Acetobacter sp. JWB: DS739_05470
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Entry
DS739_05470 CDS
T05544
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
acet
Acetobacter sp. JWB
Pathway
acet03420
Nucleotide excision repair
acet03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
acet00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
DS739_05470
03430 Mismatch repair
DS739_05470
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
acet03400
]
DS739_05470
Enzymes [BR:
acet01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DS739_05470
DNA repair and recombination proteins [BR:
acet03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DS739_05470
MMR (mismatch excision repair)
Other MMR factors
DS739_05470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
UvrD_C_2
PcrA_UvrD_tudor
Tudor_1_RapA
AAA_11
DUF3553
Motif
Other DBs
NCBI-ProteinID:
AXC26291
LinkDB
All DBs
Position
complement(1143920..1146271)
Genome browser
AA seq
783 aa
AA seq
DB search
MGCVSLYCKAAGLFLPFLLSRLSPHSIAPFGLKRTCLYKGMVNTSEHPSAPLFSSPSASG
DSYLARLNPEQRAAIETTDGPLLVLAGAGTGKTRVLTTRFAHILLTGRAKPWQILTVTFT
NKAAREMHERIGLLLGSPAEGLWLGTFHALCARMLRRHAEYVGLTQSFTILDTDDQLRLL
KQVMAPWQIDIKRWPAPGLLGVIQRWKDRGLTPERITPSEDSDFANGHARAIYTAYQARL
KQLNACDFGDLMLHVTEILRTRPDVLAQYHRLFRYILVDEYQDTNTIQYLWLRLLAKHAE
GPANICCVGDDDQSIYSWRGAEVENILRFEKDFPSAKVVRLERNYRSTRHILGAAAGLIA
HNSERLGKTLRPGREDAEGKKVSVLGVWDSDTEARMVCEQAEKLRAQGHALKEIAILVRA
GFQTRAFEERLMQTGLPYRIVGGLRFYERAEIRDALAYMRVLSQPADDLAFERIINVPKR
GVGPAGLQKLHAAARANSLPLTGGTEKLLEDNALKGKSAAHLRQLMEAFASTRDILAREG
HVVAVEHLLEESGYLDMWRQDRSPDAPGRLENLKELTRALADFRTLGEFLEHVALVMDHD
ENGQDDYLSIMTLHGAKGLEFDTVFLPGWEEGVFPSQRTLDEGGLKGLEEERRLAYVGIT
RARQEAIIFHAGRRRIYANWQPSMPSRFLDELPDEHVVRHDEGGTFQRQGLNLSESVFDN
GPIIARRRKDPMLEAAPALQLGDHVRHPRFGEGIVISADRHHVEVSFESVGTKRLLSSFI
EKI
NT seq
2352 nt
NT seq
+upstream
nt +downstream
nt
ttgggttgtgtcagcctttactgcaaagctgctgggctttttttgccttttctgctcagc
cgactgtctccccattccattgctccgtttggcctgaagcgcacatgcttatataaaggc
atggtgaatacgtccgaacacccctccgccccgcttttttcatctccgtctgcatcgggt
gacagttatctggctcgtcttaaccccgaacagcgcgctgctattgaaacaacggatggc
cctttgctggtgctggctggtgctggcacaggcaaaacacgggttttaaccacccgcttt
gcgcatatcctgctgacaggccgggccaagccatggcagatcctgacagtaacctttacc
aataaagctgcgcgagaaatgcatgagcgtattgggctgcttttgggcagtccggcagaa
gggctatggttaggcacatttcatgccctgtgtgcgcgtatgctgcgccgccatgccgaa
tatgtggggctcacacaaagctttacaattctggatacggatgaccagctgcgcctgctc
aaacaggttatggcaccgtggcagattgatatcaaacgctggcctgctcctggcctttta
ggcgttattcagcgctggaaagaccgcgggcttacaccagagcgcattaccccctccgag
gattcggactttgccaacggccacgcccgcgccatttacaccgcgtatcaggcccgcctg
aagcaactgaacgcctgcgattttggtgatctgatgctgcatgtaaccgaaattttgcgc
acacggcctgatgtgctggcacagtatcatcgcctgttccgttacattctggtggatgag
tatcaggataccaacaccattcaatacctctggctgcgtctgctggccaaacacgcagaa
ggcccagccaatatctgctgcgtgggggatgatgaccaatccatctactcatggcgtggt
gcagaagttgaaaacattctgcggtttgaaaaagattttccctccgccaaggttgtgcgg
ctagaacgcaattatcgctctacccggcatattctgggggctgccgcagggcttatcgcc
cataatagcgaacggttaggcaagacacttcgccctggcagagaagatgcagaaggtaaa
aaagttagcgttcttggtgtgtgggattcggatacagaagcccgcatggtatgcgaacag
gcagaaaaactacgcgcacaaggccacgctttaaaagaaatagccattctggtgcgtgcg
ggctttcaaacccgcgcgtttgaagaacggcttatgcaaactggcctaccctatcgcatt
gtaggtggcctgcgtttttatgaacgtgcagaaatacgtgatgcactggcctatatgcgc
gtgctaagccaaccggcggatgatctggcgtttgagcgtattatcaatgtacccaaacgc
ggcgttggccctgccgggttgcaaaagctgcatgctgctgcccgcgccaacagcctgccc
cttaccggcggcacggaaaagctgctggaagataacgcgcttaaaggaaaatccgccgcc
catttacgccagttgatggaagcctttgccagcacacgcgatattttagcgcgtgaaggc
catgtggtggctgttgaacacctgctggaagaaagcgggtatctggatatgtggcggcag
gatcgctcccccgatgcgccggggcggctggaaaacctgaaggaactgacacgtgcgctg
gctgattttagaacgctgggcgagtttttagaacacgttgcccttgtgatggatcatgat
gaaaacgggcaggatgattacctgtccatcatgaccctgcatggcgccaaagggcttgaa
ttcgatacagtctttctgcccgggtgggaggaaggtgtttttccctctcaacgcacgttg
gatgaaggtggcctgaaagggctggaggaagaacgcaggctggcttacgtgggcattaca
cgcgcacggcaggaagccattatctttcatgctggccgtcggcgtatttacgccaactgg
cagccttccatgcccagccgctttttagacgaactgccagatgaacacgtggttcgccat
gatgaaggcggtacgttccaacggcaaggccttaacctttccgaatccgtgtttgataac
ggccccattattgcccgccgcagaaaagaccccatgctggaagccgcaccggcactgcaa
ctaggtgaccatgtacgccacccccgctttggggaaggcatcgttatttcggcagatcgg
caccatgttgaagtgtcttttgaatctgtcggcaccaaacgtcttctttcatcctttatc
gagaaaatctaa
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