Acetobacter sp. JWB: DS739_10115
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Entry
DS739_10115 CDS
T05544
Name
(GenBank) ribonuclease E/G
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
acet
Acetobacter sp. JWB
Pathway
acet03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
acet00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DS739_10115
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acet03019
]
DS739_10115
03009 Ribosome biogenesis [BR:
acet03009
]
DS739_10115
Enzymes [BR:
acet01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
DS739_10115
Messenger RNA biogenesis [BR:
acet03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
DS739_10115
Ribosome biogenesis [BR:
acet03009
]
Prokaryotic type
rRNA processing factors
DS739_10115
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
Motif
Other DBs
NCBI-ProteinID:
AXC27078
LinkDB
All DBs
Position
2144106..2147105
Genome browser
AA seq
999 aa
AA seq
DB search
MLIQGQLWKLCTPSNFYRTPVYIRRKSPCSVVPCHLHGSTTQAGHRRTGVFLFMSKRMLI
DATHAEETRVVVMDGNRLEDYDVESAAKKQLKGNIYLARVVRVEPSLQAAFVEYGGNRHG
FLAFSEIHPDYYQIPVSDREKLLALQAEEEALLENSENGSDEDDASDNAETQASDTEQDI
EASDTAAQNEGEGSEREERSANKPDAPDYVGGETDTGEEALIQKRIARFLRNYRIQEVIR
RRQVLLVQVVKEERGNKGAALTTYVSLAGRYCVLMPNALRGGGVSRKITSVADRRRLRDI
VSDLNLPRGMAMIVRTAGAQRPGPEITRDCEYLLHLWDDIREHTLQSVAPALIYEEASLV
KRAIRDVYTREISEIVVDGENGWKAARDFMRMLMPQHAEKVRLWNKENQPLFTHYHVEGH
LDAMFSPVVSLRSGGYLVINQTEALVAIDVNSGKATSQRNIEETAFRTNQEAADEVARQL
RLRDLAGLIVIDFIDMESRRHNSMIERRLKDALRHDRARIQIGSISHFGLLEMSRQRLRP
SVAEAAFMPCPHCNGTGMMRSIESSALHVLRAVEEEGARRRSSAITVHVAADIAFYILNN
KRDWLTQIEQRHQMEVLFAADNTLPAPEVRIERRQHARPPRIQPPLPPVENIVADEVAAA
TPEIPAAEPSSIQETADTSDEPRRRRRRRRRRRNDQDTNQVSETQTQPDTETPETAETAP
IAAPENAAEPVAEAEAETNLVPGRRRTRRSRVRKPTETRTEIHVDIEEGPAPRPNMPAWE
GPTPANPFGGAPDIFELLENTARQQAVDIAPAPKAANVQEEAASVPVEPAKTEEVAPQPV
MAAPEEPEKTEEAPKPRRRRTRKKVEPAAEENAEQAETSVAAPEAEAASTEAEAPKKPVR
RRATRRKTAAKDEATEAAEASTADTAEEKPKKTTRRRTTRKKAEPASTPEAASGSEAVAT
SAPKEAASEVSDKEEAIVQPIVIEDSPPATRRRTGWWKK
NT seq
3000 nt
NT seq
+upstream
nt +downstream
nt
atgctgatacaggggcagctatggaaactttgtacgccttccaatttttatcgcacgcct
gtttatatccgccggaagagcccctgctccgtcgtgccatgccacttacacggcagcacc
acacaggctggccaccggcgcaccggagtttttctttttatgtcaaagcgtatgctgatc
gacgcgacacacgcggaagaaacgcgtgttgttgtgatggacggaaatcggcttgaagat
tacgatgttgaatctgctgcaaaaaagcagcttaaagggaacatctaccttgcccgcgtt
gttcgcgtagagccaagcctgcaagccgcctttgtagaatatggcggcaaccgccacggc
tttctggcttttagcgaaatccatccggattactatcagatcccggtttctgaccgcgaa
aagctgctggcccttcaggcggaagaagaagctctgctggaaaacagcgaaaatggttct
gatgaagatgatgcatctgacaatgcagaaactcaggcatctgatacggaacaggatata
gaagcatctgacactgccgctcagaatgaaggcgaaggttctgaacgggaagaacgttct
gccaacaagccggatgctccggactacgtcggcggcgaaacagatacgggtgaagaagcc
cttattcaaaaacgcattgcccgattcctgcgtaactaccgtattcaggaagttatccgc
cgtcggcaggtgctgcttgtgcaggtggttaaggaagaacgtggcaacaagggcgcagcc
ctgaccacctatgtttctttggctggccgttactgtgtgcttatgcccaatgccctgcgt
ggtggtggcgtttcacgcaagattacatctgtggcagaccgccgccgcctgcgagatatt
gtttccgacctcaacctgccccgcggcatggccatgattgtgcgcactgctggcgcgcaa
cggcccggcccagaaattacgcgagactgcgaatatctgctccatctgtgggatgatatc
cgcgaacatacgcttcaatccgtggcccccgcactgatttacgaagaagcgagcttggta
aaacgcgctatccgcgatgtttacacccgcgaaatcagcgaaattgtagtggatggagaa
aacggctggaaggccgcgcgggacttcatgcggatgctgatgcctcagcacgcagaaaaa
gtccggctatggaacaaggaaaaccaacccctgttcacccactaccacgtggaagggcat
ctggatgccatgttctcccccgtggtgtctctgcgctctggcggttatctggttatcaac
cagacagaagccttggttgccattgacgtaaactcgggcaaagccaccagccaacgtaac
attgaagaaacggcgttccgcaccaatcaggaagctgctgatgaagtagcccgccagttg
cgcctgcgtgatctggctggcctgattgtaatcgacttcattgatatggagtctcgccgc
cataactccatgatcgaacgccgcctgaaagatgccttgcggcatgatcgggcacgtatc
cagattggctctatctcccatttcgggttgctggaaatgtcgcgccagcggctacgccca
tctgtagcagaagccgcctttatgccttgcccgcactgtaatggcacaggcatgatgcgc
agcattgaaagctctgccctgcatgttctgcgcgcagtggaagaagaaggtgcacgccgc
cgttcttccgccattaccgtgcatgttgctgcggatattgctttctacatcctaaacaac
aagcgggactggctgacccagatcgaacagcgccaccagatggaagtgctgtttgccgca
gacaatacgctgccagctccggaagttcggatcgaacgccgccagcatgcacgtccgcca
cggattcagccgccattgccgccggttgaaaacattgtggcagatgaggttgctgctgcc
acgccagaaattccggctgcagaaccttcttctattcaggaaactgccgatacttccgac
gagccacggcgtcggcgtcggcgtcggcgccgtcggcggaatgatcaggataccaatcag
gtatctgaaacacagacacagcctgatacagaaacaccagaaactgctgaaaccgcaccc
attgcagcgcctgaaaacgcggcagaacctgttgcagaagccgaagcagaaaccaatctg
gtgccgggccgacgcagaacccgccgctcccgtgtgcgcaaaccaactgaaacacgcacg
gaaatccatgtagatatcgaagaaggccccgcgccacggcccaatatgccagcatgggaa
ggcccaacaccggccaatccatttggcggtgcgccggacattttcgaacttctggaaaac
actgcccgccaacaggctgttgacattgcaccagcacctaaagcagctaacgtgcaggaa
gaagctgcaagcgtgccagtagaacccgccaaaacggaagaggttgcaccccagcccgtt
atggctgcaccggaagagcctgaaaaaacggaagaagcgcctaaaccgcgccgccgccgc
acacgcaagaaggtagaacccgcagcagaagaaaatgccgaacaggcagaaacatctgta
gccgcaccagaagcagaagctgcatcaacggaagcagaggcccccaaaaaacctgtgcgc
cgccgtgcaacccgccgcaaaacagcggcaaaggatgaggcaacagaagcggctgaagct
tctacagcggacactgccgaggaaaagccaaagaaaacaacccgtcggcgcaccactcgt
aaaaaggcagaaccagcctctactccagaagccgccagcggaagcgaagcagttgctact
tccgcacctaaagaggctgcatccgaagtttctgataaagaagaagctattgtccagcct
atcgtgatcgaagatagcccgccagcaacgcgcaggcgtaccggctggtggaaaaagtaa
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