IFPVQNEDRAWRVSLFGDEVDGLIEFDPLTGEKTADLQEITIYANSHYVTPRPTLNQAIK
GIKQELREQLDVFTKAGKLLEAERLDQRTTFDLEMLETTGVCKGIENYSRYLSGRKPGDP
PPTLFEYLPEDALLIVDESHVTVPQIGGMERGDHARKSVLAEFGFRLPSCLDNRPLNFAE
WDKFRPQSLFVSATPGPWEMERTGGVFAEQVIRPTGLVDPITIIRPVEHQVDDLLAECRT
TIAKGGRVLVTTLTKRMAEDLTDYMNEAGIRVRYLHSDVDTLERIEIIRDLRMGAFDVLI
GINLLREGLDIPECALVAILDADKEGFLRSRTSLIQTIGRAARNVEGRVLLYADKMTDSL
TYAVEETARRREKQMAWNTEHGITPQSVRKHISDIVSSVFEQDYVTIAPDEDTGVAEFVG
QDLGAAIAGLEKRMRSAAAELEFETAARLRDEIQRLEALQLGLEPPPVAASTAGKAQTSG
RKPKKDKVPRPLGPGGGGYDPAARRKKRK
NT seq
2250 nt
NT seq
+upstream
nt +downstream
nt
atggcttccaaaacctcctcctctgcggcacgtggcaaaaagcgcccttcattaagcgag
cgtgcggccagtcttccccccgttctgttcgagccggaaaaacaggctcctcgtccacgc
ctcaagcgtatggaagtggtgtcagaatacgaaccggcaggggatcagccgcaggctatt
cgtgaacttgtggccggggtagaagctggagagcgcgatcaggttctgttaggggttacg
ggttcgggtaaaaccttttccatggccaagattattgaggccacgcaaaaacccacactt
attcttgcgcccaacaagacattagctgcgcagctttatggagaaatgaagcagtttttc
cctaataatgctgtggaatattttgtaagttattatgattactatcagccagaagcctat
gtgccgcgttctgatacgtatattgaaaaagacagccagataaacgaacagattgaccgt
atgcgccatgcggctacgcaggcgctgctggagcggaacgatgtaattatcgtggcttct
gtttcctgcatttacggtattgggtctgtggaaacctattcccgcatggtggtgaagctg
gagctgggcggagagatagaccgggataagcttataaaaagccttgttgaattacagtac
cgtcggaacgatgccgcatttgcacgcggtacattccgggtgcgtggtgaaacaatagac
atttttcccgtgcagaatgaagacagggcctggcgtgtttctctgtttggcgatgaagtt
gacgggttaatagaatttgacccgctaacgggtgaaaaaacggctgatctgcaggaaatt
acaatttacgcaaatagtcactacgttacaccacgtccgacgttgaatcaggccattaag
ggcatcaagcaggaactgcgcgaacagcttgatgtgtttacaaaggccggtaagttgctg
gaagcagaacggctggaccaacgcaccacttttgatctggaaatgctggaaacaacaggg
gtgtgtaaggggatcgaaaactactcccgctatctttctggtcgcaaaccgggtgatcca
ccaccaaccctgtttgaatatctgcctgaagatgcgctgctgattgtagatgaaagccac
gtaacagtgccgcagattggcggcatggaacgcggagaccatgcgcgcaaatccgtgctg
gcagagtttggtttccggcttccttcctgcctggataaccggcctttgaattttgcggag
tgggacaagtttcgcccacaaagcctttttgtaagtgccacacccggcccatgggaaatg
gaacgcacaggtggcgtgtttgctgaacaggttattcgccccaccgggttggtggacccc
attacaattattcggcctgtagaacatcaggtggatgatctgttggcagaatgtcgtacc
accattgccaaaggtggccgtgtgttggtgacaacacttactaaacgcatggcggaagac
ttaaccgattacatgaatgaagctggtattcgggtaaggtatctgcattccgatgtagat
acactggaacggatagaaattatccgagacctgcgcatgggagcatttgatgttctcatc
ggcattaacttgctgcgagaaggtttggatattccagagtgtgcgcttgtagctattctg
gatgcagataaggaagggttcttgcgttcccgcacatctcttatccagactattggccgt
gcggcccgaaatgtagagggccgggttctgctgtatgcagataaaatgacggattctctg
acatacgcagtagaggaaacagcccgcaggcgcgaaaaacagatggcgtggaatacagag
cacggcattacgccacaaagtgtgcgcaagcatattagtgatattgtgtcttctgtgttc
gaacaggattacgttaccattgcgccggatgaagatacgggcgtggcagagtttgtgggg
caggatctaggggccgctattgccgggttggaaaagcgtatgcgttctgccgcggcagag
ctggagtttgaaactgcggcacggttacgagatgaaattcagcggttggaagccttgcag
cttggactggaaccgcctccggtagcggcctcaacagcaggaaaagctcagacaagtggc
cgcaaacctaaaaaagataaggtgccacggccactagggccgggcgggggtggatatgat
ccggcagccaggcggaaaaagcggaaataa
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