Acetobacter sp. JWB: DS739_06405
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Entry
DS739_06405 CDS
T05544
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
acet
Acetobacter sp. JWB
Pathway
acet03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
acet00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
DS739_06405
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
acet03400
]
DS739_06405
Enzymes [BR:
acet01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
DS739_06405
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
DS739_06405
DNA repair and recombination proteins [BR:
acet03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
DS739_06405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
NFACT_N
YibY
zf-FPG_IleRS
Motif
Other DBs
NCBI-ProteinID:
AXC26458
LinkDB
All DBs
Position
complement(1333999..1334838)
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AA seq
279 aa
AA seq
DB search
MPELPEVETVMRGMQIALQNGTIKEAIVRRHDLRWRIPADFSQTIEGRRIEGFRRRGKYI
LMRLSGGMSIIWHLGMSGRVLLDSPTTPLLHEHIVLILQNGKRCGYIDPRRFGMLDLVPT
DQEDTYPLLAGMGPEPLEPDFTPKTLLAASKNRRMPIKPFLLDQKVVAGLGNIYVCEALF
RAGIAPTMPACNLTTPKARKLAQAIRDVLEEAIEAGGSSLKDYVRPEGGLGYFQHAWRVY
GQTGKPCPNCPGTPACSGVQQITQAGRSTFFCPQRQKNG
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atgccggaactccctgaagtagaaaccgtaatgcgcgggatgcagattgccctgcaaaac
ggtaccatcaaagaagcaattgtgcgccgtcacgacctgagatggcggattcctgccgat
ttctcacaaacaatcgaaggccgccggatagaaggctttcgccgtcggggcaaatatatt
cttatgcgcctgtctggtggaatgtccataatctggcatttaggtatgtctgggcgcgtg
cttctcgattctccaaccacgccattattgcatgagcacattgtactgattctgcaaaat
ggaaagcgctgtggttacatagatccgcgccggtttggcatgctggatctggttccaacc
gatcaggaagatacctatccattgctggcaggcatggggccagagccgcttgagccagat
tttacccccaaaacgcttttggctgctagcaagaacaggcggatgcccattaaacctttc
ctgcttgatcagaaggttgtggcggggttaggcaatatttatgtgtgtgaagccctgttt
cgggctggcattgccccaaccatgccagcctgcaatcttaccacccccaaagcccgcaaa
ttggcgcaagccatacgtgatgtgctggaagaagccatagaggcaggtggttccagcctg
aaagattatgtacgcccagagggcgggttggggtatttccagcacgcatggcgggtatat
gggcaaacgggtaaaccatgccccaattgccccggcacacccgcatgttctggtgtgcag
cagataacgcaggccggacgatccacatttttttgtccccaaaggcagaaaaacgggtaa
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